| Acc# | Gene | Locus | DB | Organism | Product | Score | E-value | Identities | Positives | Gaps |
|---|---|---|---|---|---|---|---|---|---|---|
| P05317 | RPP0 | RLA0_YEAST | SP | Saccharomyces cerevisiae (Baker's yeast) | 60S acidic ribosomal protein P0 (L10E). | 410 | e-114 | 206/312 (66%) | 240/312 (76%) | |
| Q96TJ5 | CRPP0 | RLA0_NEUCR | SP | Neurospora crassa | 60S acidic ribosomal protein P0. | 365 | e-100 | 181/313 (57%) | 225/313 (71%) | 1/313 (0%) |
| Q9C3Z6 | TrEMBL | Podospora anserina | Ribosomal protein P0. | 362 | 4e-99 | 177/267 (66%) | 214/267 (80%) | |||
| O74864 | SPCC18.14C | TrEMBL | Schizosaccharomyces pombe (Fission yeast) | Putative 60s acidic ribosomal protein p0. | 356 | 2e-97 | 171/312 (54%) | 220/312 (70%) | ||
| P05388 | RPLP0 | RLA0_HUMAN | SP | Homo sapiens (Human) | 60S acidic ribosomal protein P0 (L10E). | 298 | 5e-80 | 155/308 (50%) | 199/308 (64%) | 3/308 (0%) |
| Q9DG68 | RPLP0 | RLA0_RANSY | SP | Rana sylvatica (Wood frog) | 60S acidic ribosomal protein P0 (L10E). | 297 | 1e-79 | 153/306 (50%) | 198/306 (64%) | 1/306 (0%) |
| P14869 | RPLP0 | RLA0_MOUSE | SP | Mus musculus (Mouse) | 60S acidic ribosomal protein P0 (L10E). | 297 | 1e-79 | 154/308 (50%) | 198/308 (64%) | 3/308 (0%) |
| P19945 | RPLP0 | RLA0_RAT | SP | Rattus norvegicus (Rat) | 60S acidic ribosomal protein P0 (L10E). | 297 | 1e-79 | 154/308 (50%) | 198/308 (64%) | 3/308 (0%) |
| P47826 | RPLP0 | RLA0_CHICK | SP | Gallus gallus (Chicken) | 60S acidic ribosomal protein P0 (L10E). | 296 | 3e-79 | 153/307 (49%) | 198/307 (64%) | 2/307 (0%) |
| Q95140 | RPLP0 | RLA0_BOVIN | SP | Bos taurus (Bovine) | 60S acidic ribosomal protein P0 (L10E) (Fragment). | 296 | 2e-79 | 154/309 (49%) | 198/309 (64%) | 4/309 (1%) |
| Q7ZUG3 | TrEMBL | Brachydanio rerio (Zebrafish) (Danio rerio) | Hypothetical protein. | 296 | 2e-79 | 154/307 (50%) | 197/307 (64%) | 2/307 (0%) | ||
| Q8AVI3 | TrEMBL | Xenopus laevis (African clawed frog) | Similar to acidic ribosomal protein P0. | 294 | 1e-78 | 151/306 (49%) | 197/306 (64%) | 1/306 (0%) | ||
| Q8NHW5 | TrEMBL | Homo sapiens (Human) | BLOCK 23. | 292 | 4e-78 | 153/308 (49%) | 196/308 (63%) | 3/308 (0%) | ||
| Q9PV90 | RPLP0 | RLA0_BRARE | SP | Brachydanio rerio (Zebrafish) (Danio rerio) | 60S acidic ribosomal protein P0 (L10E). | 290 | 2e-77 | 153/310 (49%) | 197/310 (63%) | 5/310 (1%) |
| Q90YX1 | RPLP0 | RLA0_ICTPU | SP | Ictalurus punctatus (Channel catfish) | 60S acidic ribosomal protein P0 (L10E). | 284 | 1e-75 | 141/257 (54%) | 182/257 (70%) | |
| Q8WQJ2 | TrEMBL | Spodoptera frugiperda (Fall armyworm) | 60S acidic ribosomal protein P0. | 284 | 9e-76 | 144/306 (47%) | 196/306 (64%) | 1/306 (0%) | ||
| Q8MQT0 | TrEMBL | Aedes albopictus (Forest day mosquito) | Ribosomal protein P0. | 283 | 3e-75 | 145/306 (47%) | 193/306 (63%) | 1/306 (0%) | ||
| P19889 | RPP0 | RLA0_DROME | SP | Drosophila melanogaster (Fruit fly) | 60S acidic ribosomal protein P0 (DNA-(apurinic or apyrimidinic site) lyase) (EC 4.2.99.18) (Apurinic-apyrimidinic endonuclease). | 280 | 2e-74 | 145/308 (47%) | 192/308 (62%) | 3/308 (0%) |
| Q9U3U0 | RPP0 | RLA0_CERCA | SP | Ceratitis capitata (Mediterranean fruit fly) | 60S acidic ribosomal protein P0 (CcP0). | 280 | 2e-74 | 143/308 (46%) | 192/308 (62%) | 3/308 (0%) |
