BLASTX 2.2.10 [Oct-19-2004]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
RID: 1114609752-6803-82878661784.BLASTQ2
Query= 
         (2238 letters)

Database: Non-redundant SwissProt sequences 
           169,283 sequences; 62,311,297 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|1709190|sp|P40959|MVP1_YEAST Sorting nexin MVP1                    274   6e-73
gi|10720288|sp|Q9Y5X2|SNX8_HUMAN Sorting nexin 8                       92   4e-18
gi|17368826|sp|Q9CY18|SNX7_MOUSE Sorting nexin 7                       69   5e-11
gi|12643904|sp|Q9UNH6|SNX7_HUMAN Sorting nexin 7                       68   9e-11
gi|20140146|sp|Q96RF0|SNX18_HUMAN Sorting nexin 18 (Sorting nexi...    65   8e-10
gi|23822179|sp|Q91ZR2|SNX18_MOUSE Sorting nexin 18 (Sorting nexi...    65   8e-10
gi|10720282|sp|O95219|SNX4_HUMAN Sorting nexin 4                       61   1e-08
gi|17367373|sp|Q99N27|SNX1_RAT Sorting nexin 1                         60   3e-08
gi|13124572|sp|Q9WV80|SNX1_MOUSE Sorting nexin 1                       60   3e-08
gi|1352971|sp|P47057|SNX4_YEAST Sorting nexin 4 (Autophagy-relat...    59   7e-08
gi|17380569|sp|Q13596|SNX1_HUMAN Sorting nexin 1                       56   4e-07
gi|20140232|sp|Q9CWK8|SNX2_MOUSE Sorting nexin 2                       56   5e-07
gi|59800468|sp|O14243|YELC_SCHPO Hypothetical protein C6F6.12 in...    55   6e-07
gi|12643623|sp|O60749|SNX2_HUMAN Sorting nexin 2                       54   1e-06
gi|14916716|sp|Q9Y5W9|SNX11_HUMAN Sorting nexin 11                     51   1e-05
gi|12643956|sp|Q9Y5X1|SNX9_HUMAN Sorting nexin 9 (SH3 and PX dom...    50   3e-05
gi|23822178|sp|Q91VH2|SNX9_MOUSE Sorting nexin 9                       49   4e-05
gi|12643620|sp|O60493|SNX3_HUMAN Sorting nexin 3 (SDP3 protein)        48   1e-04
gi|51702138|sp|Q9C0U7|VPS5_SCHPO Vacuolar protein sorting-associ...    48   1e-04
gi|10720280|sp|O70492|SNX3_MOUSE Sorting nexin 3 (SDP3 protein)        48   1e-04
gi|10720281|sp|O70493|SNX12_MOUSE Sorting nexin 12 (SDP8 protein)      46   4e-04
gi|2499128|sp|Q92331|VPS5_YEAST Vacuolar protein sorting-associa...    46   4e-04
gi|50403807|sp|Q9UMY4|SNX12_HUMAN Sorting nexin 12                     46   5e-04
gi|10720287|sp|Q9Y5X0|SNX10_HUMAN Sorting nexin 10                     44   0.002
gi|13124557|sp|P57768|SNX16_HUMAN Sorting nexin 16                     42   0.005
gi|61216767|sp|Q04053|SNX41_YEAST Sorting nexin 41                     42   0.005
gi|13124541|sp|P57769|SNX16_RAT Sorting nexin 16                       42   0.009
gi|3123050|sp|Q15036|SNX17_HUMAN Sorting nexin 17                      39   0.076
gi|418174|sp|P32912|VAM7_YEAST Vacuolar morphogenesis protein VAM7     37   0.17 
gi|10720283|sp|Q08826|SNX3_YEAST Sorting nexin GRD19                   37   0.22 
gi|61211719|sp|Q07528|ATG20_YEAST Sorting nexin 42 (Autophagy-re...    36   0.38 
gi|20140249|sp|Q9H3E2|SNX25_HUMAN Sorting nexin 25 (MSTP043)           35   0.64 
gi|20141813|sp|Q9Y5W7|SNX14_HUMAN Sorting nexin 14                     35   1.1  
gi|56748693|sp|Q6KHL2|CBO1_MYCMO Cobalt import ATP-binding prote...    35   1.1  
gi|731694|sp|P38815|YHQ5_YEAST Hypothetical 24.6 kDa protein in ...    34   1.4  
gi|3123114|sp|Q58510|YB10_METJA Hypothetical protein MJ1110            34   1.4  
gi|14195303|sp|Q9WYA4|TRME_THEMA Probable tRNA modification GTPa...    33   2.4  
gi|20140234|sp|Q9D2Y5|SNX20_MOUSE Sorting nexin 20                     33   3.2  
gi|3913273|sp|Q66154|COAT_CMVAS Coat protein (Capsid protein) (CP)     33   3.2  
gi|20137893|sp|Q971T3|DHYS_SULTO Probable deoxyhypusine synthase...    33   3.2  
gi|417366|sp|P20103|NISB_LACLA Nisin biosynthesis protein nisB         33   4.2  
gi|21362931|sp|Q97FK1|SBCC_CLOAB Nuclease sbcCD subunit C              33   4.2  
gi|113594|sp|P16116|ALDR_BOVIN Aldose reductase (AR) (Aldehyde r...    32   5.4  
gi|730792|sp|P40612|SPAM_SALTY Surface presentation of antigens ...    32   7.1  
gi|22096034|sp|Q8R5W0|RF1_FUSNN Peptide chain release factor 1 (...    32   7.1  
gi|32171840|sp|Q8EVM0|Y544_MYCPE Hypothetical UPF0144 protein MY...    32   9.3  
gi|2506556|sp|P54988|NTRA_CHEHE Nta operon transcriptional regul...    32   9.3  

ALIGNMENTS
>gi|1709190|sp|P40959|MVP1_YEAST Sorting nexin MVP1
          Length = 511

 Score =  274 bits (701), Expect = 6e-73
 Identities = 168/506 (33%), Positives = 275/506 (54%), Gaps = 13/506 (2%)
 Frame = +1

