| Acc# | Gene | Locus | DB | Organism | Product | Score | E-value | Identities | Positives | Gaps |
|---|---|---|---|---|---|---|---|---|---|---|
| P34161 | YOX1 | YOX1_YEAST | SP | Saccharomyces cerevisiae (Baker's yeast) | Homeobox protein YOX1. | 115 | 1e-24 | 59/108 (54%) | 76/108 (70%) | 2/108 (1%) |
| Q04116 | YHP1 | TrEMBL | Saccharomyces cerevisiae (Baker's yeast) | Homeodomain protein. | 105 | 6e-22 | 50/86 (58%) | 68/86 (79%) | ||
| O43988 | WARIAI | TrEMBL | Dictyostelium discoideum (Slime mold) | Homeobox-containing protein Wariai (Fragment). | 56.2 | 6e-07 | 26/63 (41%) | 41/63 (65%) | ||
| Q9V3K6 | ZEN2 | TrEMBL | Drosophila melanogaster (Fruit fly) | ZERKNUELLT protein 2 (ZEN-2). | 55.8 | 8e-07 | 32/93 (34%) | 55/93 (59%) | 8/93 (8%) | |
| O43248 | HOXC11 | HXCB_HUMAN | SP | Homo sapiens (Human) | Homeobox protein Hox-C11. | 55.5 | 1e-06 | 27/77 (35%) | 48/77 (62%) | |
| Q9HFI0 | H1 | TrEMBL | Podospora anserina | Homeoprotein. | 55.1 | 1e-06 | 29/75 (38%) | 46/75 (61%) | 4/75 (5%) | |
| Q90470 | HOXD11A | TrEMBL | Brachydanio rerio (Zebrafish) (Danio rerio) | HoxD11. | 55.1 | 1e-06 | 27/81 (33%) | 52/81 (64%) | ||
| P09082 | GSB | GSB_DROME | SP | Drosophila melanogaster (Fruit fly) | Gooseberry protein (Gooseberry distal protein) (BSH9). | 54.7 | 2e-06 | 27/84 (32%) | 47/84 (55%) | |
| O13202 | TrEMBL | Danio cf. aequipinnatus | Hoxd10 (Fragment). | 53.9 | 3e-06 | 27/79 (34%) | 47/79 (59%) | |||
| Q801F1 | TrEMBL | Xenopus laevis (African clawed frog) | Hoxc10. | 52.8 | 6e-06 | 28/78 (35%) | 47/78 (60%) | |||
| P40923 | SPBC21B10.13C | YHZ3_SCHPO | SP | Schizosaccharomyces pombe (Fission yeast) | Hypothetical protein C21B10.13c in chromosome II. | 52.8 | 6e-06 | 26/59 (44%) | 40/59 (67%) | 2/59 (3%) |
| Q9DF45 | HOXC10 | TrEMBL | Ambystoma mexicanum (Axolotl) | Homeodomain protein Hoxc10 short form. | 52.8 | 6e-06 | 28/78 (35%) | 47/78 (60%) | ||
| Q801B1 | TrEMBL | Latimeria menadoensis (Indonesian coelacanth) | HoxC10 (Fragment). | 52.8 | 6e-06 | 28/78 (35%) | 47/78 (60%) | |||
| Q9DF46 | HOXC10 | TrEMBL | Ambystoma mexicanum (Axolotl) | Homeodomain protein Hoxc10 long form. | 52.8 | 6e-06 | 28/78 (35%) | 47/78 (60%) | ||
| Q99160 | HOY1 | HOY1_YARLI | SP | Yarrowia lipolytica (Candida lipolytica) | Homeobox protein HOY1. | 52.8 | 6e-06 | 23/57 (40%) | 38/57 (66%) | |
| Q9PWD6 | HOXA10 | HXAA_MORSA | SP | Morone saxatilis (Striped bass) | Homeobox protein Hox-A10. | 52.4 | 8e-06 | 27/78 (34%) | 45/78 (57%) | |
| Q9NYD6 | HOXC10 | HXCA_HUMAN | SP | Homo sapiens (Human) | Homeobox protein Hox-C10. | 52.4 | 8e-06 | 28/78 (35%) | 47/78 (60%) | |
| P31257 | HOXC10 | HXCA_MOUSE | SP | Mus musculus (Mouse) | Homeobox protein Hox-C10 (Hox-3.6). | 52.4 | 8e-06 | 28/78 (35%) | 47/78 (60%) | |
| Q8BZY5 | TrEMBL | Mus musculus (Mouse) | Homeobox protein hox-C10. | 52.4 | 8e-06 | 28/78 (35%) | 47/78 (60%) | |||
| Q90469 | HOXD10 | HXDA_BRARE | SP | Brachydanio rerio (Zebrafish) (Danio rerio) | Homeobox protein Hox-D10. | 52.4 | 8e-06 | 27/78 (34%) | 45/78 (57%) | |
| P09090 | ZEN2 | HMZ2_DROME | SP | Drosophila melanogaster (Fruit fly) | Zerknuellt protein 2 (ZEN-2). | 52.0 | 1e-05 | 31/93 (33%) | 54/93 (58%) | 8/93 (8%) |
