Chromosome 7

CaJ7.0013(CaO19.7115)

InitTermntaa
CDS 913675831554519

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SPTrEMBL

Acc#GeneLocusDBOrganismProductScoreE-valueIdentitiesPositivesGaps
P17121SAC7SAC7_YEASTSPSaccharomyces cerevisiae (Baker's yeast)GTPase-activating protein SAC7.2421e-62145/310 (46%)181/310 (58%)1/310 (0%)
O74335SPBC17F3.01CTrEMBLSchizosaccharomyces pombe (Fission yeast)RhoGAP GTPase activating protein (Fragment).1322e-2964/122 (52%)88/122 (72%)
Q12128BAG7TrEMBLSaccharomyces cerevisiae (Baker's yeast)YOR3320W from chromosome XV.1237e-2766/174 (37%)102/174 (58%)3/174 (1%)
O43182ARHGAP6RHG6_HUMANSPHomo sapiens (Human)Rho-GTPase-activating protein 6 (Rho-type GTPase-activating protein RhoGAPX-1).67.07e-1034/90 (37%)56/90 (62%)
Q8C842ARHGAP6TrEMBLMus musculus (Mouse)Rho GTPase activating protein 6.66.21e-0934/90 (37%)56/90 (62%)
Q8BG83ARHGAP6TrEMBLMus musculus (Mouse)Rho GTPase activating protein 6.66.21e-0934/90 (37%)56/90 (62%)
O54834ARHGAP6RHG6_MOUSESPMus musculus (Mouse)Rho-GTPase-activating protein 6 (Rho-type GTPase-activating protein RhoGAPX-1).66.21e-0934/90 (37%)56/90 (62%)
Q8N264
TrEMBLHomo sapiens (Human)Hypothetical protein FLJ33877.63.58e-0934/83 (40%)53/83 (63%)1/83 (1%)
Q9H0T6DKFZP564B1162TrEMBLHomo sapiens (Human)Hypothetical protein.63.58e-0934/83 (40%)53/83 (63%)1/83 (1%)
Q86TI5
TrEMBLHomo sapiens (Human)Similar to RIKEN cDNA 0610025G21 gene.63.58e-0934/83 (40%)53/83 (63%)1/83 (1%)
Q8QZZ00610025G21RIKTrEMBLMus musculus (Mouse)Hypothetical protein.63.21e-0833/83 (39%)53/83 (63%)1/83 (1%)
Q8CA500610025G21RIKTrEMBLMus musculus (Mouse)Hypothetical protein (Fragment).63.21e-0833/83 (39%)53/83 (63%)1/83 (1%)
Q9Z1N3MYO9ATrEMBLRattus norvegicus (Rat)Myosin-RhoGAP protein, Myr 7.62.42e-0830/83 (36%)52/83 (62%)
Q8BYW1A130039I20RIKTrEMBLMus musculus (Mouse)Hypothetical RhoGAP domain/pleckstrin homology.62.42e-0832/84 (38%)54/84 (64%)1/84 (1%)
Q9UNJ2
TrEMBLHomo sapiens (Human)Myosin-IXa.62.42e-0830/83 (36%)52/83 (62%)
Q8C1704732465J09RIKTrEMBLMus musculus (Mouse)Myosin-IXA homolog.62.42e-0830/83 (36%)52/83 (62%)
Q8C0U04732465J09RIKTrEMBLMus musculus (Mouse)Myosin-IXA homolog.62.42e-0830/83 (36%)52/83 (62%)
Q9NTG2DKFZP434F1016TrEMBLHomo sapiens (Human)Hypothetical protein (Fragment).62.42e-0830/83 (36%)52/83 (62%)
Q9NUY2
TrEMBLHomo sapiens (Human)Hypothetical protein FLJ11061.62.42e-0830/83 (36%)52/83 (62%)
Q9V4C2RHOGAP102ATrEMBLDrosophila melanogaster (Fruit fly)CG1748-PA.62.02e-0837/92 (40%)52/92 (56%)
Q8C4V10610025G21RIKTrEMBLMus musculus (Mouse)Hypothetical protein.61.63e-0832/83 (38%)53/83 (63%)1/83 (1%)
Q8BL80B230341L19RIKTrEMBLMus musculus (Mouse)Hypothetical RhoGAP domain/pleckstrin homology.60.85e-0832/83 (38%)53/83 (63%)1/83 (1%)
P42331KIAA0053Y053_HUMANSPHomo sapiens (Human)Hypothetical protein KIAA0053.60.85e-0832/84 (38%)52/84 (61%)1/84 (1%)
Q8IXQ2
TrEMBLHomo sapiens (Human)Similar to KIAA0053 gene product.60.85e-0832/84 (38%)52/84 (61%)1/84 (1%)
Q9P107GMIPTrEMBLHomo sapiens (Human)Gem-interacting protein.60.19e-0831/85 (36%)49/85 (57%)1/85 (1%)
Q9NRY4GRLF1GRLF_HUMANSPHomo sapiens (Human)Glucocorticoid receptor DNA binding factor 1 (Glucocorticoid receptor repression factor 1) (GRF-1) (Rho GAP p190A) (p190-A).59.71e-0740/153 (26%)69/153 (45%)
P81128GRLF1GRLF_RATSPRattus norvegicus (Rat)Glucocorticoid receptor DNA binding factor 1 (GAP-associated protein p190).59.71e-0740/153 (26%)69/153 (45%)
P83509GRLF1GRLF_CANFASPCanis familiaris (Dog)Glucocorticoid receptor DNA binding factor 1 (Rho GAP p190A) (p190-A).59.32e-0739/153 (25%)69/153 (45%)
Q80Z68ARHGAP4TrEMBLMus musculus (Mouse)Rho GTPase-activating protein p115 splice form 1.57.84e-0733/83 (39%)47/83 (56%)3/83 (3%)
Q8BM00A530015A20RIKTrEMBLMus musculus (Mouse)Protein with CHARACTERISTICS of A RHOGAP homolog (Fragment).57.84e-0733/83 (39%)47/83 (56%)3/83 (3%)