Query: 757  NFGDPL---------LVDHSYIHDDLIDESRS-VGGTQPQQXXXXXXXXXXXXXXXTIAP 906
            NF  PL         L  +  + + + D+SR+ +G T   Q                   
Sbjct: 45   NFSTPLDTNEEDTGFLPTNDVLEESIWDDSRNPLGATGMSQTPNIAANETVIDKNDARDQ 104

Query: 907  NVDSSYIE--KYINDIKDQFKPLFSGIDLIKIKEVPEKEGIIFKHINYMITHDLKIGGTS 1080
            N++ S  +   + N+++  ++PL +  D+I I+E+PE+EG++FKH NY++ H + +  TS
Sbjct: 105  NIEESEADLLDWTNNVRKTYRPLDA--DIIIIEEIPEREGLLFKHANYLVKHLIALPSTS 162

Query: 1081 -SGTKKVIRRYSDFVWLMEYLLEKYPFRVIPGLPPKKFTVGASPDSQFLQRRRRGLHRFL 1257
             S  + V+RRYSDF+WL E LL++YPFR+IP LPPK+     + D  FL++RR GL RF+
Sbjct: 163  PSEERTVVRRYSDFLWLREILLKRYPFRMIPELPPKRIG-SQNADQLFLKKRRIGLSRFI 221

Query: 1258 NQLIKHPILSQEPIVQSFLTVPTDLTTWKKQAKIDSSLEFKGQKIQTDFINVIWPIMGEP 1437
            N ++KHP LS + +V +FLTV TDLT+W+KQA  D+S EF  +KI  +F+  +W    + 
Sbjct: 222  NLVMKHPKLSNDDLVLTFLTVRTDLTSWRKQATYDTSNEFADKKISQEFMK-MWK---KE 277

Query: 1438 FLKKWRQAEENIQFIIDKWVKIIILVERYERRQQQISFDNGKFAEMLNGFSKLNTKIYPX 1617
            F ++W QA   I   ++ W +I +L+ER+E+R  Q+  +   F  +++ FS++  K+YP 
Sbjct: 278  FAEQWNQAASCIDTSMELWYRITLLLERHEKRIMQMVHERNFFETLVDNFSEVTPKLYP- 336

Query: 1618 XXXXXXXXXXXXXXXXXXXXXXXXYKQDFDFNSSGDIININQCLNSIGEFFNKSSQVLID 1797
                                             +  I++IN  L+ I +    +S +   
Sbjct: 337  ------------------------------VQQNDTILDINNNLSIIKKHLETTSSICKQ 366

Query: 1798 ESYIINTKTLEKFKNYLDYLNSLQELFERTKQLSINQIDLLDKRIKDQEIKFKKISEENP 1977
            E+  I+     KFK + D L SL+ LFER K ++ N +  L + ++  + K + + +  P
Sbjct: 367  ETEEISGTLSPKFKIFTDILLSLRSLFERYKIMAANNVVELQRHVELNKEKLESM-KGKP 425

Query: 1978 DIKGGELIKLRQSIINDKQEIFQQLNKDWLIKQCCLQEFIIFQETQFLITELWVEWCKDR 2157
            D+ G E  ++++ I  D++ I +Q N+ WLI+QC L+EF IFQETQFLIT  + +W K  
Sbjct: 426  DVSGAEYDRIKKIIQKDRRSIIEQSNRAWLIRQCILEEFTIFQETQFLITRAFQDWAKLN 485

Query: 2158 LKCQEKLVGLYDNLNQEIIHDMPLER 2235
                   +  ++ L   I+ DMP+ R
Sbjct: 486  SNHAGLKLNEWEKLVTSIM-DMPISR 510


>gi|10720288|sp|Q9Y5X2|SNX8_HUMAN Sorting nexin 8
          Length = 465

 Score = 92.4 bits (228), Expect = 4e-18
 Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 5/189 (2%)
 Frame = +1

Query: 982  DLIKIKEVPEKEGIIFKHINYMITHDLKIGGTSSGTKKVIRRYSDFVWLMEYLLEKYPFR 1161
            D ++++ +PEK+G+  KH+ Y ++       +      V RRY+DFV   E LL K+P+R
Sbjct: 75   DTVQVELIPEKKGLFLKHVEYEVS-------SQRFKSSVYRRYNDFVVFQEMLLHKFPYR 127

Query: 1162 VIPGLPPKKFTVGASPDSQFLQRRRRGLHRFLNQLIKHPILSQEPIVQSFLTVPTDLTTW 1341
            ++P LPPK+  +GA  D +F++ RRR L RF+N + +HP+ S++ +++ FL+        
Sbjct: 128  MVPALPPKRM-LGA--DREFIEARRRALKRFVNLVARHPLFSEDVVLKLFLSF------- 177

Query: 1342 KKQAKIDSSLEFKGQKIQTDFINVIWPIMGEPFLKKWRQAE-----ENIQFIIDKWVKII 1506
               + + + L+   Q +  +F+N       + FL    QA+     E I+ I + + K+ 
Sbjct: 178  -SGSDVQNKLKESAQCVGDEFLNCKLATRAKDFLPADIQAQFAISRELIRNIYNSFHKLR 236

Query: 1507 ILVERYERR 1533
               ER   R
Sbjct: 237  DRAERIASR 245


>gi|17368826|sp|Q9CY18|SNX7_MOUSE Sorting nexin 7
          Length = 387

 Score = 68.9 bits (167), Expect = 5e-11
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
 Frame = +1

Query: 937  INDIKDQFKPLFSGIDLIKIKEVPEKE-GIIFKHINYMITHDLKIGGTSSGTKKVIRRYS 1113
            IN IK +  P     DL    + PE     I   I Y I      G   S   +V RRY 
Sbjct: 18   INQIKFEDGPDLK--DLFITVDAPESHVTTIETFITYRIVTKTSRGEFDSSEFEVRRRYQ 75

Query: 1114 DFVWLMEYLLEKYPFRVIPGLPPKKFTVGASP--DSQFLQRRRRGLHRFLNQLIKHPILS 1287
            DF+WL   L E +P  +IP LP K    G     +  F++ RR+ LH+FLN++  HP L+
Sbjct: 76   DFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLT 135

