| Acc# | Gene | Locus | DB | Organism | Product | Score | E-value | Identities | Positives | Gaps |
|---|---|---|---|---|---|---|---|---|---|---|
| P53064 | RTF1 | RTF1_YEAST | SP | Saccharomyces cerevisiae (Baker's yeast) | RTF1 protein. | 229 | 1e-58 | 160/530 (30%) | 264/530 (49%) | 11/530 (2%) |
| O94667 | SPBC651.09C | TrEMBL | Schizosaccharomyces pombe (Fission yeast) | Conserved hypothetical protein, may be involved in transcriptional regulation. | 135 | 2e-30 | 110/406 (27%) | 180/406 (44%) | 7/406 (1%) | |
| Q96BX6 | TrEMBL | Homo sapiens (Human) | Hypothetical protein. | 94.4 | 4e-18 | 85/424 (20%) | 175/424 (41%) | 16/424 (3%) | ||
| Q92541 | KIAA0252 | TrEMBL | Homo sapiens (Human) | Hypothetical protein KIAA0252 (Fragment). | 94.4 | 4e-18 | 85/424 (20%) | 175/424 (41%) | 16/424 (3%) | |
| Q8RWR3 | TrEMBL | Arabidopsis thaliana (Mouse-ear cress) | At1g61040/T7P1_17. | 90.9 | 4e-17 | 109/452 (24%) | 188/452 (41%) | 21/452 (4%) | ||
| Q9C950 | T7P1.17 | TrEMBL | Arabidopsis thaliana (Mouse-ear cress) | Hypothetical protein. | 90.9 | 4e-17 | 109/452 (24%) | 188/452 (41%) | 21/452 (4%) | |
| Q9W261 | CG10955 | TrEMBL | Drosophila melanogaster (Fruit fly) | CG10955 protein. | 83.2 | 9e-15 | 72/329 (21%) | 154/329 (46%) | 1/329 (0%) | |
| P90845 | F25B3.6 | TrEMBL | Caenorhabditis elegans | F25B3.6 protein. | 73.2 | 9e-12 | 83/434 (19%) | 162/434 (37%) | 17/434 (3%) |
Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Plus-3 Plus-3 domain 67.8 2.4e-16 1 Upf2 Up-frameshift suppressor 2 -63.4 5.2 1 Sas10_Utp3 Sas10/Utp3 family -181.7 0.52 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Plus-3 1/1 250 359 .. 1 114 [] 67.8 2.4e-16 Upf2 1/1 182 370 .. 1 202 [] -63.4 5.2 Sas10_Utp3 1/1 193 530 .. 1 585 [] -181.7 0.52
CDS Sequence
ATGTCTGATT TAGAAGATGA TTTACTTGCT TTAGCAGGTG GAGAAGATAA CACCTATGAA TCAGATGAAG AAATCACCAG TTCCAAAAGG AAACCCATTG TTGCAGATGA TTATAATGAA GATGATGATG AAGATACAGT ATTATCCAAA CGTCGTAGAG TTGAATCTGG AGATGATGAT GATTATGAAC CACAACAACC ACAACAAGGG GAAGAAGAAG AAGGAGAAGA ATTTCAAGAG AATGAATTGA TTGATCCATA TCCATTAGAA GGTAAATATA AAGATGAAGC TGATCGTGAA GCTTTAGATA ATATGGATGA AATGGAAAGA GAACAAATTT