| Acc# | Gene | Locus | DB | Organism | Product | Score | E-value | Identities | Positives | Gaps |
|---|---|---|---|---|---|---|---|---|---|---|
| P35271 | (RPS18A | RS18_YEAST | SP | Saccharomyces cerevisiae (Baker's yeast) | 40S ribosomal protein S18. | 230 | 2e-60 | 110/129 (85%) | 119/129 (92%) | |
| Q8ISP0 | TrEMBL | Branchiostoma belcheri (Amphoxius) | Ribosomal protein S18. | 204 | 1e-52 | 93/127 (73%) | 115/127 (90%) | |||
| O94754 | (RPS18A | RS18_SCHPO | SP | Schizosaccharomyces pombe (Fission yeast) | 40S ribosomal protein S18. | 202 | 8e-52 | 91/127 (71%) | 117/127 (92%) | |
| P25232 | RPS18 | RS18_HUMAN | SP | Sus scrofa (Pig) | 40S ribosomal protein S18 (KE-3) (KE3). | 200 | 2e-51 | 93/127 (73%) | 113/127 (88%) | |
| Q8IT98 | TrEMBL | Aequipecten irradians (Bay scallop) | Ribosomal protein S18. | 199 | 5e-51 | 89/127 (70%) | 114/127 (89%) | |||
| Q90YQ5 | TrEMBL | Ictalurus punctatus (Channel catfish) | 40S ribosomal protein S18. | 199 | 5e-51 | 93/127 (73%) | 113/127 (88%) | |||
| Q9GPA9 | TrEMBL | Cherax destructor (Yabbie) | Ribosomal protein S18 (Fragment). | 199 | 4e-51 | 91/127 (71%) | 113/127 (88%) | |||
| Q8JGS9 | RPS18 | TrEMBL | Brachydanio rerio (Zebrafish) (Danio rerio) | 40S ribosomal protein S18. | 198 | 9e-51 | 93/127 (73%) | 112/127 (88%) | ||
| Q962R1 | TrEMBL | Spodoptera frugiperda (Fall armyworm) | Ribosomal protein S18. | 195 | 7e-50 | 89/127 (70%) | 112/127 (88%) | |||
| P41094 | RPS18 | RS18_DROME | SP | Drosophila melanogaster (Fruit fly) | 40S ribosomal protein S18. | 194 | 2e-49 | 87/127 (68%) | 112/127 (88%) | |
| Q8MT19 | BCDNA:RH43343 | TrEMBL | Drosophila melanogaster (Fruit fly) | RH43343p. | 194 | 2e-49 | 87/127 (68%) | 112/127 (88%) | ||
| Q8H590 | OJ1656_E11.4 | TrEMBL | Oryza sativa (japonica cultivar-group) | Putative ribosomal protein S18 (Putative ribosomal protein S18A). | 192 | 8e-49 | 85/127 (66%) | 110/127 (86%) | ||
| Q8H588 | OJ1656_E11.6 | TrEMBL | Oryza sativa (japonica cultivar-group) | Putative ribosomal protein S18. | 191 | 1e-48 | 84/127 (66%) | 110/127 (86%) | ||
| P34788 | (RPS18C | RS18_ARATH | SP | Arabidopsis thaliana (Mouse-ear cress) | 40S ribosomal protein S18. | 187 | 2e-47 | 85/127 (66%) | 108/127 (85%) | |
| Q8L806 | TrEMBL | Triticum aestivum (Wheat) | Putative ribosomal protein S18. | 185 | 1e-46 | 79/127 (62%) | 110/127 (86%) | |||
| O18240 | Y57G11C.16 | TrEMBL | Caenorhabditis elegans | Y57G11C.16 protein. | 185 | 8e-47 | 84/131 (64%) | 110/131 (83%) | ||
| Q9IAC0 | KE3 | TrEMBL | Brachydanio rerio (Zebrafish) (Danio rerio) | Ke3 (Fragment). | 184 | 2e-46 | 86/119 (72%) | 104/119 (87%) | ||