Query: 1288 QEPIVQSFLTVPT-DLTTWKKQ 1350
                 + FLT    +L+++KKQ
Sbjct: 136  FNEDFKVFLTAQAEELSSYKKQ 157


>gi|12643904|sp|Q9UNH6|SNX7_HUMAN Sorting nexin 7
          Length = 387

 Score = 68.2 bits (165), Expect = 9e-11
 Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
 Frame = +1

Query: 937  INDIKDQFKPLFSGIDLIKIKEVPEKEGIIFKHINYMITHDLKIGGTSSGTKKVIRRYSD 1116
            IN IK + +P    +  I + E       I   I Y I      G   S   +V RRY D
Sbjct: 18   INQIKFEDEPDLKDL-FITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQD 76

Query: 1117 FVWLMEYLLEKYPFRVIPGLPPKKFTVGASP--DSQFLQRRRRGLHRFLNQLIKHPILSQ 1290
            F+WL   L E +P  +IP LP K    G     +  F++ RR+ LH+FLN++  HP L+ 
Sbjct: 77   FLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTF 136

Query: 1291 EPIVQSFLTVPT-DLTTWKKQ 1350
                + FLT    +L++ KKQ
Sbjct: 137  NEDFKIFLTAQAWELSSHKKQ 157


>gi|20140146|sp|Q96RF0|SNX18_HUMAN Sorting nexin 18 (Sorting nexin associated Golgi protein 1)
          Length = 628

 Score = 65.1 bits (157), Expect = 8e-10
 Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1096 VIRRYSDFVWLMEYLLEKYPFRVIPGLPPKKFTVGASPDSQFLQRRRRGLHRFLNQLIKH 1275
            V RRY  F WL   L EK+P   +P LP K+ T     D  F+ +RR+GL  ++N +  H
Sbjct: 309  VHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEED--FISKRRKGLIWWMNHMASH 366

Query: 1276 PILSQEPIVQSFLTVP--TDLTTWKK 1347
            P+L+Q  + Q FLT P  TD   WK+
Sbjct: 367  PVLAQCDVFQHFLTCPSSTDEKAWKQ 392


>gi|23822179|sp|Q91ZR2|SNX18_MOUSE Sorting nexin 18 (Sorting nexin associated Golgi protein 1)
          Length = 614

 Score = 65.1 bits (157), Expect = 8e-10
 Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1096 VIRRYSDFVWLMEYLLEKYPFRVIPGLPPKKFTVGASPDSQFLQRRRRGLHRFLNQLIKH 1275
            V RRY  F WL   L EK+P   +P LP K+ T     D  F+ +RR+GL  ++N +  H
Sbjct: 299  VHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEED--FISKRRKGLIWWMNHMASH 356

Query: 1276 PILSQEPIVQSFLTVP--TDLTTWKK 1347
            P+L+Q  + Q FLT P  TD   WK+
Sbjct: 357  PVLAQCDVFQHFLTCPSSTDEKAWKQ 382


>gi|10720282|sp|O95219|SNX4_HUMAN Sorting nexin 4
          Length = 450

 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
 Frame = +1

Query: 1072 GTSSGTKKVIRRYSDFVWLMEYLLEKYPFRVIPGLPPKKFTV------GASPDSQFLQRR 1233
            G S  T  + RRYS+F  L  YLL  YP  V+P LP K+           + D  F++RR
Sbjct: 95   GQSVLTDSLWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERR 154

Query: 1234 RRGLHRFLNQLIKHPILSQEPIVQSFLTVPTDLTTWKK-------QAKIDSSLE 1374
            R GL  FL ++  HPIL ++ I   FLT   +   WK+       Q K DS L+
Sbjct: 155  RIGLENFLLRIASHPILCRDKIFYLFLTQEGN---WKETVNETGFQLKADSRLK 205


>gi|17367373|sp|Q99N27|SNX1_RAT Sorting nexin 1
          Length = 522

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
 Frame = +1

Query: 895  TIAPNVDSSYIEKYINDIKDQFKPLFSGIDLIKIKEVPEKEGI-IFKHINYMITHDLKIG 1071
            T +P    SY E    + +DQF       DL      PEK G  +  ++ Y +T    + 
Sbjct: 122  TNSPKPQPSYEELEEEEQEDQF-------DLTVGITDPEKIGDGMNAYVAYKVTTQTSLP 174

Query: 1072 GTSSGTKKVIRRYSDFVWLMEYLLEKYP---FRVIPGLPPKKFTVGA---------SPDS 1215
               S    V RR+SDF+ L E L EK+    F V P  PP+K  +G          S  +
Sbjct: 175  MFRSRQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPP--PPEKSLIGMTKVKVGKEDSSSA 232

Query: 1216 QFLQRRRRGLHRFLNQLIKHPILSQEPIVQSFL 1314
            +FL++RR  L R+L +++ HP + Q+P V+ FL
Sbjct: 233  EFLEKRRAALERYLQRIVNHPTMLQDPDVREFL 265


>gi|13124572|sp|Q9WV80|SNX1_MOUSE Sorting nexin 1
          Length = 522

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
 Frame = +1

Query: 895  TIAPNVDSSYIEKYINDIKDQFKPLFSGIDLIKIKEVPEKEGI-IFKHINYMITHDLKIG 1071
            T +P    SY E    + +DQF       DL      PEK G  +  ++ Y +T    + 
Sbjct: 122  TNSPKPQPSYEELEEEEQEDQF-------DLTVGITDPEKIGDGMNAYVAYKVTTQTSLP 174

Query: 1072 GTSSGTKKVIRRYSDFVWLMEYLLEKYP---FRVIPGLPPKKFTVGA---------SPDS 1215
               S    V RR+SDF+ L E L EK+    F V P  PP+K  +G          S  +
Sbjct: 175  MFRSRQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPP--PPEKSLIGMTKVKVGKEDSSSA 232

Query: 1216 QFLQRRRRGLHRFLNQLIKHPILSQEPIVQSFL 1314
            +FL++RR  L R+L +++ HP + Q+P V+ FL
Sbjct: 233  EFLEKRRAALERYLQRIVNHPTMLQDPDVREFL 265


