| Acc# | Gene | Locus | DB | Organism | Product | Score | E-value | Identities | Positives | Gaps |
|---|---|---|---|---|---|---|---|---|---|---|
| P32579 | SUA5 | SUA5_YEAST | SP | Saccharomyces cerevisiae (Baker's yeast) | SUA5 protein. | 400 | e-110 | 235/404 (58%) | 278/404 (68%) | 42/404 (10%) |
| O94530 | SPCC895.03C | TrEMBL | Schizosaccharomyces pombe (Fission yeast) | Similarity to yeast translation initiation protein Sua5p. | 372 | e-102 | 206/382 (53%) | 261/382 (68%) | 28/382 (7%) | |
| Q9UYB2 | PYRAB15960 | TrEMBL | Pyrococcus abyssi | SUA5 related protein. | 263 | 4e-69 | 150/319 (47%) | 205/319 (64%) | 1/319 (0%) | |
| O73972 | PH0435 | TrEMBL | Pyrococcus horikoshii | Hypothetical protein PH0435. | 252 | 7e-66 | 146/334 (43%) | 208/334 (62%) | ||
| Q9K6F8 | BH3771 | TrEMBL | Bacillus halodurans | Hypothetical protein BH3771. | 251 | 9e-66 | 151/320 (47%) | 203/320 (63%) | 2/320 (0%) | |
| Q8Y4B0 | LMO2541 | TrEMBL | Listeria monocytogenes | Hypothetical protein lmo2541. | 247 | 2e-64 | 148/341 (43%) | 205/341 (60%) | 13/341 (3%) | |
| Q927V2 | LIN2685 | TrEMBL | Listeria innocua | Hypothetical protein lin2685. | 246 | 3e-64 | 146/331 (44%) | 202/331 (61%) | 3/331 (0%) | |
| Q8U3Z4 | PF0306 | TrEMBL | Pyrococcus furiosus | Sua5 superfamily-related protein. | 245 | 6e-64 | 145/332 (43%) | 205/332 (61%) | ||
| Q814U4 | BC5325 | TrEMBL | Bacillus cereus (strain ATCC 14579 / DSM 31) | SUA5 protein. | 244 | 1e-63 | 145/330 (43%) | 199/330 (60%) | 2/330 (0%) | |
| Q9UX54 | SSO0664 | TrEMBL | Sulfolobus solfataricus | Hypothetical SUA5 related protein SSO0664. | 239 | 5e-62 | 148/324 (45%) | 202/324 (62%) | 8/324 (2%) | |
| Q81JX5 | BA5568 | TrEMBL | Bacillus anthracis (strain Ames) | Sua5/yciO/yrdC/ywlC family protein. | 239 | 3e-62 | 145/330 (43%) | 197/330 (59%) | 2/330 (0%) | |
| P39153 | YWLC | YWLC_BACSU | SP | Bacillus subtilis | Hypothetical protein ywlC. | 237 | 2e-61 | 147/351 (41%) | 206/351 (58%) | 3/351 (0%) |
| Q898Y2 | CTC00305 | TrEMBL | Clostridium tetani | SUA5 protein. | 230 | 3e-59 | 132/319 (41%) | 196/319 (61%) | 3/319 (0%) | |
| Q8RD96 | SUA5 | TrEMBL | Thermoanaerobacter tengcongensis | Putative translation factor (Sua5). | 228 | 8e-59 | 135/341 (39%) | 204/341 (59%) | 2/341 (0%) | |
| Q970S6 | ST1526 | TrEMBL | Sulfolobus tokodaii | Hypothetical protein ST1526. | 228 | 8e-59 | 144/342 (42%) | 202/342 (59%) | 4/342 (1%) | |
| Q8EM64 | OB2994 | TrEMBL | Oceanobacillus iheyensis | Hypothetical conserved protein. | 224 | 2e-57 | 134/318 (42%) | 193/318 (60%) | ||
| Q97F70 | CAC2882 | TrEMBL | Clostridium acetobutylicum | Predicted translation factor (SUA5). | 221 | 1e-56 | 135/338 (39%) | 196/338 (57%) | 5/338 (1%) | |
| Q88UT4 | LP_2376 | TrEMBL | Lactobacillus plantarum | SUA5 family translation factor (Putative). | 219 | 6e-56 | 136/344 (39%) | 184/344 (53%) | 15/344 (4%) | |
| Q9WZV6 | TM0852 | TrEMBL | Thermotoga maritima | Hypothetical protein TM0852. | 218 | 1e-55 | 150/367 (40%) | 200/367 (54%) | 3/367 (0%) | |
| Q831F8 | EF2552 | TrEMBL | Enterococcus faecalis (Streptococcus faecalis) | Sua5/YciO/YrdC/YwlC family protein. | 218 | 8e-56 | 128/323 (39%) | 182/323 (56%) | 5/323 (1%) | |
| Q8XIC1 | CPE2200 | TrEMBL | Clostridium perfringens | Hypothetical protein CPE2200. | 213 | 5e-54 | 136/354 (38%) | 200/354 (56%) | 5/354 (1%) | |
