Chromosome 7

CaJ7.0032(CaO19.7098)

InitTermntaa
CDS 3381034454645216

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SPTrEMBL

Acc#GeneLocusDBOrganismProductScoreE-valueIdentitiesPositivesGaps
Q8XRZ2RSP0689TrEMBLRalstonia solanacearum (Pseudomonas solanacearum)Hypothetical protein RSp0689.1553e-3781/198 (40%)118/198 (59%)
Q9HWJ9PA4182TrEMBLPseudomonas aeruginosaHypothetical protein PA4182.1422e-3375/199 (37%)117/199 (58%)1/199 (0%)
Q98NS0MLL0013TrEMBLRhizobium loti (Mesorhizobium loti)Transcriptional regulator.1371e-3178/210 (37%)123/210 (58%)4/210 (1%)
Q88C40PP5343TrEMBLPseudomonas putida (strain KT2440)Transcriptional regulator, putative.1317e-3068/193 (35%)110/193 (56%)
Q87U10PSPTO5505TrEMBLPseudomonas syringae (pv. tomato)Transcriptional regulator, putative.1293e-2970/203 (34%)109/203 (53%)
P36087YKL070WYKH0_YEASTSPSaccharomyces cerevisiae (Baker's yeast)Hypothetical 19.8 kDa protein in STB6-NUP100 intergenic region.1131e-2468/172 (39%)100/172 (58%)19/172 (11%)
Q98A31MLR6176TrEMBLRhizobium loti (Mesorhizobium loti)Transcriptional regulator.1123e-2469/195 (35%)97/195 (49%)2/195 (1%)
Q8KJJ0MSI121TrEMBLRhizobium loti (Mesorhizobium loti)Putative transcriptional regulator protein.1123e-2469/195 (35%)98/195 (50%)2/195 (1%)
Q81YH8PAIB-2TrEMBLBacillus anthracis (strain Ames)Protease synthase and sporulation negative regulatory protein PAI 2.92.44e-1859/197 (29%)100/197 (50%)
P21341PAIBPAIB_BACSUSPBacillus subtilisProtease synthase and sporulation negative regulatory protein PAI 2.91.38e-1857/196 (29%)99/196 (50%)
Q9PBU7XF2038TrEMBLXylella fastidiosaTranscriptional regulator.90.12e-1756/194 (28%)94/194 (48%)1/194 (0%)
Q81NE0PAIB-1TrEMBLBacillus anthracis (strain Ames)Protease synthase and sporulation negative regulatory protein PAI 2.85.16e-1653/193 (27%)94/193 (48%)
Q9KFR5PAIBTrEMBLBacillus haloduransTranscriptional repressor of sporulation and degradative enzymes production.82.83e-1557/182 (31%)95/182 (52%)2/182 (1%)
Q84B80ORFC669-3TrEMBLVibrio fischeriOrfc669-3.80.51e-1464/214 (29%)100/214 (46%)4/214 (1%)
Q9RTS3DR1683TrEMBLDeinococcus radioduransTranscriptional regulator, putative.79.33e-1454/193 (27%)93/193 (48%)
Q8PAC8PAIBTrEMBLXanthomonas campestris (pv. campestris)Transcriptional regulator protein Pai2.72.83e-1245/200 (22%)93/200 (46%)
Q8PM19PAIBTrEMBLXanthomonas axonopodis (pv. citri)Transcriptional regulator protein Pai2.65.16e-1041/196 (20%)91/196 (46%)1/196 (0%)
Q89M36BLR4357TrEMBLBradyrhizobium japonicumBlr4357 protein.58.94e-0841/161 (25%)77/161 (47%)4/161 (2%)
Q89MG2BLR4231TrEMBLBradyrhizobium japonicumBlr4231 protein.52.83e-0646/170 (27%)72/170 (42%)1/170 (0%)

Pfam

Scores for sequence family classification (score includes all domains):

Model    Description                                    Score    E-value  N 

-------- -----------                                    -----    ------- ---

Neg_reg  Negative transcriptional regulator             171.7    1.2e-47   1



Parsed for domains:

Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value

-------- ------- ----- -----    ----- -----      -----  -------

Neg_reg    1/1       4   174 ..     1   190 []   171.7  1.2e-47




CDS Sequence

ATGTATATTC CAAAAAAATA CTTGCAAGAA GATTGGGAAC AGGTGGAATA CTTGATTAAA 
AACTATCCCT TAGCAACAGT TGTCACCAAT GACGAAAACG GAACAATTAT TGCTAATCAC 
ATCCCCTTTG TTTTGAAAGA AGATCCTGAA TCGGGTAAGA AATACTTGAT TGCCCATATC 
GCAAAGACAA ATCATCAAGT TCCAACTTTA GCTGATTCCG ATAACGTCTT GGTGATTTTC 
CAATCGGCTG ATTCCTATAT AACTCCAAAT TACTACCCAG GAAAACCAGA AACCCACAAA 
TACGTGCCAA CATGGGATTT TGCTTGTGTT CACATTTACG GAAGCTCTAA AATAATCGAT 
AATTTTGATT TTGTGAGAAG TCAAATCACC CACTTGACTG ATCAACAAGA AGCCGGTAAG 
CCCGATAGCT GGAAAGTTTC AGATGCTCCT GAAAAATATT TGAAAGTAAT GCAAAAAGCT 
ATTGCGGGCC TCCAAATCGA AATAAAGTCC ACTCAGTGCA AGTACAAGTT TGAGCAAGAT 
ATGAAAAGTG CAGATATTCA AGGGGTTGTT GATGGTTTAC AAAAGGATGG TAAAAGTCAA 
ATGTCTAATT TTGTTAAAGA GTCTAATCTT ACAAAAATAG GGTAG

AA Sequence

MYIPKKYLQE DWEQVEYLIK NYPLATVVTN DENGTIIANH IPFVLKEDPE SGKKYLIAHI 
AKTNHQVPTL ADSDNVLVIF QSADSYITPN YYPGKPETHK YVPTWDFACV HIYGSSKIID 
NFDFVRSQIT HLTDQQEAGK PDSWKVSDAP EKYLKVMQKA IAGLQIEIKS TQCKYKFEQD 
MKSADIQGVV DGLQKDGKSQ MSNFVKESNL TKIG*