Pfam

Scores for sequence family classification (score includes all domains):

Model    Description                                    Score    E-value  N 

-------- -----------                                    -----    ------- ---

RhoGAP   RhoGAP domain                                  177.7    1.9e-49   1



Parsed for domains:

Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value

-------- ------- ----- -----    ----- -----      -----  -------

RhoGAP     1/1     215   467 ..     1   159 []   177.7  1.9e-49




CDS Sequence

atggtcttgt ccaacgaatc gttaccgcat gtaagtgata acgagaatga ttccaagagt 
cccatgagca cgtctccacc gcagaatata cctataccac aaaacccatc gttatttcac 
aatccccatc aacaaccatc gacaccgtcg ggcaatagtt atttgaatgc tgtgcatagc 
ggtattagcc gtgttcgatc aaactcactc aacccatcag aaaccagtgt gcgccagcaa 
aatgtatatt ttggagtgac attagataat gctttagtac aaggttttgc caagatatcg 
atattgggta ccgacaacaa ccctgacggg ttgaactacg gcaagattcc aatagtcgtt 
gccaaatgtg gtgtttattt gaagaaaaat gggttgaccg ttgaaggaat atttagagtt 
ggcgggtcgt cgaaacggtt aaaagaattg cagataatct tcaacacgcc acctgatttt 
ggcaagaaac taaattggga ggggtatact gttcatgatg cagccacgat tttgaggagg 
tatttgaatg cattaccaga acccttgata ccactagaga tgtatgaagt tttccgtgac 
ccgctcagaa ataggagcag gataatcaat tatatgaagt ataaggcagc agttgctaca 
tcgagtatca gcagtcccaa cccgcacacc gccagagcaa atggcaacaa caacaacaac 
tcgtatttcc ccgatatgag ccagcctcta actgaagcca atatcggcaa gttgaatcac 
gatattgccc cacgaaagaa ttctgaatca tcgtccaatg tattttcgca gagtgcgcca 
atgccattaa gtgaagagga agtcaacacc aagagcaaga agaagtcaaa gagctataag 
aagttgacta atgatatcca cgaagccatt gacgagtata aacttctagt gaacgagtta 
cccttggcat cgaagcagtt gcttttctac attttggact tgctttccat ggtgcaagca 
caatcgaaag agaatttaat gaattcaaga aaccttgcgg cgattttcca gccatcgatt 
ttatcacacc cgaaccacga tatggacccg gtggagtatg cattgtcaca ggctgtggtt 
gagtttctta taaagtactc gtataaattg ttgcccacca cagtgtctgc cagtcccgct 
gtaaagtcgc cggttgctgc tcgcgacgaa agcgatgtga catctaccag tactacacca 
ctaaatgaag aatcacactt gtcaaaagag aattacccac atcgcgagtc ggtgacttct 
gaaccccaag atagtctagt ggcgggattc cagcataatg tgacaggatc gattcccttt 
gattcagata tagagagtga tattggttct gacttagatg atttgaattt ccagcaacta 
aagttgaatg atgggtcccc agttaaatca agcccgccgc cagcgccaca aatgcctgca 
gctatagtag tttctccgcc gtcgtcgctg tccgttcacc aactggataa gtaa

AA Sequence

MVLSNESLPH VSDNENDSKS PMSTSPPQNI PIPQNPSLFH NPHQQPSTPS GNSYLNAVHS 
GISRVRSNSL NPSETSVRQQ NVYFGVTLDN ALVQGFAKIS ILGTDNNPDG LNYGKIPIVV 
AKCGVYLKKN GLTVEGIFRV GGSSKRLKEL QIIFNTPPDF GKKLNWEGYT VHDAATILRR 
YLNALPEPLI PLEMYEVFRD PLRNRSRIIN YMKYKAAVAT SSISSPNPHT ARANGNNNNN 
SYFPDMSQPL TEANIGKLNH DIAPRKNSES SSNVFSQSAP MPLSEEEVNT KSKKKSKSYK 
KLTNDIHEAI DEYKLLVNEL PLASKQLLFY ILDLLSMVQA QSKENLMNSR NLAAIFQPSI 
LSHPNHDMDP VEYALSQAVV EFLIKYSYKL LPTTVSASPA VKSPVAARDE SDVTSTSTTP 
LNEESHLSKE NYPHRESVTS EPQDSLVAGF QHNVTGSIPF DSDIESDIGS DLDDLNFQQL 
KLNDGSPVKS SPPPAPQMPA AIVVSPPSSL SVHQLDK*