>gi|1352971|sp|P47057|SNX4_YEAST Sorting nexin 4 (Autophagy-related protein 24) (Cytoplasm to vacuole
            targeting protein 13)
          Length = 423

 Score = 58.5 bits (140), Expect = 7e-08
 Identities = 75/354 (21%), Positives = 145/354 (40%), Gaps = 31/354 (8%)
 Frame = +1

Query: 1096 VIRRYSDFVWLMEYLLEKYPFRVIPGLPPKK---FTVGASPDSQFLQRRRRGLHRFLNQL 1266
            V RRYSD + L + LL ++P  +IP LP KK   +  G     +F Q+R   L  FL ++
Sbjct: 75   VHRRYSDLLLLHDILLNRFPTCIIPPLPDKKVFQYIAGDRFSQRFTQKRCHSLQNFLRRV 134

Query: 1267 IKHPILSQEPIVQSFLTVPTDLTTWKKQAKI-DSSLEFKGQKIQTDFINVIWPI--MGEP 1437
              HP LSQ  + ++FL V  D   W+   K+   SL+    ++   F+N    +    E 
Sbjct: 135  SLHPDLSQSKVFKTFL-VSKD---WESHRKVLQDSLQPNKDEVTDAFMNAFKTVHKQNEE 190

Query: 1438 FLKKWRQAEENIQFIIDKWV-KIIILVERYERRQQQISFDNGKFAEMLNGFSKLNTKIYP 1614
            F +   ++++     +D+ V KI  L  +  ++   +S D  K    L    +L T    
Sbjct: 191  FTEIREKSDK-----LDRTVTKIDKLFHKVVKKNDSMSEDYTKLGSNLQELQELVTGENE 245

Query: 1615 XXXXXXXXXXXXXXXXXXXXXXXXXYKQDFDFNSSGDIININQCLNSIGEFFNKSSQVLI 1794
                                     Y    D+    D+ ++   ++S+ +      Q  I
Sbjct: 246  ELAAKLKIFNEGVTQLSYGLQDLTKY---LDYEYIVDLKDLEHYIDSMRQLIKLKDQKQI 302

Query: 1795 DESYIIN--TKTLEKFKNYLD-------YLNSLQELF----ERTKQLSINQIDLLDKRIK 1935
            D   + +  T+++++  N +        + N L+EL     E +++  IN+++     + 
Sbjct: 303  DYEELSDYLTRSIKEKNNLISGYGGSNFFANKLEELAGINQEASRREKINKLEGKITSLT 362

Query: 1936 DQEIKFKKIS-----------EENPDIKGGELIKLRQSIINDKQEIFQQLNKDW 2064
             +    KK++           +    +K  E+ K   S+ +   E ++++ + W
Sbjct: 363  GELENAKKVADGFEQECLKEIDHFESVKTAEIKKSLGSLADHHIEFYERILEAW 416


>gi|17380569|sp|Q13596|SNX1_HUMAN Sorting nexin 1
          Length = 522

 Score = 56.2 bits (134), Expect = 4e-07
 Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 13/116 (11%)
 Frame = +1

Query: 1006 PEKEGI-IFKHINYMITHDLKIGGTSSGTKKVIRRYSDFVWLMEYLLEKYP---FRVIPG 1173
            PEK G  +  ++ Y +T    +    S    V RR+SDF+ L E L EK+    F V P 
Sbjct: 152  PEKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPP- 210

Query: 1174 LPPKKFTVGA---------SPDSQFLQRRRRGLHRFLNQLIKHPILSQEPIVQSFL 1314
             PP+K  +G          S  ++FL++RR  L R+L +++ HP + Q+P V+ FL
Sbjct: 211  -PPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFL 265


>gi|20140232|sp|Q9CWK8|SNX2_MOUSE Sorting nexin 2
          Length = 519

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
 Frame = +1

Query: 898  IAPNVDSSYIEKYI--NDIKDQFKPLFSGIDLIKIK---EVPEKEGI-IFKHINYMITHD 1059
            IAP ++S  I   +  +  +D+ +   +G D+  I+     PEK G  +  ++ Y +T  
Sbjct: 109  IAPRIESKSISAPVIFDRSRDEIEEEANG-DIFDIEIGVSDPEKVGDGMNAYMAYRVTTK 167

Query: 1060 LKIGGTSSGTKKVIRRYSDFVWLMEYLLEKY----------PFRVIPGLPPKKFTVGASP 1209
              +   S     V RR+SDF+ L   L  KY          P + I G+   K     S 
Sbjct: 168  TSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTKVKVGKEDSS 227

Query: 1210 DSQFLQRRRRGLHRFLNQLIKHPILSQEPIVQSFL 1314
             ++F+++RR  L R+L + +KHP L Q+P ++ FL
Sbjct: 228  STEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFL 262


>gi|59800468|sp|O14243|YELC_SCHPO Hypothetical protein C6F6.12 in chromosome I
          Length = 401

 Score = 55.5 bits (132), Expect = 6e-07
 Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
 Frame = +1

Query: 1009 EKEGIIFKHINYMITHDLKIGGTSSGTKKVIRRYSDFVWLMEYLLEKYPFRVIPGLPPK- 1185
            E +G    H++Y+I     +   +    KV RR+SDFV L E L       V+P LP K 
Sbjct: 28   ELQGSRDTHVSYLIITKTNLSIFTRAECKVRRRFSDFVKLQEILSRMNEDCVVPPLPAKH 87

Query: 1186 --KFTVGASPDSQFLQRRRRGLHRFLNQLIKHPILSQEPIVQSFLTVP 1323
              ++  G      F+ RR + L+R++ +   HP+L Q P   +FL  P
Sbjct: 88   KLEYIKGGRFSDNFINRRAKLLNRYITRCALHPVLHQSPHFIAFLENP 135


>gi|12643623|sp|O60749|SNX2_HUMAN Sorting nexin 2
          Length = 519

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
 Frame = +1

Query: 1006 PEKEGI-IFKHINYMITHDLKIGGTSSGTKKVIRRYSDFVWLMEYLLEKY---------- 1152
            PEK G  +  ++ Y +T    +   S     V RR+SDF+ L   L  KY          
Sbjct: 149  PEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPA 208

