| Acc# | Gene | Locus | DB | Organism | Product | Score | E-value | Identities | Positives | Gaps |
|---|---|---|---|---|---|---|---|---|---|---|
| P11746 | MCM1 | MCM1_YEAST | SP | Saccharomyces cerevisiae (Baker's yeast) | Pheromone receptor transcription factor (GRM/PRTF protein). | 124 | 1e-27 | 61/110 (55%) | 80/110 (72%) | |
| O42725 | UMC1 | TrEMBL | Ustilago maydis (Smut fungus) | MADS-box homolog Umc1. | 117 | 1e-25 | 59/103 (57%) | 74/103 (71%) | ||
| O76853 | SRFA | TrEMBL | Dictyostelium discoideum (Slime mold) | SRF related protein. | 114 | 2e-24 | 59/108 (54%) | 69/108 (63%) | ||
| P07249 | ARGR1 | ARG1_YEAST | SP | Saccharomyces cerevisiae (Baker's yeast) | Arginine metabolism regulation protein I. | 97.8 | 1e-19 | 51/110 (46%) | 67/110 (60%) | |
| Q9U613 | SRF | TrEMBL | Artemia sanfranciscana (Brine shrimp) (Artemia franciscana) | Serum response factor. | 97.4 | 2e-19 | 65/186 (34%) | 82/186 (44%) | 29/186 (15%) | |
| Q9XYR1 | SRF | TrEMBL | Junonia coenia (Peacock butterfly) (Precis coenia) | Serum response factor (Fragment). | 96.7 | 3e-19 | 49/102 (48%) | 60/102 (58%) | ||
| Q9W182 | BS | TrEMBL | Drosophila melanogaster (Fruit fly) | BS gene product (RE17834p). | 94.7 | 1e-18 | 56/130 (43%) | 70/130 (53%) | 13/130 (10%) | |
| Q24535 | BS | SRF_DROME | SP | Drosophila melanogaster (Fruit fly) | Serum response factor homolog (dSRF) (Blistered protein). | 94.7 | 1e-18 | 56/130 (43%) | 70/130 (53%) | 13/130 (10%) |
| Q9JM73 | SRF | TrEMBL | Mus musculus (Mouse) | Serum response factor (Srf protein). | 94.7 | 1e-18 | 53/113 (46%) | 64/113 (56%) | 2/113 (1%) | |
| Q7ZUA3 | TrEMBL | Brachydanio rerio (Zebrafish) (Danio rerio) | Hypothetical protein. | 94.4 | 1e-18 | 47/91 (51%) | 56/91 (61%) | |||
| P11831 | SRF | SRF_HUMAN | SP | Homo sapiens (Human) | Serum response factor (SRF). | 94.4 | 1e-18 | 47/91 (51%) | 56/91 (61%) | |
| P23790 | SRF_XENLA | SP | Xenopus laevis (African clawed frog) | Serum response factor (SRF). | 94.4 | 1e-18 | 47/91 (51%) | 56/91 (61%) | ||
| Q9YH93 | SRF | TrEMBL | Brachydanio rerio (Zebrafish) (Danio rerio) | Serum response factor. | 94.4 | 1e-18 | 47/91 (51%) | 56/91 (61%) | ||
| O62543 | TrEMBL | Geodia cydonium (Sponge) | Serum response factor. | 94.0 | 2e-18 | 47/99 (47%) | 60/99 (60%) | |||
| Q18955 | D1081.2 | TrEMBL | Caenorhabditis elegans | D1081.2 protein. | 93.2 | 3e-18 | 49/109 (44%) | 66/109 (60%) | 5/109 (4%) | |
| Q964I0 | SRF | TrEMBL | Hydra attenuata (Hydra) (Hydra vulgaris) | Serum response factor. | 92.4 | 5e-18 | 46/86 (53%) | 55/86 (63%) | ||
| Q90718 | SRF | SRF_CHICK | SP | Gallus gallus (Chicken) | Serum response factor (SRF) (Fragment). | 92.4 | 5e-18 | 46/87 (52%) | 55/87 (63%) | |