| Q9NHP0 | TrEMBL | Sarcophaga crassipalpis | 60S acidic ribosomal protein P0. | 277 | 1e-73 | 143/307 (46%) | 190/307 (61%) | 2/307 (0%) | ||
| Q93572 | RPA-0 | RLA0_CAEEL | SP | Caenorhabditis elegans | 60S acidic ribosomal protein P0. | 276 | 3e-73 | 143/305 (46%) | 189/305 (61%) | |
| P50346 | RLA0_SOYBN | SP | Glycine max (Soybean) | 60S acidic ribosomal protein P0. | 259 | 4e-68 | 135/312 (43%) | 185/312 (59%) | 5/312 (1%) | |
| Q96FQ9 | TrEMBL | Homo sapiens (Human) | Similar to ribosomal protein, large, P0. | 256 | 2e-67 | 132/257 (51%) | 175/257 (68%) | |||
| Q42112 | AT3G09200 | RL0B_ARATH | SP | Arabidopsis thaliana (Mouse-ear cress) | 60S acidic ribosomal protein P0-B. | 254 | 1e-66 | 134/311 (43%) | 182/311 (58%) | 4/311 (1%) |
| P41095 | RLA0_ORYSA | SP | Oryza sativa (Rice) | 60S acidic ribosomal protein P0. | 254 | 1e-66 | 129/311 (41%) | 184/311 (59%) | 4/311 (1%) | |
| P57691 | AT3G11250 | RL0C_ARATH | SP | Arabidopsis thaliana (Mouse-ear cress) | 60S acidic ribosomal protein P0-C. | 253 | 2e-66 | 136/314 (43%) | 182/314 (57%) | 7/314 (2%) |
| O24573 | RP-P0 | RLA0_MAIZE | SP | Zea mays (Maize) | 60S acidic ribosomal protein P0. | 253 | 2e-66 | 128/310 (41%) | 187/310 (60%) | 3/310 (0%) |
| O04204 | AT2G40010 | RL0A_ARATH | SP | Arabidopsis thaliana (Mouse-ear cress) | 60S acidic ribosomal protein P0-A. | 252 | 5e-66 | 132/308 (42%) | 183/308 (59%) | 2/308 (0%) |
| Q9M5M5 | TrEMBL | Euphorbia esula (Leafy spurge) | 60S acidic ribosomal protein PO (Fragment). | 252 | 5e-66 | 132/312 (42%) | 187/312 (59%) | 5/312 (1%) | ||
| Q86EN9 | TrEMBL | Schistosoma japonicum (Blood fluke) | Clone ZZD1580 mRNA sequence. | 252 | 4e-66 | 124/260 (47%) | 178/260 (68%) |
Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L10 Ribosomal protein L10 172.1 9.5e-48 1 60s_ribosomal 60s Acidic ribosomal protein 80.1 4.5e-20 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L10 1/1 3 105 .. 1 106 [] 172.1 9.5e-48 60s_ribosomal 1/1 222 311 .. 1 94 [] 80.1 4.5e-20
CDS Sequence
ATGGGTGGTG CTAGAGAAAA GAAAGTTCAA TACTTCTCCA AATTAAGAGA ATTGTTAGAA GAATACAAAT CTATCTTCGT CGTTGGTGTC GATAATGTTT CTTCCCAACA AATGCACGAA ATCAGAAAGG CCTTGAGAGG TGATGCCGTC GTCTTGATGG GTAAAAACAC CATGGTCAGA AGAGCCATCA GAGGTTTCTT GTCTGAATTG CCAGAATTTG AAAAATTGTT GCCATTCATC AAAGGTAACG TTGGTTTCAT TTTCACCAAC GGTGATTTAA AATCCATTAG AGACATTGTT GTTTCTAATG TTGTTGCTGC ACCAGCCAGA GCTGGTGCCG TTGCTCCAAA AGATGTTTGG ATTCCAGCCG GTAACACTGG TATGGAACCA GGTAAGACCT CTTTCTTCCA AGCTTTGGGT GTTCCAACCA AGATTGCCAG AGGTACCATT GAAATTGTTT CCGATGTTAA GGTTGTTGAA CAAGATGCTA AAGTTGGTCC TTCCGAAGCT ACCTTGTTGA ACATGTTGAA CATCTCTCCA TTCACTTATG GTATGTCTGT TGTTCAAGTT TACGACAATG GTCAAGTCTT CCCATCATCC ATCTTGGATA TCACCGATGA CGAATTGATC AGCCATTTCG TTTCTGCTAT CAACACCATT GCTTCTATCT CTTTGGCTGC TGGTTACCCA ACCTTGCCAT CTGTTGGTCA CTCCATCATT AACAACTACA AGAACGTCTT GGCTTTGTCT GTTGCCACTG ACTACACTTA CGAAGGTTCT GAAGCTGTTA AAGACAGATT AGCTAACCCA GAAGCTTACG CTGCTGCTGC TCCAGCTGCT GCCGCTGCTG GTGGTGCTGC TGAAGAAGCT GCCACTGAAG AAGCTGCTGC CGATGAAGAA GAATCTGATG ACGACATGGG TTTCGGTTTA TTCGATTAA
AA Sequence
MGGAREKKVQ YFSKLRELLE EYKSIFVVGV DNVSSQQMHE IRKALRGDAV VLMGKNTMVR RAIRGFLSEL PEFEKLLPFI KGNVGFIFTN GDLKSIRDIV VSNVVAAPAR AGAVAPKDVW IPAGNTGMEP GKTSFFQALG VPTKIARGTI EIVSDVKVVE QDAKVGPSEA TLLNMLNISP FTYGMSVVQV YDNGQVFPSS ILDITDDELI SHFVSAINTI ASISLAAGYP TLPSVGHSII NNYKNVLALS VATDYTYEGS EAVKDRLANP EAYAAAAPAA AAAGGAAEEA ATEEAAADEE ESDDDMGFGL FD*