Query: 1153 PFRVIPGLPPKKFTVGASPDSQFLQRRRRGLHRFLNQLIKHPILSQEPIVQSFL 1314
            P + I G+   K     S  ++F+++RR  L R+L + +KHP L Q+P ++ FL
Sbjct: 209  PEKSIVGMTKVKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFL 262


>gi|14916716|sp|Q9Y5W9|SNX11_HUMAN Sorting nexin 11
          Length = 270

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
 Frame = +1

Query: 1009 EKEGIIFKHINYMITHDLKIGGTSSGTKKVIRRYSDFVWLMEYLLEKYPFRVIPGLPPKK 1188
            + EG    +++Y I         ++ T  V RRY +FVWL + L        +P LP K 
Sbjct: 27   QNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKS 86

Query: 1189 FTVGASPDSQFLQRRRRGLHRFLNQLIKHPILSQEP----IVQSFLTVP 1323
               G S   +F+++RR+GL  FL ++++  +L  +      +QS L+VP
Sbjct: 87   TFFGTS--DEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQLSVP 133


>gi|12643956|sp|Q9Y5X1|SNX9_HUMAN Sorting nexin 9 (SH3 and PX domain-containing protein 1) (SDP1
            protein)
          Length = 595

 Score = 49.7 bits (117), Expect = 3e-05
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1033 HINYMITHDLKIGGTSSGTKKVIRRYSDFVWLMEYLLEKYPFRV-IPGLPPKKFTVGASP 1209
            +I Y +T        ++  + V  RY  F WL E LL K+   + IP LP K+ T     
Sbjct: 269  YIEYQLT-------PTNTNRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVT--GRF 319

Query: 1210 DSQFLQRRRRGLHRFLNQLIKHPILSQEPIVQSFLTVPTDLTTWK 1344
            + +F++ R   L  ++ ++ +HP++S+  + Q FL    D   WK
Sbjct: 320  EEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNF-RDEKEWK 363


>gi|23822178|sp|Q91VH2|SNX9_MOUSE Sorting nexin 9
          Length = 595

 Score = 49.3 bits (116), Expect = 4e-05
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1033 HINYMITHDLKIGGTSSGTKKVIRRYSDFVWLMEYLLEKYPFRV-IPGLPPKKFTVGASP 1209
            +I Y +T        ++  + V  RY  F WL E LL K+   + IP LP K+ T     
Sbjct: 269  YIEYQLT-------PTNTNRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVT--GRF 319

Query: 1210 DSQFLQRRRRGLHRFLNQLIKHPILSQEPIVQSFLTVPTDLTTWK 1344
            + +F++ R   L  ++ ++ +HP++S+  + Q FL    D   WK
Sbjct: 320  EEEFIKMRMERLQAWMTRMCRHPVVSESEVFQQFLNF-RDEKEWK 363


>gi|12643620|sp|O60493|SNX3_HUMAN Sorting nexin 3 (SDP3 protein)
          Length = 162

 Score = 48.1 bits (113), Expect = 1e-04
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
 Frame = +1

Query: 1096 VIRRYSDFVWLMEYLLEKYPFRVIPGLPPKKFTVGASP--------DSQFLQRRRRGLHR 1251
            V RRYSDF WL   L E+    V+P LP K F +   P        D  F++ R++GL +
Sbjct: 67   VRRRYSDFEWLRSEL-ERESKVVVPPLPGKAF-LRQLPFRGDDGIFDDNFIEERKQGLEQ 124

Query: 1252 FLNQLIKHPILSQEPIVQSFL 1314
            F+N++  HP+   E  +  FL
Sbjct: 125  FINKVAGHPLAQNERCLHMFL 145


>gi|51702138|sp|Q9C0U7|VPS5_SCHPO Vacuolar protein sorting-associated protein vps5
          Length = 576

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 26/77 (33%), Positives = 42/77 (54%)
 Frame = +1

Query: 1096 VIRRYSDFVWLMEYLLEKYPFRVIPGLPPKKFTVGASPDSQFLQRRRRGLHRFLNQLIKH 1275
            V RRY+DF +L + L   +P  +IP +P K+  V    D +F+++RR  L   L ++  H
Sbjct: 241  VQRRYNDFAFLYQLLSNNHPGCIIPPIPEKQ--VVGRFDDEFIEQRRAALEVMLRKISAH 298

Query: 1276 PILSQEPIVQSFLTVPT 1326
            P+L  +   + FL   T
Sbjct: 299  PVLRDDYSFKLFLEAET 315


>gi|10720280|sp|O70492|SNX3_MOUSE Sorting nexin 3 (SDP3 protein)
          Length = 162

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
 Frame = +1

Query: 1096 VIRRYSDFVWLMEYLLEKYPFRVIPGLPPKKFTVGASP-------DSQFLQRRRRGLHRF 1254
            V RRYSDF WL   L E+    V+P LP K F             D  F++ R++GL +F
Sbjct: 67   VRRRYSDFEWLRSEL-ERESKVVVPPLPGKAFLRHVPFRGDDGIFDDNFIEERKQGLEQF 125

Query: 1255 LNQLIKHPILSQEPIVQSFL 1314
            +N++  HP+   E  +  FL
Sbjct: 126  INKVAGHPLAQNERCLHMFL 145


>gi|10720281|sp|O70493|SNX12_MOUSE Sorting nexin 12 (SDP8 protein)
          Length = 165

 Score = 46.2 bits (108), Expect = 4e-04
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
 Frame = +1

Query: 1096 VIRRYSDFVWLMEYLLEKYPFRVIPGLP-------PKKFTVGASPDSQFLQRRRRGLHRF 1254
            V RRYSDF WL   L E+    V+P LP       P +   G   +S F++ RR+GL +F
Sbjct: 68   VRRRYSDFEWLKNEL-ERDSKIVVPPLPGKALKRHPFRGDEGIFEES-FIEERRQGLEQF 125

Query: 1255 LNQLIKHPILSQEPIVQSFL 1314
            +N++  HP+   E  +  FL
Sbjct: 126  INKIAGHPLAQNERCLHMFL 145


>gi|2499128|sp|Q92331|VPS5_YEAST Vacuolar protein sorting-associated protein VPS5
          Length = 675