| Q978U4 | TV1321 | TrEMBL | Thermoplasma volcanium | Hypothetical protein TV1321. | 211 | 2e-53 | 130/326 (39%) | 191/326 (58%) | 2/326 (0%) | |
| Q9Y988 | APE2397 | TrEMBL | Aeropyrum pernix | 367AA long hypothetical SUA5 protein. | 211 | 1e-53 | 134/341 (39%) | 181/341 (53%) | 13/341 (3%) | |
| Q8CRN1 | SE1713 | TrEMBL | Staphylococcus epidermidis | Conserved hypothetical protein. | 205 | 9e-52 | 128/330 (38%) | 191/330 (57%) | 4/330 (1%) | |
| Q8ZU26 | PAE2978 | TrEMBL | Pyrobaculum aerophilum | Sua5 family protein. | 202 | 6e-51 | 121/329 (36%) | 183/329 (55%) | 1/329 (0%) | |
| Q8STM6 | ECU09_1610 | TrEMBL | Encephalitozoon cuniculi | Hypothetical protein ECU09_1610. | 201 | 1e-50 | 127/330 (38%) | 181/330 (54%) | 6/330 (1%) | |
| Q8NVG7 | MW2040 | TrEMBL | Staphylococcus aureus (strain MW2) | Hypothetical protein MW2040. | 198 | 9e-50 | 126/340 (37%) | 184/340 (54%) | 5/340 (1%) | |
| Q9HLC7 | TA0302 | TrEMBL | Thermoplasma acidophilum | Sua5 related protein. | 197 | 2e-49 | 127/340 (37%) | 185/340 (54%) | 2/340 (0%) | |
| Q99SE2 | SAV2116 | TrEMBL | Staphylococcus aureus (strain N315) | Hypothetical protein SAV2116. | 196 | 6e-49 | 123/331 (37%) | 179/331 (54%) | 4/331 (1%) | |
| Q8KBR8 | CT1715 | TrEMBL | Chlorobium tepidum | SUA5/YciO/YrdC family protein. | 194 | 2e-48 | 126/327 (38%) | 179/327 (54%) | 1/327 (0%) |
Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Sua5_yciO_yrdC yrdC domain 227.8 1.6e-64 1 SUA5 SUA5 domain 161.1 2e-44 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Sua5_yciO_yrdC 1/1 47 228 .. 1 191 [] 227.8 1.6e-64 SUA5 1/1 230 378 .. 1 164 [] 161.1 2e-44
CDS Sequence
atgcttctgt ttactctacg aagagccatg tcatttacaa ccagaatatt aaaagtcaga cccgaaagca tacagtttgt gaatgataaa cctcagatct ccgacaatga aaccttgata aacttagaaa ttgctgccaa agaacttaca actacacata atgccatagg gttcccaaca gaaacggtgt atggacttgc tgggtctgca ttatctgatg aatcagtcaa atctatatac aaagctaaaa acagaccggc agataaccct ttgattgtac atatatcatc gatcgaacaa ttaaaacgca aattgatcaa ttatgaaata ccacaagtct accttgattt aatttcccat ttttggcctg gtccgttaac cattctcttg cccataacca aagatagtcc gatatcaaaa ttggtaactg ccaaccaaga tacgtttgcg gtgagaatgc caaatcaccc agttgcacga gccttgattg caatgagtga tacaccaatt gctgcccctt cagctaatgc atcaaccaga cctagtccga cattggcaga gcatgtttac cacgatctaa atggtaaaat acctttgatt ttggatggtg gcgcatgcaa tgtaggtgtt gaaagtacgg ttattgacgg gttagttgac ccaccaatgc tattgcgacc aggaggtgtt tcattagagg acattaaacg cgtcggtggc aaactatggg aaaacattgt tgtggcgaaa aagacagcag gaaaattaga gccagtaaag acaccaggga tgaaatatcg acattattca ccaacagcaa aagtggtact atttgtcaat tgtggagatg gtataaatgc cattgaaaat tatttgacca acaataaagt agatgccagt accaccaaga tagcgttgtt gaaatcgaaa cactttggcg aggatcaccc acactttatt attaaaagac taggcactac agggaatgag atatctcata atttgtttaa atacttgaga gaagtggatg aagaggacaa ggtggaattg atatttgtcg aagggataga cgaaacaaac gaaggactag cggtcatgaa tcgattaagc aaagctgcta tggaagtagt taatggaggg gaggcatag
AA Sequence
MLLFTLRRAM SFTTRILKVR PESIQFVNDK PQISDNETLI NLEIAAKELT TTHNAIGFPT ETVYGLAGSA LSDESVKSIY KAKNRPADNP LIVHISSIEQ LKRKLINYEI PQVYLDLISH FWPGPLTILL PITKDSPISK LVTANQDTFA VRMPNHPVAR ALIAMSDTPI AAPSANASTR PSPTLAEHVY HDLNGKIPLI LDGGACNVGV ESTVIDGLVD PPMLLRPGGV SLEDIKRVGG KLWENIVVAK KTAGKLEPVK TPGMKYRHYS PTAKVVLFVN CGDGINAIEN YLTNNKVDAS TTKIALLKSK HFGEDHPHFI IKRLGTTGNE ISHNLFKYLR EVDEEDKVEL IFVEGIDETN EGLAVMNRLS KAAMEVVNGG EA*