| Acc# | Gene | Locus | DB | Organism | Product | Score | E-value | Identities | Positives | Gaps |
|---|---|---|---|---|---|---|---|---|---|---|
| P34761 | WHI3 | WHI3_YEAST | SP | Saccharomyces cerevisiae (Baker's yeast) | WHI3 protein. | 149 | 1e-34 | 85/144 (59%) | 92/144 (63%) | |
| Q07655 | WHI4 | TrEMBL | Saccharomyces cerevisiae (Baker's yeast) | Chromosome IV reading frame ORF YDL224C. | 138 | 3e-31 | 85/148 (57%) | 90/148 (60%) | 1/148 (0%) | |
| O74452 | SCW1 | SCW1_SCHPO | SP | Schizosaccharomyces pombe (Fission yeast) | Cell wall integrity protein scw1 (Strong cell wall protein 1). | 98.2 | 3e-19 | 56/124 (45%) | 66/124 (53%) | |
| O59784 | SPCC320.07C | TrEMBL | Schizosaccharomyces pombe (Fission yeast) | Putative rna-binding protein. | 90.5 | 7e-17 | 52/119 (43%) | 65/119 (54%) | ||
| Q8L5G3 | PRP3 | TrEMBL | Cicer arietinum (Chickpea) (Garbanzo) | Proline rich protein 3 (Fragment). | 68.2 | 4e-10 | 39/113 (34%) | 55/113 (48%) | ||
| Q9ASW4 | AT3G21215 | TrEMBL | Arabidopsis thaliana (Mouse-ear cress) | At3g21211 (At3g21211/At3g21211) (Hypothetical protein). | 67.8 | 5e-10 | 40/124 (32%) | 58/124 (46%) | ||
| Q9LU37 | TrEMBL | Arabidopsis thaliana (Mouse-ear cress) | Genomic DNA, chromosome 3, P1 clone: MXL8. | 52.8 | 2e-05 | 31/101 (30%) | 47/101 (46%) |
Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- rrm RNA recognition motif. (a.k.a. RRM, RBD, or 46.9 4.6e-10 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- rrm 1/1 548 631 .. 1 77 [] 46.9 4.6e-10
CDS Sequence
ATGGCCCAAT TTCATAGTAT TGTGCAGTCA AACGGACCAC CTCCGACACT TTCAGGTTCT CGTATATCAA CACAACAACA TAATATTCAA CAACAACCTG GCATGATTAA TACATCTTTT AATGGTAATC AACAAGTTGA TTCCAATATG ACTACTGGTT TATTAAAGAT TAGTAATTTA CCACCCGATT TAACTAGGAG AGAAGCAACA TTAATATTTG CCTTGGTAAT TGAAGAAATG TTAAGCATTG AAATTAAAGA TTATCAGATA TATGCTGTGT TCAAAAACAT CAATACTTGC ATTACTACTG GAAAACTACT CGATGGTAAG TACATATTTG GTACTGATTA CCCTCCTATT AAAGTTGAAT ACGAAAATAG CACATTGTTG GGATCACCAA CAAACATTTC TAGCACACAA TCTGCATTTA ATTCATTAAG GTTATCGGGA CCACCAAATA CCAACATTTC TCCACCTAAT CTTCCTCATT CACAATTACA ACATCAATCT TCAAGCAATT CAATTGACAA TGGAAACTCA AGTCTGACAG GCTCTTTTGA TATGCTTTCG AAACGGCAAT CTATTGGGAA CCAAAGATCT AGATTTGTTT TCAGTGATCC ATTTGCACAA GATCAACTGC AGCATCAACT GCATCAACAG CAGCAACAGC AGCAGCAACA ACAACAACAA CAACATCATC ATCATCATCA ACAACAAGAT CCACACGCAA