 Score = 46.2 bits (108), Expect = 4e-04
 Identities = 30/92 (32%), Positives = 50/92 (54%)
 Frame = +1

Query: 1093 KVIRRYSDFVWLMEYLLEKYPFRVIPGLPPKKFTVGASPDSQFLQRRRRGLHRFLNQLIK 1272
            +V RRY DF WL   L   +  +VIP  PP+K +VG+  ++ F++ RR  +   L ++ +
Sbjct: 316  QVSRRYRDFRWLYRQLQNNHWGKVIPP-PPEKQSVGSFKEN-FIENRRFQMESMLKKICQ 373

Query: 1273 HPILSQEPIVQSFLTVPTDLTTWKKQAKIDSS 1368
             P+L ++     FLT     +  KK+A +  S
Sbjct: 374  DPVLQKDKDFLLFLTSDDFSSESKKRAFLTGS 405


>gi|50403807|sp|Q9UMY4|SNX12_HUMAN Sorting nexin 12
          Length = 172

 Score = 45.8 bits (107), Expect = 5e-04
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
 Frame = +1

Query: 1096 VIRRYSDFVWLMEYLLEKYPFRVIPGLP--------PKKFTVGASPDSQFLQRRRRGLHR 1251
            V RRYSDF WL   L E+    V+P LP        P +   G   +S F++ RR+GL +
Sbjct: 68   VRRRYSDFEWLKNEL-ERDSKIVVPPLPGKALKRQLPFRGDEGIFEES-FIEERRQGLEQ 125

Query: 1252 FLNQLIKHPILSQEPIVQSFL 1314
            F+N++  HP+   E  +  FL
Sbjct: 126  FINKIAGHPLAQNERCLHMFL 146


>gi|10720287|sp|Q9Y5X0|SNX10_HUMAN Sorting nexin 10
          Length = 201

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 29/102 (28%), Positives = 49/102 (48%)
 Frame = +1

Query: 1009 EKEGIIFKHINYMITHDLKIGGTSSGTKKVIRRYSDFVWLMEYLLEKYPFRVIPGLPPKK 1188
            +KE     +I+Y I         +  T  V RRY +FVWL + L        +P LP K 
Sbjct: 21   QKEDFWHSYIDYEICIHTNSMCFTMKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKN 80

Query: 1189 FTVGASPDSQFLQRRRRGLHRFLNQLIKHPILSQEPIVQSFL 1314
                 + + Q + +RR+GL  FL +++++ +L  +  +  FL
Sbjct: 81   LFFNMN-NRQHVDQRRQGLEDFLRKVLQNALLLSDSSLHLFL 121


>gi|13124557|sp|P57768|SNX16_HUMAN Sorting nexin 16
          Length = 343

 Score = 42.4 bits (98), Expect = 0.005
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
 Frame = +1

Query: 1096 VIRRYSDFVWLMEYLLEKYP-FRVIPGLPPKKFTVGASPDSQFLQRRRRGLHRFLNQLIK 1272
            V RRY+DF  L + L E +P FR+   LPPK++    + ++ FL+ R+ GL  FL  L+ 
Sbjct: 141  VFRRYTDFSRLNDKLKEMFPGFRL--ALPPKRW-FKDNYNADFLEDRQLGLQAFLQNLVA 197

Query: 1273 HPILSQEPIVQSFLTV---PTDLTTWKKQAKIDSSLEFKGQKIQTDFI 1407
            H  ++    V+ FL +   P    + ++      +LE    ++Q + +
Sbjct: 198  HKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRLQKELL 245


>gi|61216767|sp|Q04053|SNX41_YEAST Sorting nexin 41
          Length = 625

 Score = 42.4 bits (98), Expect = 0.005
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
 Frame = +1

Query: 1093 KVIRRYSDFVWLMEYLLEKYPFRVIPGLPPKK-------FTVGASPDSQFLQRRRRGLHR 1251
            K+IRRYS+F  L + L    P  +IP +P K          + A+ DS+ +  R++ L+ 
Sbjct: 149  KIIRRYSEFHSLRQSLTRLLPTIIIPPIPSKHSLLKYIWSPINAANDSKIISTRKKMLNS 208

Query: 1252 FLNQLIKHPILSQEPIVQSFL 1314
            FL+  +    +S + + Q FL
Sbjct: 209  FLSNCLNIQEISNDIVFQKFL 229


>gi|13124541|sp|P57769|SNX16_RAT Sorting nexin 16
          Length = 344

 Score = 41.6 bits (96), Expect = 0.009
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
 Frame = +1

Query: 1096 VIRRYSDFVWLMEYLLEKYP-FRVIPGLPPKKFTVGASPDSQFLQRRRRGLHRFLNQLIK 1272
            V RRY+DF  L + L E +P FR+   LPPK++    + ++ FL+ R+ GL  FL  L+ 
Sbjct: 141  VFRRYTDFSRLNDKLKEMFPGFRL--ALPPKRW-FKDNYNADFLEDRQLGLQAFLQNLVA 197

Query: 1273 HPILSQEPIVQSFL 1314
            H  ++    V+ FL
Sbjct: 198  HKDIANCLAVREFL 211


>gi|3123050|sp|Q15036|SNX17_HUMAN Sorting nexin 17
          Length = 470

 Score = 38.5 bits (88), Expect = 0.076
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = +1

Query: 1105 RYSDFVWLMEYLLEKYPFRVIPGLPPKKFTVGASPDSQFLQRRRRGLHRFLNQLIKHPIL 1284
            RYS  + L E L ++Y   V+P  PPKK     S     +++RR  L +++  + + P+L
Sbjct: 36   RYSQLLGLHEQLRKEYGANVLPAFPPKKL---FSLTPAEVEQRREQLEKYMQAVRQDPLL 92

Query: 1285 SQEPIVQSFL 1314
                   SFL
Sbjct: 93   GSSETFNSFL 102


>gi|418174|sp|P32912|VAM7_YEAST Vacuolar morphogenesis protein VAM7
          Length = 316

 Score = 37.4 bits (85), Expect = 0.17
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
 Frame = +1