TATTTGAAAG AATGCAAGAA ATGGATAAAT ATAGAGAACG GAAATATTTA CAAGAAAGAA TGAAACAACA ACAACAACAA CAAAAGAATG TTGTTGGAAG AATTGAACCT ACTAGATCTT CAGGAAGATC AAAAACAGGA TTAAAACCAG CTAAAAAAGA TAAATTGACT GAATTAAGAA AACAACGTGC ACAACATTCT AAAAGAAAAT CAAGAAGAGA AGCAGATTAT GCCGAAGGTT CAGAAGATGA AGAAGATGAA GATGACAAGG AACCAGAAGA AGAAGAAGAA GAGGATGACG ATGAAGAAGG ATTCGAGGAA GATTATTATG ATGATTATGA TGGAACTGTT GCTTGGGGAG GTCCATCTAA AGTTAAAAAG AAGAGATCTA CAGAATTAGC CAAATTAGAA GATATTAATC GTATAAAAGT GGGGAGAACT ATTTTGACTC AATATTGTTT CCATTCAGGA TTCGAAGATA CGATAGTCGA TACTTTTGGG AAAATCAATT TAGGTATGGA TAGATCTACT CGACAACCAA TTTATAGAAT GGTCAAAATA ATTGATGTGA AATCACGACC AGAACGAGCA TATAAATTGG GTCATTCCAA TTTTGATATT TTTTTAACTG TGAGTCAAAA TAAGGATCAA AAAAGGGATT CCCCGATGTC GATTTTTTCT GATTCGCCAA TTAATCAAGA TGAATTTGAT AGATATTTAA AAGAATTGAA TAAAACTGAT GAAATGATTG AATTTTTGGA TGATGTGAAT TCTAAATTTG ATGAATTGAC AAAATTCTAT AGTAAAGGAT TAACTGATAA AGATATTAAT GATATGATTG CTAGAAAACA AAAAATTCAA GAAAAAAAAG GTAATATCAG TATGTATGAT GCTGTTAATA GGAAAACCAA TTTATTGGAT CGATTGAAAA TTGCTAAACA ACAAGGCAAT TTAGAAAAAG TTCAAGAAAT CATTGAGAAA TTAAAAGATA TTGATGAAAT TTTAGAATCA CAAACATCTA ATCAACCAAC TTCAAAATCA TTAAATACTA TGACATTAGT TAATGAAAGA AATCGGAAAT TGAATTCTAC AAACATTAGA AAAGCAGAAA TTAAATTCAA ATCAACAGCT GCTCAACAAC AATCCGATGG TGATCCGTTT TCTCGTTTGA AAACCGCCAC AAGAATGTTT TATCAAGATT TAATTAATCA AGAAAATGAA AAGGCATTAA AAAATGTTAA TATGCAACAA ATGATCGATG AAAAAACTGA GAATGAAGCC AAAATTGCTA AATCAACTTA TCGAGATCTT GGAGAAATGG ATAAATTAAT AAAAACAATT GATTTTGATT TTGAATTGGC AGTATAA
AA Sequence
MSDLEDDLLA LAGGEDNTYE SDEEITSSKR KPIVADDYNE DDDEDTVLSK RRRVESGDDD DYEPQQPQQG EEEEGEEFQE NELIDPYPLE GKYKDEADRE ALDNMDEMER EQILFERMQE MDKYRERKYL QERMKQQQQQ QKNVVGRIEP TRSSGRSKTG LKPAKKDKLT ELRKQRAQHS KRKSRREADY AEGSEDEEDE DDKEPEEEEE EDDDEEGFEE DYYDDYDGTV AWGGPSKVKK KRSTELAKLE DINRIKVGRT ILTQYCFHSG FEDTIVDTFG KINLGMDRST RQPIYRMVKI IDVKSRPERA YKLGHSNFDI FLTVSQNKDQ KRDSPMSIFS DSPINQDEFD RYLKELNKTD EMIEFLDDVN SKFDELTKFY SKGLTDKDIN DMIARKQKIQ EKKGNISMYD AVNRKTNLLD RLKIAKQQGN LEKVQEIIEK LKDIDEILES QTSNQPTSKS LNTMTLVNER NRKLNSTNIR KAEIKFKSTA AQQQSDGDPF SRLKTATRMF YQDLINQENE KALKNVNMQQ MIDEKTENEA KIAKSTYRDL GEMDKLIKTI DFDFELAV*