| Q869U7 | TrEMBL | Dictyostelium discoideum (Slime mold) | Similar to Branchiostoma belcheri (Amphoxius). ribosomal protein S18. | 182 | 6e-46 | 84/127 (66%) | 105/127 (82%) | |||
| Q861U5 | TrEMBL | Bos taurus (Bovine) | Similar to 40S ribosomal protein S18 (Fragment). | 181 | 1e-45 | 84/117 (71%) | 104/117 (88%) | |||
| Q862S8 | TrEMBL | Bos taurus (Bovine) | Similar to ribosomal protein S18 (Fragment). | 181 | 1e-45 | 84/117 (71%) | 104/117 (88%) | |||
| P49202 | RPS18 | RS18_CHLRE | SP | Chlamydomonas reinhardtii | 40S ribosomal protein S18. | 179 | 5e-45 | 82/127 (64%) | 105/127 (82%) | |
| Q8IIA2 | PF11_0272 | TrEMBL | Plasmodium falciparum (isolate 3D7) | Ribosomal protein S18, putative. | 179 | 4e-45 | 81/127 (63%) | 106/127 (83%) | ||
| P48151 | RPS18 | RS18_ENTHI | SP | Entamoeba histolytica | 40S ribosomal protein S18. | 173 | 4e-43 | 78/125 (62%) | 102/125 (81%) | |
| Q9XSU5 | RPS18 | TrEMBL | Canis familiaris (Dog) | Ribosomal protein (Fragment). | 142 | 6e-34 | 65/86 (75%) | 76/86 (88%) | ||
| Q9Z291 | TrEMBL | Cricetulus sp | Ribosomal protein S18 (Fragment). | 135 | 9e-32 | 61/84 (72%) | 73/84 (86%) | |||
| O74021 | RPS13P | RS13_PYRHO | SP | Pyrococcus horikoshii | 30S ribosomal protein S13P. | 115 | 7e-26 | 53/123 (43%) | 86/123 (69%) | |
| O26141 | RPS13P | RS13_METTH | SP | Methanobacterium thermoautotrophicum | 30S ribosomal protein S13P. | 113 | 4e-25 | 54/123 (43%) | 81/123 (65%) | |
| Q9V1A0 | RPS13P | RS13_PYRAB | SP | Pyrococcus abyssi | 30S ribosomal protein S13P. | 113 | 4e-25 | 52/123 (42%) | 85/123 (69%) | |
| Q8TVC1 | RPS13P | RS13_METKA | SP | Methanopyrus kandleri | 30S ribosomal protein S13P. | 113 | 4e-25 | 56/129 (43%) | 87/129 (67%) | 2/129 (1%) |
| Q8SRP2 | ECU06_1110 | TrEMBL | Encephalitozoon cuniculi | 40S ribosomal protein S18. | 112 | 6e-25 | 57/133 (42%) | 85/133 (63%) |
Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S13 Ribosomal protein S13/S18 259.5 4.7e-74 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S13 1/1 6 134 .. 1 131 [] 259.5 4.7e-74
CDS Sequence
ATGAATTATT ATTATAGTTT GTTAAACACC AACATTGATG GTAGAATCAA GATCATGTAC GCCTTGACCA AGATCAGAGG TGTCGGTAGA AGATATGCCA ACTTGGTTTG TAAAAAAGCC GATGTTGAAT TAACCAAAAG AGCTGGTGAA TTGACCCAAG AAGAATTGGA AAGAATTGTC ACCATTATGC AAAACCCAAC CAACTATAAA ATCCCAGCTT GGTTCTTGAA CAGACAAAAA GATCAAGTTG ATGGTAAAGA TTACCATGTT TTAGCTAACA ACTTGGAATC TAAATTGAGA GATGATTTGG AAAGATTGAA GAAAATCAGA TCTCACAGAG GTATTAGACA CTTCTGGGGA TTGAAAGTTA GAGGTCAACA TACTAAAACT ACTTCTCGTG GTCGTTAA
AA Sequence
MNYYYSLLNT NIDGRIKIMY ALTKIRGVGR RYANLVCKKA DVELTKRAGE LTQEELERIV TIMQNPTNYK IPAWFLNRQK DQVDGKDYHV LANNLESKLR DDLERLKKIR SHRGIRHFWG LKVRGQHTKT TSRGR*