Query: 1072 GTSSGTKKVIRRYSDFVWLMEYLLEK-------YPFRVIPGLPPKKFTVGASPDSQFLQR 1230
            G S+  K++ +RYS+F W ++  LE+       Y F   PG+  +++      D + +  
Sbjct: 30   GVSTPNKRLYKRYSEF-WKLKTRLERDVGSTIPYDFPEKPGVLDRRWQ-RRYDDPEMIDE 87

Query: 1231 RRRGLHRFLNQL 1266
            RR GL RFLN+L
Sbjct: 88   RRIGLERFLNEL 99


>gi|10720283|sp|Q08826|SNX3_YEAST Sorting nexin GRD19
          Length = 162

 Score = 37.0 bits (84), Expect = 0.22
 Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
 Frame = +1

Query: 1093 KVIRRYSDFVWLMEYLLEK-----YPFRVIPGLPPKKFTVGASPDSQFLQRRRRGLHRFL 1257
            KV RRYSDF +  + L+++     +P  ++P LP K   +     ++ ++ RR+GL+ ++
Sbjct: 77   KVRRRYSDFEFFRKCLIKEISMLNHPKVMVPHLPGK-ILLSNRFSNEVIEERRQGLNTWM 135

Query: 1258 NQLIKHPIL 1284
              +  HP+L
Sbjct: 136  QSVAGHPLL 144


>gi|61211719|sp|Q07528|ATG20_YEAST Sorting nexin 42 (Autophagy-related protein 20) (Cytoplasm to vacuole
            targeting protein 20)
          Length = 640

 Score = 36.2 bits (82), Expect = 0.38
 Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 33/145 (22%)
 Frame = +1

Query: 979  IDLIKIKEVPEKEGIIFKHINYMITHDLKIGGTSSGTKKVIRRYSDFVWLMEYLLEKYPF 1158
            I +++ K V E +G  +  I Y+I  +            V RRYSDF  L   L+  +P 
Sbjct: 161  IHILEAKRVSEGQGRAY--IAYVIQFE---------NSTVQRRYSDFESLRSILIRLFPM 209

Query: 1159 RVIPGLPPK-------KFTVGAS--------------------------PDSQFLQRRRR 1239
             +IP +P K       K   G+S                           D + ++ R R
Sbjct: 210  TLIPPIPEKQSIKNYGKSITGSSSKYLLPSEGSGSVDLSLSVIHASVNNSDEKLIRHRIR 269

Query: 1240 GLHRFLNQLIKHPILSQEPIVQSFL 1314
             L  FLN+L+ +  +++  I+  FL
Sbjct: 270  MLTEFLNKLLTNEEITKTSIITDFL 294


>gi|20140249|sp|Q9H3E2|SNX25_HUMAN Sorting nexin 25 (MSTP043)
          Length = 538

 Score = 35.4 bits (80), Expect = 0.64
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
 Frame = +1

Query: 1063 KIGGTSSGTKKVIRRYSDFVWLMEYLLEKYPFRVIPGLPPKKFTVGASPDSQFLQRRRRG 1242
            ++GG  +    V RR S+F  L   L E  P      LP        S D +F+++ +  
Sbjct: 236  EVGGVETKNWTVPRRLSEFQNLHRKLSECVPSLKKVQLPSLSKLPFKSIDQKFMEKSKNQ 295

Query: 1243 LHRFLNQLIKHPILSQEPIVQSFLTVPTD-LTTWKKQAKIDS-SLEFKGQKIQTDFIN 1410
            L++FL  L+    L Q   + +FL+   D L     Q K +S SL    +++  DF +
Sbjct: 296  LNKFLQNLLSDERLCQSEALYAFLSPSPDYLKVIDVQGKKNSFSLSSFLERLPRDFFS 353


>gi|20141813|sp|Q9Y5W7|SNX14_HUMAN Sorting nexin 14
          Length = 886

 Score = 34.7 bits (78), Expect = 1.1
 Identities = 22/74 (29%), Positives = 36/74 (48%)
 Frame = +1

Query: 1096 VIRRYSDFVWLMEYLLEKYPFRVIPGLPPKKFTVGASPDSQFLQRRRRGLHRFLNQLIKH 1275
            V RRY +F  L   L E +       LP K+       + +FL+ +R     +L +L++H
Sbjct: 553  VYRRYLEFYVLESKLTEFHGAFPDAQLPSKRII--GPKNYEFLKSKREEFQEYLQKLLQH 610

Query: 1276 PILSQEPIVQSFLT 1317
            P LS   ++  FL+
Sbjct: 611  PELSNSQLLADFLS 624


>gi|56748693|sp|Q6KHL2|CBO1_MYCMO Cobalt import ATP-binding protein cbiO 1
          Length = 308

 Score = 34.7 bits (78), Expect = 1.1
 Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 19/109 (17%)
 Frame = +1

Query: 904  PNVDSSYIEKYINDIKDQFKPLFSGIDLI---------KIKEVPEKEGIIFKHINYM--- 1047
            P++ S  I+    D KD+  P+    ++I         +IKE+  + GI+F+   Y    
Sbjct: 59   PSIGSIVIKGKFKDQKDKKNPVLIESEVILQKTKRKIKQIKEIRRQIGIVFQFAEYQLFE 118

Query: 1048 --ITHDLKIGGTSSGTKKV-----IRRYSDFVWLMEYLLEKYPFRVIPG 1173
              I  D+  G  S G  K       ++Y   V L E  L++ PF +  G
Sbjct: 119  STIEKDIAFGPISLGISKEEAYKRAKKYISIVGLPENYLQRSPFELSGG 167


>gi|731694|sp|P38815|YHQ5_YEAST Hypothetical 24.6 kDa protein in NRK1-TRR2 intergenic region
          Length = 214

 Score = 34.3 bits (77), Expect = 1.4
 Identities = 29/72 (40%), Positives = 35/72 (48%), Gaps = 16/72 (22%)
 Frame = +1

Query: 1102 RRYSDFVWLMEYLL--------EKYPFRVIPGLPP--------KKFTVGASPDSQFLQRR 1233
            +RYSDFV L E LL        EK     IP LPP        K   V  + D  +L +R
Sbjct: 121  KRYSDFVRLRENLLTRIKTAKPEKLNCLQIPHLPPSVQWYSSWKYQEVNLNKD--WLAKR 178

