Chromosome 7

CaJ7.0011(CaO19.7116)

InitTermntaa
CDS 74766523954319

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SPTrEMBL

Acc#GeneLocusDBOrganismProductScoreE-valueIdentitiesPositivesGaps
P38439LEO1LEO1_YEASTSPSaccharomyces cerevisiae (Baker's yeast)LEO1 protein.1056e-2292/331 (27%)147/331 (44%)31/331 (9%)
Q9VNE6ATUTrEMBLDrosophila melanogaster (Fruit fly)ATU protein (LD30655p).98.21e-1972/246 (29%)122/246 (49%)14/246 (5%)
Q94546ATUTrEMBLDrosophila melanogaster (Fruit fly)ANOTHER transcription UNIT protein (ATU).98.21e-1972/246 (29%)122/246 (49%)14/246 (5%)
Q8WVC0
TrEMBLHomo sapiens (Human)Hypothetical protein.97.82e-1977/251 (30%)131/251 (52%)13/251 (5%)
Q9P6R2SPBC13E7.08CTrEMBLSchizosaccharomyces pombe (Fission yeast)Hypothetical coiled-coil protein.94.42e-1878/309 (25%)142/309 (45%)19/309 (6%)
Q17431B0035.11TrEMBLCaenorhabditis elegansHypothetical 48.1 kDa protein B0035.11 in chromosome IV.85.59e-1655/189 (29%)94/189 (49%)8/189 (4%)
Q9FNQ0AT5G61150TrEMBLArabidopsis thaliana (Mouse-ear cress)Genomic DNA, chromosome 5, P1 clone:MAF19 (Hypothetical protein).75.59e-1357/228 (25%)107/228 (46%)9/228 (3%)
Q8L5W5VIP4TrEMBLArabidopsis thaliana (Mouse-ear cress)VERNALIZATION independence 4.74.32e-1259/233 (25%)109/233 (46%)15/233 (6%)
Q8LIM6OJ1567_G09.14TrEMBLOryza sativa (japonica cultivar-group)OJ1567_G09.14 protein (P0585H11.30 protein).66.25e-1064/230 (27%)106/230 (46%)22/230 (9%)
Q8I1G1CG10887TrEMBLDrosophila erecta (Fruit fly)CG10887-PA.65.11e-0964/250 (25%)108/250 (43%)28/250 (11%)
Q9VDP7CG10887TrEMBLDrosophila melanogaster (Fruit fly)CG10887 protein.62.86e-0958/235 (24%)104/235 (44%)19/235 (8%)
Q8I139CG10887TrEMBLDrosophila willistoni (Fruit fly)CG10887-PA.60.53e-0847/205 (22%)98/205 (47%)12/205 (5%)

Pfam

Scores for sequence family classification (score includes all domains):

Model     Description                                   Score    E-value  N 

--------  -----------                                   -----    ------- ---

Leo1      Leo1-like protein                              25.1    2.7e-09   1

E-MAP-115 E-MAP-115 family                             -102.7        6.6   1



Parsed for domains:

Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value

--------  ------- ----- -----    ----- -----      -----  -------

Leo1        1/1       3   303 ..     1   377 []    25.1  2.7e-09

E-MAP-115   1/1     196   318 ..     1   193 []  -102.7      6.6




CDS Sequence

atgtccgatg aagagataga tgatttgttt ggggaagaaa ctaccgaaaa gatagttgat 
ttgtcgttac cgcgccatgc agttgtgctg gttatggaaa aggatgtgag gttattgaag 
acaccagact ttttaaacat cgaagcacac ccatttgacc cttcgagttt caaagaacag 
atagaaagca ataataaagt acgacgtgag agggggttga ctgctaagga aatccacaac 
gagcagatga cagagaagtt gttgaacgaa aacacgatca gatggaggta ccataatgcg 
ggcaatgacg agattgtcaa gcagtctaat gcccattttg tggaatggag tgatggatcg 
gtatcgttaa aagtgggtaa tgaagtgtat gatgtgaggg aattgcccat gtttgatcat 
ttattggtga agagccacca agcagctgaa gttttgcaag ccgactcgat actttccaag 
tcgattaatc ttttgccggc atcgtcgagt catagaaaga ttcttgttaa gaatatcacc 
aagaaagaaa agatcttgaa taccattacc gatgttgatc cgttggagaa gcagcgactt 
gcagacgaag atgtgcgtaa ggccatgaag atgaaacgac aaatggagtc gagaagaaga 
ttacaggaag agaagtggga gagaagcggt agtcctagag cacaagaaag ttcatatgaa 
aggtttgaac gaacctatga gggtgagggg tatgatgaga atgatgattt tgttgctggc 
gatgaagaag agattgaaga gtatgaggag gaagaggagt ttgagcgcgg agcagagagg 
ctaacccaac tcaaagaaga aggtgctgcc aagtaccgaa gacactctga agacgaggat 
gaggatgaga aaacccggaa aagaagaaga attattgatt ctgatgaaga gtga

AA Sequence

MSDEEIDDLF GEETTEKIVD LSLPRHAVVL VMEKDVRLLK TPDFLNIEAH PFDPSSFKEQ 
IESNNKVRRE RGLTAKEIHN EQMTEKLLNE NTIRWRYHNA GNDEIVKQSN AHFVEWSDGS 
VSLKVGNEVY DVRELPMFDH LLVKSHQAAE VLQADSILSK SINLLPASSS HRKILVKNIT 
KKEKILNTIT DVDPLEKQRL ADEDVRKAMK MKRQMESRRR LQEEKWERSG SPRAQESSYE 
RFERTYEGEG YDENDDFVAG DEEEIEEYEE EEEFERGAER LTQLKEEGAA KYRRHSEDED 
EDEKTRKRRR IIDSDEE*