Chromosome 7

CaJ7.0098(CaO19.7034)

InitTermntaa
CDS 1598081575022307770

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Acc#GeneLocusDBOrganismProductScoreE-valueIdentitiesPositivesGaps

No hits above score 50


Pfam

Scores for sequence family classification (score includes all domains):

Model      Description                                  Score    E-value  N 

--------   -----------                                  -----    ------- ---

Drf_FH1    Formin Homology Region 1                     -31.0        3.6   1

Extensin_2 Extensin-like region                        -128.7       0.69   1

CD2        T-cell surface antigen CD2 protein          -200.8        3.8   1



Parsed for domains:

Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value

--------   ------- ----- -----    ----- -----      -----  -------

CD2          1/1     207   518 ..     1   438 []  -200.8      3.8

Extensin_2   1/1     361   742 ..     1   374 []  -128.7     0.69

Drf_FH1      1/1     589   756 ..     1   161 []   -31.0      3.6




CDS Sequence

atgtcaagta atatgaatcc aatgttggca gatccatcaa ttgttataat tgctgataat 
gattcaacaa cgaaatcaat atctcaacac ccaaccacca ctaccaccac cacaacaaca 
actacaagaa cttcatctgt tcatagttta gatccgagta atgccttatc aaaattatta 
gattcagcaa ttgctcatgc agcaagagaa tcaactccag aagttaatga atttgaattt 
gatcaacaaa aaactaatat caacaatctt aataatgatg atgatgatga cgacgacgac 
gatgacaaag tatttattaa ttcaatccca ccttcaaaac aaggaaataa taaaatttat 
actattaaat atttattatc tacacgtaat gaaattcaac caattgatgt taatgataaa 
ttacccgata aatcattttg gagattagga aaatctcgat ctaatgatgg tggtggtggc 
ggtggtagtg gtggtaatac caatagtggc acatataaga agaaaggtag acgaggtgct 
aattataatg aaacttggga aagaaaaaac agtactagta gtggatcagg acgtgatcgt 
catggtagcg acagacattt aggatttaat agatcttttg aattggatca attatcaaat 
gataaaatat ctcaattatt aggtgagcaa gaaaatgaat tagaaactcc tgaatgggat 
gatgttggga atttttctga atcatcaaat aaatacaata ataaagagac taataatggc 
ggattaatga atatgggtca aaccgttgaa gattttgaaa aatggaaata tcaaatgaaa 
ttacaagaac gaagaaaaaa tggtgaagtg attgatgaag aaaatgaaga attaaatact 
gatactaatg ctgctgctgt tcatgctggt aatgaagttg ataatttttt ctcatttgta 
actcaagatc aagttaatga taatattgat aatggaggaa tcaaagataa tgaaactaat 
ttcaaacaaa gtaatgaaca atcacataat gataatgata aacctcatcg atcatcaaga 
ttttcatcat ttttccacca accaaaagaa attccaagtc cagcaactac tacaatcacc 
acaactatcc aacctcaatc tcaacctcaa cctcaacaat taagtagtgg tcaaccaaca 
ccaaatagta cacaaccacc gccgggattt tcacactttt ttggaggtcc gccaccacca 
ccaccaccgc aaccccaacc attaccacag ctgggtcctt catcaacatc aacacatact 
caagatctag gtccaaatca aggtcaaggt cagcaatttt tcccacctcc atcacaacaa 
cagcaacaac aacaacaaca acaacaacaa ccaacacaac caacacaacc accccatatt 
ttacaaagac aaggctcttc tatttcatca caaggttcaa ctacaggtcc accgccacaa 
ccacaaccgc cacaaccacc aacacaacta ccagtgggag cagcttccaa tgacaatttc 
ttcatgtcat tactcagtaa aaaagaacca acaaatagta cttcaaactc tgctgcatct 
acacctgctg ctaatgtcaa tatttctaat ttagcaaata caccaggaaa gcaacaaagt 
caaatagttc aacctgatag taataataac aacagttcta gttcaagaaa agaaccacag 
gcattacaag gtgttcctca aggaccacaa ccaccaccac caccatttca acaacaacaa 
catcatcaac aatttcaaca accaatgtat tcacaattcc ctcctcaaca aataccacca 
aatcaattac caccttggat gagaggtggt ccattaccac ctcatctaca aggtaaaggg 
ttcccacctc cgccaccacc accaggattt atcaacaaac aaccgccaca aaatcagaat 
cagaatcaaa gtcaaggcca aaactcgaat caaaattctg atcaacaaca acaacaacaa 
caacaacaaa gacttccgcc tccaggaata ttcccacctg gttatatgcc tggtccacca 
accggatcta atttcatgcc tcccccactt tcccagcaac aacagcaaca acaatttgtt 
aataatccca atgctagatt tggtccacca cctccattta tgggtatgcc attaccacca 
catttagcaa gaccagaagc tgctgttcaa aatcaacaaa ataggcctca atctcagtct 
caacaaggtg gacaaccaca accataa

AA Sequence

MSSNMNPMLA DPSIVIIADN DSTTKSISQH PTTTTTTTTT TTRTSSVHSL DPSNALSKLL 
DSAIAHAARE STPEVNEFEF DQQKTNINNL NNDDDDDDDD DDKVFINSIP PSKQGNNKIY 
TIKYLLSTRN EIQPIDVNDK LPDKSFWRLG KSRSNDGGGG GGSGGNTNSG TYKKKGRRGA 
NYNETWERKN STSSGSGRDR HGSDRHLGFN RSFELDQLSN DKISQLLGEQ ENELETPEWD 
DVGNFSESSN KYNNKETNNG GLMNMGQTVE DFEKWKYQMK LQERRKNGEV IDEENEELNT 
DTNAAAVHAG NEVDNFFSFV TQDQVNDNID NGGIKDNETN FKQSNEQSHN DNDKPHRSSR 
FSSFFHQPKE IPSPATTTIT TTIQPQSQPQ PQQLSSGQPT PNSTQPPPGF SHFFGGPPPP 
PPPQPQPLPQ LGPSSTSTHT QDLGPNQGQG QQFFPPPSQQ QQQQQQQQQQ PTQPTQPPHI 
LQRQGSSISS QGSTTGPPPQ PQPPQPPTQL PVGAASNDNF FMSLLSKKEP TNSTSNSAAS 
TPAANVNISN LANTPGKQQS QIVQPDSNNN NSSSSRKEPQ ALQGVPQGPQ PPPPPFQQQQ 
HHQQFQQPMY SQFPPQQIPP NQLPPWMRGG PLPPHLQGKG FPPPPPPPGF INKQPPQNQN 
QNQSQGQNSN QNSDQQQQQQ QQQRLPPPGI FPPGYMPGPP TGSNFMPPPL SQQQQQQQFV 
NNPNARFGPP PPFMGMPLPP HLARPEAAVQ NQQNRPQSQS QQGGQPQP*