| Acc# | Gene | Locus | DB | Organism | Product | Score | E-value | Identities | Positives | Gaps |
|---|---|---|---|---|---|---|---|---|---|---|
| P51998 | YML025C | RL4P_YEAST | SP | Saccharomyces cerevisiae (Baker's yeast) | Putative L4P like ribosomal protein. | 163 | 3e-39 | 103/265 (38%) | 137/265 (51%) | 25/265 (9%) |
| O74801 | SPBC2D10.08C | TrEMBL | Schizosaccharomyces pombe (Fission yeast) | L4p-like ribosomal protein, mitochodrial. | 90.5 | 2e-17 | 68/230 (29%) | 112/230 (48%) | 5/230 (2%) | |
| O17005 | T23B12.2 | TrEMBL | Caenorhabditis elegans | Hypothetical protein. | 58.2 | 1e-07 | 41/145 (28%) | 66/145 (45%) | ||
| Q8EUB4 | MYPE10170 | TrEMBL | Mycoplasma penetrans | Ribosomal protein L4. | 57.4 | 2e-07 | 39/151 (25%) | 72/151 (47%) | 1/151 (0%) | |
| P49665 | RPLD | RL4_THETH | SP | Thermus thermophilus | 50S ribosomal protein L4. | 55.8 | 6e-07 | 34/101 (33%) | 50/101 (49%) | |
| Q9EVT8 | RPL4 | TrEMBL | Thermus thermophilus | Ribosomal protein L4. | 55.8 | 6e-07 | 34/101 (33%) | 50/101 (49%) | ||
| Q9ZI49 | RPLD | RL4_AQUPY | SP | Aquifex pyrophilus | 50S ribosomal protein L4. | 53.9 | 2e-06 | 48/197 (24%) | 83/197 (42%) | 1/197 (0%) |
| O66432 | RPLD | RL4_AQUAE | SP | Aquifex aeolicus | 50S ribosomal protein L4. | 52.8 | 5e-06 | 29/102 (28%) | 51/102 (50%) | |
| Q9A8V2 | CC1249 | TrEMBL | Caulobacter crescentus | Ribosomal protein L4. | 51.6 | 1e-05 | 34/104 (32%) | 57/104 (54%) | 2/104 (1%) | |
| P38516 | RPLD | RL4_THEMA | SP | Thermotoga maritima | 50S ribosomal protein L4. | 50.8 | 2e-05 | 29/99 (29%) | 48/99 (48%) | |
| Q89J85 | RPLD | TrEMBL | Bradyrhizobium japonicum | 50S ribosomal protein L4. | 50.8 | 2e-05 | 31/102 (30%) | 57/102 (55%) | 2/102 (1%) | |
| Q9BYD3 | MRPL4 | TrEMBL | Homo sapiens (Human) | Mitochondrial ribosomal protein L4 (L4mt). | 50.1 | 3e-05 | 30/101 (29%) | 51/101 (50%) | ||
| Q9BW07 | TrEMBL | Homo sapiens (Human) | Similar to CGI-28 protein. | 50.1 | 3e-05 | 30/101 (29%) | 51/101 (50%) |
Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds]
CDS Sequence
ATGTTCAAAC AATCCATACG TAGTCTAGCT ACCAAGTCAC CAATTTCAAG TGCTGCTGCC ACGACCACCA CCGCTAGTAC CACCAGCACT ACCACCACAG CTTCCTTGAA TTTTGCAAAA CCACCATCTT ATACATTAGC TCAATTACGT GAATTCCCAA GTTTAGAACC AAAAACATTT ATTCCATTAC CAACGACATT TTTCAACACC GAAAAACCTA TTCGTAGAGA TATATTATGG AGTTGTGTTA CATATGAAGC CGATAAGGCC CGAGTAGGAT CAAATTATGC AATTTTAAAA TCGGATTCAC CTTATTCTAA TCGTAAATTA CGTCCTCAAA AAGGTTCAGG TCGTGCTCGT TTAGGTGATG CCAATTCTCC ACATATGGAT AATGAAATTA AAGCTCATGC TATAAAGGGA CCTCATGATT GGAGTACTGA TTTACCTAGT AAAATATATT CTCGTGGTAT TCAAAATGCT TTTACTATGC ATTATAAACA AGGAAATTTA AATGTTGTTG AAAATGAATT AGATTTCCAA TATGGATATG ATATTATAAC TCAACTGTTT GTTTCAGTGC ATAATTTGAA TAAATTGAAT TTATTATTTA TAACTAATGA ACCAAGAGAT AATTTAATGG AAAGTATTAA AAAATTCTAC ATTAATGAAA AAGAATTTAA TTCATTAAAT AAAAAGGAAA AACCAAAATA TTTACAGAAA TTAAAAGGCA AAGTATTGAC AAAGGAAGAT GTTGAAGTTA GAGATATATT AAGAGCTCAT AGAGTATTCA TTGAATCTTC TGCTTTACAA TGGTTCATCA CTAAACATAC TGTTTAA
AA Sequence
MFKQSIRSLA TKSPISSAAA TTTTASTTST TTTASLNFAK PPSYTLAQLR EFPSLEPKTF IPLPTTFFNT EKPIRRDILW SCVTYEADKA RVGSNYAILK SDSPYSNRKL RPQKGSGRAR LGDANSPHMD NEIKAHAIKG PHDWSTDLPS KIYSRGIQNA FTMHYKQGNL NVVENELDFQ YGYDIITQLF VSVHNLNKLN LLFITNEPRD NLMESIKKFY INEKEFNSLN KKEKPKYLQK LKGKVLTKED VEVRDILRAH RVFIESSALQ WFITKHTV*