AACAAGAAAT TATCGGCATT CAACCAGCAG GGTCTGGTCC CCCATCTGTG GGTCCTGCAC CTATTGGTCT TTCAGATATG AGTGGGAAGT CAATTTTATT GATGGAATCT CAAAATGATG CGAGAGAATA TGAAAATCTT GTTCGTGATT CATGGGGTCC AACACCAGGT AATTCTGGTG TTTCAGCTGT TTCAGCAAAT TCCCTGACAT CAGGTGTAGA CTGGAATGGT AATAGCAGTG CAAGTAATGG ATCAAATATA ATACAACAAC AACAGCAGCA GCAGCAGCAG CAGCAACCAC CACCGCCACA ACAGATACAA CCTGATCGTC GAAGAACTTC ATCATCAGCA TTTTTTAATG TTGCACCTGC ATTGCATACT ATGACTTCGA ATCAAAATAT ACCAAATACA CATTTGGGTC CAACTGCTGC TGGATTAAGA GCAATTTTAC AACAACCTGA AAACCAACCC CAACTGCATG ATTCCCAACT TCAAGCTCAT TCTCAACTGC AACTACAGTC TCAACTACAA AGTAAGACTC AACCTCAACC TCCACTGCAA CCCCAATCTC AATCGCAACT TCATATTCAA CAATCACAGG CACAACAGCA TCATCAACAA CAACAACAAC AACAACAACA ACAACCAAAC ACACAATCTC AAATTGCACC CCAAACATCG AATACTAGTT CAATTACGAA CGAGTTTCAT GCCCCACCTA ATATATCACA ACAATCTATT ACTTCTAATC AGAATACAAC ATCAACTTCC ACATCAACTC CAACTCAACA AGCCATTACG AGCCCGCTTG ATAAAGGGTC TACTTCATCA AAAGATGTTC CTGATTTATC ATTATTGGCA AGAGTCCCAC CTCCAGCAAA CCCTGCTGAT CAGAATCCGC CATGTAATAC TTTATATGTT GGTAATTTGC CACCCGATGC CACTGAATCT GAACTTCGAA CTTTATTTTC TCCACAAAAA GGGTTTAGAA GACTTTCATT TAGAACCAAG AATCAATCTT CTTCTAATAA TGGGACTGGC AGTGGCGGTG GTAGTGGTGG CGGTGGTGGT CATAGTCATG GACCAATGTG TTTTGTTGAA TTTGAAGATG TTGCTCATGC AACAAGAGCG TTGGCAGAAT TGTATGGTAG AGCATTACCA AGACCAAATG GTGGTAATGG GAAAGGTGGT ATTCGATTAT CATTTTCTAA GAATCCATTA GGAGTAAGAG GTCCAGGAAA TTCTAGAAGA ACATCTACTA ACCCTGCACC TAATGGGTTA TCACAATCTC AACAACAACA ACTGCTGCAA CTGCAACTGC AACTGCAACA ACAAGGAAGT AGTGGTGGTG GGAATTATGG ATACTCAAAT TATCATCAGA AATGA
AA Sequence
MAQFHSIVQS NGPPPTLSGS RISTQQHNIQ QQPGMINTSF NGNQQVDSNM TTGLLKISNL PPDLTRREAT LIFALVIEEM LSIEIKDYQI YAVFKNINTC ITTGKLLDGK YIFGTDYPPI KVEYENSTLL GSPTNISSTQ SAFNSLRLSG PPNTNISPPN LPHSQLQHQS SSNSIDNGNS SLTGSFDMLS KRQSIGNQRS RFVFSDPFAQ DQLQHQLHQQ QQQQQQQQQQ QHHHHHQQQD PHAKQEIIGI QPAGSGPPSV GPAPIGLSDM SGKSILLMES QNDAREYENL VRDSWGPTPG NSGVSAVSAN SLTSGVDWNG NSSASNGSNI IQQQQQQQQQ QQPPPPQQIQ PDRRRTSSSA FFNVAPALHT MTSNQNIPNT HLGPTAAGLR AILQQPENQP QLHDSQLQAH SQLQLQSQLQ SKTQPQPPLQ PQSQSQLHIQ QSQAQQHHQQ QQQQQQQQPN TQSQIAPQTS NTSSITNEFH APPNISQQSI TSNQNTTSTS TSTPTQQAIT SPLDKGSTSS KDVPDLSLLA RVPPPANPAD QNPPCNTLYV GNLPPDATES ELRTLFSPQK GFRRLSFRTK NQSSSNNGTG SGGGSGGGGG HSHGPMCFVE FEDVAHATRA LAELYGRALP RPNGGNGKGG IRLSFSKNPL GVRGPGNSRR TSTNPAPNGL SQSQQQQLLQ LQLQLQQQGS SGGGNYGYSN YHQK*