| Q9NFW4 | CNOX-3 | TrEMBL | Hydra attenuata (Hydra) (Hydra vulgaris) | Homeoprotein (Fragment). | 52.0 | 1e-05 | 25/74 (33%) | 45/74 (60%) | ||
| Q8MWG2 | OTP | TrEMBL | Patella vulgata (Common limpet) | Orthopedia (Fragment). | 52.0 | 1e-05 | 28/87 (32%) | 48/87 (55%) | 3/87 (3%) | |
| Q8BJI4 | D130006K24RIK | TrEMBL | Mus musculus (Mouse) | Retina-derived POU-domain factor-1 homolog. | 52.0 | 1e-05 | 30/83 (36%) | 46/83 (55%) | 1/83 (1%) | |
| Q95US3 | PBY1 | TrEMBL | Schistocerca americana (American grasshopper) | Pairberry 1 transcription factor (Fragment). | 52.0 | 1e-05 | 31/88 (35%) | 42/88 (47%) | 2/88 (2%) | |
| Q9PVQ7 | HXOA9A | TrEMBL | Oryzias latipes (Medaka fish) (Japanese ricefish) | HOXA9A. | 51.6 | 1e-05 | 27/91 (29%) | 51/91 (56%) | 9/91 (9%) | |
| P78424 | RPF1 | RPF1_HUMAN | SP | Homo sapiens (Human) | Retina-derived POU-domain factor-1 (RPF-1). | 51.6 | 1e-05 | 28/80 (35%) | 46/80 (57%) | 4/80 (5%) |
| Q06858 | TrEMBL | Saccharomyces cerevisiae (Baker's yeast) | PHO2 protein. | 51.2 | 2e-05 | 26/73 (35%) | 43/73 (58%) | |||
| Q90267 | OTX3 | OTX3_BRARE | SP | Brachydanio rerio (Zebrafish) (Danio rerio) | Homeobox protein OTX3 (ZOTX3). | 51.2 | 2e-05 | 39/160 (24%) | 62/160 (38%) | 18/160 (11%) |
| Q9W7M5 | OTP | TrEMBL | Brachydanio rerio (Zebrafish) (Danio rerio) | Orthopedia protein. | 51.2 | 2e-05 | 29/85 (34%) | 45/85 (52%) | 3/85 (3%) |
Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- homeobox Homeobox domain 68.0 2.1e-16 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- homeobox 1/1 174 230 .. 1 57 [] 68.0 2.1e-16
CDS Sequence
atgatgatgc acttacaaca aacaccaact aaaagatcaa tcttaccacc aatcactcca ttaactaatt ccaacaatgg ttcaaaacta agtttaccac ctttatcttc tattttacca actgctccaa gtagtcatta tagagatcat ccattgacta ctagtacccc atacaaggca ccattgccat caataaatac ttcagctgct tatcaaagtc catcaatgac ttatggtagt tatattccaa ctccagaatc agccacttca ctggtaacta gttccaataa gagaagcttt tctgtgctcg atgattcatc aataatggat actagtatac tagaagaaag aaaattaaag gcatccacca gttcatcagt tgcttccaca tcttcttcat ctccaacact ttcttcacct gcctctactc ctactgacaa caaggcttat gcatttattt cacattcact agctactttc ccactgcaag aaccatcaat tgataatgct ccattagcaa gacgtaaaag aagaagaact tcacctcatg aattaaatat attgaatcaa gaatttgctt taggaacaac ccctaataaa tcaagaagaa ttcaaattgc taaaaaagtt tccatgacgg aaaaggctgt acaaatatgg tttcaaaata aaagacaatc aataagaaaa caactgaatc tggaaaaaga aatcactgta ttaccaccaa cttcaaatta tcccccattt caacaacacc aaccagaaca aatatcaact ttacctccac ctccaccagc acaagtgcaa cctgtacaac ctgtacaatc tgtgcaacta ccaattcaag ctcaatcaac accattacca aaacctgcta gcatttcccc actcccgatt acaaattcct atacttctat gaaattcaaa tttatgccaa gtaagagtaa agtcactcgt aaactacaag aatgtaaagc tttaggtgat atcaccaatt tacaataa
AA Sequence
MMMHLQQTPT KRSILPPITP LTNSNNGSKL SLPPLSSILP TAPSSHYRDH PLTTSTPYKA PLPSINTSAA YQSPSMTYGS YIPTPESATS LVTSSNKRSF SVLDDSSIMD TSILEERKLK ASTSSSVAST SSSSPTLSSP ASTPTDNKAY AFISHSLATF PLQEPSIDNA PLARRKRRRT SPHELNILNQ EFALGTTPNK SRRIQIAKKV SMTEKAVQIW FQNKRQSIRK QLNLEKEITV LPPTSNYPPF QQHQPEQIST LPPPPPAQVQ PVQPVQSVQL PIQAQSTPLP KPASISPLPI TNSYTSMKFK FMPSKSKVTR KLQECKALGD ITNLQ*