Chromosome 7

CaJ7.0047(CaO19.7084)

InitTermntaa
CDS 57377560581320441

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Acc#GeneLocusDBOrganismProductScoreE-valueIdentitiesPositivesGaps

No hits above score 50


Pfam

Scores for sequence family classification (score includes all domains):

Model      Description                                  Score    E-value  N 

--------   -----------                                  -----    ------- ---

CsbD       CsbD-like                                    -14.2        4.2   1

ATP-synt_B ATP synthase B/B' CF(0)                      -72.6        9.8   1

E-MAP-115  E-MAP-115 family                             -95.7        2.7   1

S-antigen  S-antigen protein                           -271.4        2.6   1



Parsed for domains:

Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value

--------   ------- ----- -----    ----- -----      -----  -------

CsbD         1/1     204   257 ..     1    53 []   -14.2      4.2

ATP-synt_B   1/1     177   312 ..     1   155 []   -72.6      9.8

E-MAP-115    1/1     170   332 ..     1   193 []   -95.7      2.7

S-antigen    1/1     175   373 ..     1   650 []  -271.4      2.6




CDS Sequence

atgttttctc cattctacaa cggtgattat tcctacgacc aaccaatcga tttcgagtcg 
cttttcgatt tgttgcatca acatcaattc tactataaag aaaacacccg tccaagagtc 
attaaaaagt tagaaaccga ggacgagttc caaattcaaa tttataaacc atacggaaac 
tacaacaatt atgaagtgaa tgttgttaaa tccaatcctc ctattgtcaa tgtcgttatc 
agctccgtcc aagacaattt caaaaccgtt ttgccattca atgtcaacta tattgatatt 
gataatatca attggcaatg gtacaagcaa caaaacgtat tggtattgaa catacccaag 
agaatccatt atgttcatct gaatgttcaa gatatcctca attgcttgtt aggctgcaat 
gatgctgatg ctagtagtgc tttgaaagcc ccaaaccaac agccatatgc taaaccacaa 
actaagaagg atgtccaagc caagaccagt cctaaaaaga aggaagaatt tgccaaagtg 
aagaaagaaa ttgccaacaa caacaacaat aaccttgcta gtcgtgatgc caatcttaaa 
gactcaattg aagaacatga aaatttaatt gaacaggctg caaacgcttt aaaacaagcc 
acagaaaatt cttccaaaca agtgaaacag gatttgaatg gcaaggctaa cgcattgagt 
gctggtgctc aagctgctgc tgaggctaaa cacaaggaag cattagaaaa aactaaacaa 
gaacttgaag ctcaaagaaa agctgcccat gataagattg tcaaggctca acaagagctt 
gaagagattg ccagaaagga agctgaagct gtaaagttac atgaagctgc aaaacaaaaa 
gaattagaag aagaaaaacg caaggtcgaa gcggaacaac aaaaagcaaa ggaaaaagaa 
gacttggaac aaaaggagta cgatcaattt gttaaacaac aacaagaatt ccttaaacaa 
tttttcgggt ttaatttagg accagctatc cccactaaag atggtgccaa tgctttttac 
actgctgcta aacaagccaa aaaacaaaag ccaaaagtag caccaaaacc aaaacagttg 
caaactcaac cagttaagca agcaaaagat gaagaggaat ccattccttc tgagccggaa 
acagaagaac ctgaatcttc taaatcacac aactcaaatg aaaacttaca taagcatcct 
tctttagagg aggttgagga cgaggagtct gtaatgttta gaaaaagatt tggtcattag 

AA Sequence

MFSPFYNGDY SYDQPIDFES LFDLLHQHQF YYKENTRPRV IKKLETEDEF QIQIYKPYGN 
YNNYEVNVVK SNPPIVNVVI SSVQDNFKTV LPFNVNYIDI DNINWQWYKQ QNVLVLNIPK 
RIHYVHLNVQ DILNCLLGCN DADASSALKA PNQQPYAKPQ TKKDVQAKTS PKKKEEFAKV 
KKEIANNNNN NLASRDANLK DSIEEHENLI EQAANALKQA TENSSKQVKQ DLNGKANALS 
AGAQAAAEAK HKEALEKTKQ ELEAQRKAAH DKIVKAQQEL EEIARKEAEA VKLHEAAKQK 
ELEEEKRKVE AEQQKAKEKE DLEQKEYDQF VKQQQEFLKQ FFGFNLGPAI PTKDGANAFY 
TAAKQAKKQK PKVAPKPKQL QTQPVKQAKD EEESIPSEPE TEEPESSKSH NSNENLHKHP 
SLEEVEDEES VMFRKRFGH*