| Acc# | Gene | Locus | DB | Organism | Product | Score | E-value | Identities | Positives | Gaps |
|---|---|---|---|---|---|---|---|---|---|---|
| P25569 | YCL039W | YCD9_YEAST | SP | Saccharomyces cerevisiae (Baker's yeast) | Hypothetical 86.0 kDa Trp-Asp repeats containing protein in GLK1-SRO9 intergenic region. | 88.6 | 3e-16 | 110/535 (20%) | 198/535 (37%) | 33/535 (6%) |
| Q9FNN2 | AT5G08560 | TrEMBL | Arabidopsis thaliana (Mouse-ear cress) | WD-repeat protein-like. | 87.4 | 6e-16 | 50/183 (27%) | 95/183 (51%) | ||
| Q9FND4 | TrEMBL | Arabidopsis thaliana (Mouse-ear cress) | WD-repeat protein-like. | 78.2 | 4e-13 | 51/184 (27%) | 92/184 (50%) | 1/184 (0%) | ||
| Q9UT85 | SPAC343.04C | TrEMBL | Schizosaccharomyces pombe (Fission yeast) | WD repeat protein. | 69.7 | 1e-10 | 54/192 (28%) | 86/192 (44%) | 8/192 (4%) | |
| Q8VDZ6 | 1600024A01RIK | TrEMBL | Mus musculus (Mouse) | 1600024A01Rik protein (Fragment). | 68.2 | 4e-10 | 53/183 (28%) | 79/183 (43%) | ||
| Q8C4F3 | 1600024A01RIK | TrEMBL | Mus musculus (Mouse) | Hypothetical Trp-Asp. | 68.2 | 4e-10 | 53/183 (28%) | 79/183 (43%) | ||
| Q86UY4 | TrEMBL | Homo sapiens (Human) | Hypothetical protein (Fragment). | 68.2 | 4e-10 | 53/184 (28%) | 80/184 (43%) | 1/184 (0%) | ||
| Q8C6G8 | 1600024A01RIK | TrEMBL | Mus musculus (Mouse) | Hypothetical Trp-Asp. | 68.2 | 4e-10 | 53/183 (28%) | 79/183 (43%) | ||
| Q9H7D7 | TrEMBL | Homo sapiens (Human) | Hypothetical protein FLJ21016. | 68.2 | 4e-10 | 53/184 (28%) | 80/184 (43%) | 1/184 (0%) | ||
| Q8YZ23 | ALL0664 | TrEMBL | Anabaena sp. (strain PCC 7120) | WD-40 repeat protein. | 65.9 | 2e-09 | 100/483 (20%) | 180/483 (37%) | 45/483 (9%) | |
| Q871I3 | B16M17.040 | TrEMBL | Neurospora crassa | Hypothetical protein B16M17.040. | 63.2 | 1e-08 | 55/190 (28%) | 91/190 (47%) | 7/190 (3%) | |
| Q9VP21 | CG7611 | TrEMBL | Drosophila melanogaster (Fruit fly) | CG7611 protein (LP01609p). | 57.8 | 5e-07 | 36/133 (27%) | 59/133 (44%) | ||
| Q8Z020 | ALL0283 | TrEMBL | Anabaena sp. (strain PCC 7120) | WD-40 repeat protein. | 56.2 | 2e-06 | 55/226 (24%) | 99/226 (43%) | 36/226 (15%) | |
| Q93ZU7 | MRH10.1/AT5G43920 | TrEMBL | Arabidopsis thaliana (Mouse-ear cress) | Putative WD-repeat protein. | 54.3 | 6e-06 | 27/97 (27%) | 48/97 (49%) | ||
| Q9D7H2 | WDR5B | TrEMBL | Mus musculus (Mouse) | 2310009C03Rik protein. | 52.8 | 2e-05 | 31/130 (23%) | 58/130 (44%) | ||
| Q9M2Z2 | T16K5.10 | TrEMBL | Arabidopsis thaliana (Mouse-ear cress) | Putative WD-40 repeat-protein. | 52.4 | 2e-05 | 41/195 (21%) | 86/195 (44%) | 1/195 (0%) | |
| Q8I3S4 | PFE0930W | TrEMBL | Plasmodium falciparum (isolate 3D7) | Hypothetical protein, conserved. | 52.0 | 3e-05 | 49/196 (25%) | 78/196 (39%) | 14/196 (7%) | |
| Q8Z019 | ALL0284 | TrEMBL | Anabaena sp. (strain PCC 7120) | WD-40 repeat protein. | 52.0 | 3e-05 | 116/554 (20%) | 191/554 (34%) | 109/554 (19%) | |
| Q93847 | K04G11.4 | YZLL_CAEEL | SP | Caenorhabditis elegans | Hypothetical 43.1 kDa Trp-Asp repeats containing protein K04G11.4 IN chromosome X. | 50.8 | 7e-05 | 34/137 (24%) | 58/137 (42%) | |
| Q8YZL9 | ALL0438 | TrEMBL | Anabaena sp. (strain PCC 7120) | Serine/threonine kinase with WD-40 repeat. | 50.8 | 7e-05 | 51/198 (25%) | 77/198 (38%) | 34/198 (17%) | |
| Q9C270 | B18D24.40 | PWP2_NEUCR | SP | Neurospora crassa | Periodic tryptophan protein 2 homolog. | 50.4 | 9e-05 | 50/195 (25%) | 82/195 (42%) | 2/195 (1%) |
| Q8DLK2 | TLR0489 | TrEMBL | Synechococcus elongatus (Thermosynechococcus elongatus) | WD-40 repeat protein. | 50.4 | 9e-05 | 52/195 (26%) | 87/195 (44%) | 1/195 (0%) |
Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- WD40 WD domain, G-beta repeat 104.4 2.2e-27 6 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- WD40 1/6 265 302 .. 1 38 [] 37.7 2.7e-07 WD40 2/6 328 365 .. 1 38 [] 26.3 0.00072 WD40 3/6 377 437 .. 1 38 [] 9.6 14 WD40 4/6 575 609 .. 1 38 [] 4.8 54 WD40 5/6 622 667 .. 1 38 [] 6.4 35 WD40 6/6 672 718 .. 1 38 [] 26.2 0.00076
CDS Sequence
atgacactcg atgaattgaa attgcaattg attgttaaat cattacatga attaggttgt gatcaactag caactgaatt aatatctcaa ctcagacaga ctaattcatt ggatcaacaa cctggggatg aattacacaa ttggattttg gaacaactac gaataagaaa ttatactgaa ttagatgatt atttttgtag tttgttgaat gacacaaacg gtttaaatga atttgtcaaa attatcaact atcgaggtga taatatggat tcaattatat caatattatt gtatttgatc agaagagcaa attatcttga tgtgattaaa cttctggata gtttaactga caccgaaagg ttgacctacg tcaacaacaa attgttaccg ttattagact gcgttgacgt tggcaataat aagatagaag acatcagtag cgttatagat gtacgaatct tgcaacaatt gtcaaaagaa aaggaatcaa aattgttaat ggacagtaat catgccattg agcaatatct ttttcaatta ccaatagata gtattcattc attgaatcaa tttatatttg ataaattgtt taatggttcc attttcaatc ttttaactac agattcatta gccaacactc ctgacttggc aactattatt caacaagcag ctaaatatca acaatctcag tcaccatttt atttaccacc aagaacaaaa caagaacgga aaaaggcccc tttaccactt ccactgaaac gatttcatga taattttaat ggcaatacca ctactttatt gcacaccctc acttatcata aagacgaagt ttggtttgtc aaattctctc catcaggaaa atttttagtt actggttcat tagatgggag attggtgttg tatgatgtat taaataattt ccagttgatt aaagttttgg aaccaactat ggcggcagac aatactgcct ttagtccaat atcaactaga cccactctga gcaagaataa caaagcagtt atttattgtt gctgggatcc taaggaacag tatattgtca gttgttgttt agatacggtg attcgtgttt ggtcagttgg ggatatccac aaaagaagaa tcactcgaag tgaaaccaat actataactg attataaatt aattacatgt tttactttgg ccccagatat taaaacttgg acttgtgaat ttttaccaga aaataggaaa ctatccggtg atttaagtgg acaatcagat tcacctcaat tcattgtggg gtcgcctgat aaggttttga aaatatttga ttgtaatggt attgaattgt ttgattttta tggcaatata gaggatgaag atgaacgtga aaatgaacag agtaaccaga accaagatga tcaccttgct ttgaaaccaa acttgcaaca acaacagcaa ccactgcttg catcatcgac atcaacatca tcccaatcac atgggcagac tacttctacc actgccgaag aagcaaataa acacgatgac atttcaatga aagatacaga tgaatcaata cccagagtcc gaacatataa aaccagcctt gaaagcaatt tcaatcgaat caatgattta gtaatcacta ataatggcaa gatcttaatc actttaaatg atcatcaatt acatttttat actgtccctg acactttagg cgaagaagca actacacgtc gtatctgtaa catccatttc aaaggacgtc ttacatcttg ttcaatttct cataatggta aatatttatt aataagttct gccccagaag aattacaagt atgggatttg tcaccattac ttgtcaatga aagtaatcga ccaattttgt atcgtaaata tcttggacat actcaaagtt catatattgt tcgatcaaca ttgggttatt tgaatgaaga taatgatcaa gaagaattgg tattaactgg aagtgatcat ggatacattt atttttggaa gtttactact ggtcaattga ttacaagaat caaaggacac gtagggttat gtaatggggt tgattggaat agaaatggaa tggttattaa aggtaaagat tatgggaaaa tctgggccag tgttggtgat gataaattgg tgaaaatttg gggttccaaa tga
AA Sequence
MTLDELKLQL IVKSLHELGC DQLATELISQ LRQTNSLDQQ PGDELHNWIL EQLRIRNYTE LDDYFCSLLN DTNGLNEFVK IINYRGDNMD SIISILLYLI RRANYLDVIK LLDSLTDTER LTYVNNKLLP LLDCVDVGNN KIEDISSVID VRILQQLSKE KESKLLMDSN HAIEQYLFQL PIDSIHSLNQ FIFDKLFNGS IFNLLTTDSL ANTPDLATII QQAAKYQQSQ SPFYLPPRTK QERKKAPLPL PLKRFHDNFN GNTTTLLHTL TYHKDEVWFV KFSPSGKFLV TGSLDGRLVL YDVLNNFQLI KVLEPTMAAD NTAFSPISTR PTLSKNNKAV IYCCWDPKEQ YIVSCCLDTV IRVWSVGDIH KRRITRSETN TITDYKLITC FTLAPDIKTW TCEFLPENRK LSGDLSGQSD SPQFIVGSPD KVLKIFDCNG IELFDFYGNI EDEDERENEQ SNQNQDDHLA LKPNLQQQQQ PLLASSTSTS SQSHGQTTST TAEEANKHDD ISMKDTDESI PRVRTYKTSL ESNFNRINDL VITNNGKILI TLNDHQLHFY TVPDTLGEEA TTRRICNIHF KGRLTSCSIS HNGKYLLISS APEELQVWDL SPLLVNESNR PILYRKYLGH TQSSYIVRST LGYLNEDNDQ EELVLTGSDH GYIYFWKFTT GQLITRIKGH VGLCNGVDWN RNGMVIKGKD YGKIWASVGD DKLVKIWGSK *