| Q8SUU7 | ECU07_1740 | TrEMBL | Encephalitozoon cuniculi | MADS domain. | 72.8 | 4e-12 | 39/91 (42%) | 56/91 (61%) | ||
| P78926 | MAP1 | MAP1_SCHPO | SP | Schizosaccharomyces pombe (Fission yeast) | Pheromone receptor transcription activator (MAP1 protein). | 64.3 | 1e-09 | 43/133 (32%) | 63/133 (47%) | 3/133 (2%) |
| Q27339 | MEF-2 | TrEMBL | Caenorhabditis elegans | CEMEF-2. | 55.8 | 5e-07 | 36/112 (32%) | 54/112 (48%) | 2/112 (1%) | |
| Q9U325 | W10D5.1 | TrEMBL | Caenorhabditis elegans | W10D5.1 protein. | 55.8 | 5e-07 | 36/112 (32%) | 54/112 (48%) | 2/112 (1%) | |
| Q964H9 | SRF | TrEMBL | Hydractinia echinata (Snail fur) | Serum response factor (Fragment). | 55.1 | 9e-07 | 28/57 (49%) | 34/57 (59%) | ||
| Q40767 | DAL3 | TrEMBL | Picea abies (Norway spruce) (Picea excelsa) | DAL3 protein. | 51.2 | 1e-05 | 28/85 (32%) | 42/85 (49%) | 4/85 (4%) | |
| Q9SEE1 | DAL12 | TrEMBL | Picea abies (Norway spruce) (Picea excelsa) | MADS-box transcription factor. | 50.1 | 3e-05 | 30/90 (33%) | 44/90 (48%) | ||
| Q9SEE0 | DAL12 | TrEMBL | Picea abies (Norway spruce) (Picea excelsa) | MADS-box transcription factor. | 50.1 | 3e-05 | 30/90 (33%) | 44/90 (48%) |
Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SRF-TF SRF-type transcription factor (DNA-binding a 96.7 4.7e-25 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SRF-TF 1/1 66 116 .. 1 51 [] 96.7 4.7e-25
CDS Sequence
atggctatta aagaagaaac aaatgaattt agtcaaggta atgaggggaa ttcccattca accaataaca acaataacag caacaacagc aacagcaaca acaatgctga tgtttctgca ccagtagatg atgacgatga tgacgatggt acttctcaag gtaaaactca aaaggaaaga agaaaaattg agatcaaatt cattcaagaa aaatcaagac gtcatattac tttttcgaaa agaaaagctg ggattatgaa gaaagcttat gaattatcag tattgacagg tactcaagtg ttattattag ttgtttcaga aactggtttg gtttatactt ttaccactcc taaattacaa cctttggtca ctaaatctga agggaagaat ttgattcaag catgtttgaa tgctcctgaa gaaggattgg gtgatgatca agagaatcaa agtgatggaa atacaggaga ttcacctgat caaagccctg ctccagcaac caatccaaat gtcatgggtg ctgcaggtca tgctcatcac attcaacaac aacaacagca acaacaacaa gctcaacagc aagctcagca acaaatggca ccaatgcctt ctcatggttt acctacacat tattccaatc ctcaaggagc tggtaatcct ggtgtacctc ctcaacaaca aggtcaacat caacctggta ttccattaca aggtggttat agtgatcaat acctgtattt tggtaatatt caaaataaca acatacctaa tcaacagcaa tatcaatga
AA Sequence
MAIKEETNEF SQGNEGNSHS TNNNNNSNNS NSNNNADVSA PVDDDDDDDG TSQGKTQKER RKIEIKFIQE KSRRHITFSK RKAGIMKKAY ELSVLTGTQV LLLVVSETGL VYTFTTPKLQ PLVTKSEGKN LIQACLNAPE EGLGDDQENQ SDGNTGDSPD QSPAPATNPN VMGAAGHAHH IQQQQQQQQQ AQQQAQQQMA PMPSHGLPTH YSNPQGAGNP GVPPQQQGQH QPGIPLQGGY SDQYLYFGNI QNNNIPNQQQ YQ*