Query: 1234 RRGLHRFLNQLI 1269
            +RGL  FLN +I
Sbjct: 179  QRGLEYFLNHII 190


>gi|3123114|sp|Q58510|YB10_METJA Hypothetical protein MJ1110
          Length = 486

 Score = 34.3 bits (77), Expect = 1.4
 Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
 Frame = +1

Query: 1828 EKFKNYLDYLNSLQELFERTKQLSINQIDL--LDKRIKDQEIKFKKISEENPDIKGGELI 2001
            E+ K YL+    L  LF     +S   +D+  +++R K +E++ K+I E+    + GE I
Sbjct: 262  EEEKKYLNRYLELCLLFREEADISGGILDVRCMEER-KLKELELKEILEKEGLYRDGEPI 320

Query: 2002 KLRQSIINDKQEIFQQLNKDWLIKQ 2076
            +  +  I  K E+ ++++KD LIK+
Sbjct: 321  EPLKKAIKIKNELSKKISKDILIKR 345


>gi|14195303|sp|Q9WYA4|TRME_THEMA Probable tRNA modification GTPase trmE
          Length = 450

 Score = 33.5 bits (75), Expect = 2.4
 Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
 Frame = +1

Query: 1867 QELFERTKQ----LSINQIDLLDKRIKDQEIKFKKISEEN----PDIKGGELIKLRQSII 2022
            +++ ER K     + IN++D+++K I ++EIK K  ++ +      +KG  L KL +SI 
Sbjct: 310  RKILERIKNKRYLVVINKVDVVEK-INEEEIKNKLGTDRHMVKISALKGEGLEKLEESIY 368

Query: 2023 NDKQEIFQQ 2049
             + QEIF++
Sbjct: 369  RETQEIFER 377


>gi|20140234|sp|Q9D2Y5|SNX20_MOUSE Sorting nexin 20
          Length = 313

 Score = 33.1 bits (74), Expect = 3.2
 Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
 Frame = +1

Query: 985  LIKIKEVPEKEGIIFKHINYMITHDLKIGGTSSGTKKVIRRYSDFVWLMEYLLEKY-PFR 1161
            L +I     +E  + K + Y +   ++ G   S    V RRYSDF  L + LL+++ P  
Sbjct: 74   LFEIASARIEERKVSKFVMYQVVV-IQTGSFDSDKAVVERRYSDFERLQKALLKRFGPEL 132

Query: 1162 VIPGLPPKKFTVGASPDSQFLQRRRRGLHRFLNQLIKHPILSQEPIVQSFLTVP 1323
                 P K+ T   S ++  +  RRR L  +L  L     + +      FLT P
Sbjct: 133  EDVAFPRKRLTGNLSAET--ICERRRELREYLRLLYAVRAVRRSREFLDFLTRP 184


>gi|3913273|sp|Q66154|COAT_CMVAS Coat protein (Capsid protein) (CP)
          Length = 218

 Score = 33.1 bits (74), Expect = 3.2
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 6/115 (5%)
 Frame = -2

Query: 1259 FKNLCNPRRRLCKNCESGEAPTVN---FLGGN---PGITLNGYFSNKYSINHTKSEYLRM 1098
            F+ L     RL K   +G  PT+N   F+G     PG T +    N   I+  +  Y   
Sbjct: 32   FRVLSQQLSRLNKTLAAGR-PTINHPTFVGSERCKPGYTFSSITLNPPKID--RGSYYGK 88

Query: 1097 TFLVPELVPPIFKS*VXXXXXXXXXIPSFSGTSLILIKSIPENNGLN*SLISLIY 933
              L+P+ V    K  V         +P F  T  + ++ +P ++ L+ + IS ++
Sbjct: 89   RLLLPDSVTEFDKKLVSRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMF 143


>gi|20137893|sp|Q971T3|DHYS_SULTO Probable deoxyhypusine synthase (DHS)
          Length = 311

 Score = 33.1 bits (74), Expect = 3.2
 Identities = 16/60 (26%), Positives = 33/60 (55%)
 Frame = +1

Query: 1774 KSSQVLIDESYIINTKTLEKFKNYLDYLNSLQELFERTKQLSINQIDLLDKRIKDQEIKF 1953
            K  ++L++E   I   TLE+ K Y D+   L +++  T +  +  + +L   IK+ +++F
Sbjct: 2    KREELLVEE---IKDLTLEELKGYADFYKILDKVYGFTAESVVRGVKILKDMIKEADLRF 58


>gi|417366|sp|P20103|NISB_LACLA Nisin biosynthesis protein nisB
          Length = 993

 Score = 32.7 bits (73), Expect = 4.2
 Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
 Frame = +1

Query: 1765 FFNKSSQVLIDESYIINTKTLEKF-KNYLDY-----LNSLQELFERTKQLSIN----QID 1914
            F  K   +  D+ YII  K ++KF + Y +      +  L+E+++   Q+  N    QID
Sbjct: 240  FLTKVEAIDEDKKYIIPLKKVQKFIQEYSEIEIGEGIEKLKEIYQEMSQILENDNYIQID 299

Query: 1915 LLDKRIKDQEIKFKKISEENPDIKGGELIKLRQSIINDKQEIFQQLNKDWLIKQCCLQEF 2094
            L+     + ++K K+  E   +  G     +R++ ++D ++ F             ++++
Sbjct: 300  LISDSEINFDVKQKQQLEHLAEFLGNTTKSVRRTYLDDYKDKF-------------IEKY 346

Query: 2095 IIFQETQFLITELW 2136
             + QE Q  ITEL+
Sbjct: 347  GVDQEVQ--ITELF 358


>gi|21362931|sp|Q97FK1|SBCC_CLOAB Nuclease sbcCD subunit C
          Length = 1163

 Score = 32.7 bits (73), Expect = 4.2
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
 Frame = +1

Query: 1762 EFFNKSSQVLIDESYIINTKTLEKFKN---YLDYLNSLQELFERTKQLSINQIDLLDKRI 1932
            E  +K+   L ++  IIN K +E  KN    LD L  L+E  E T +    Q +L DK++
Sbjct: 787  EELSKNKAELKEKDKIINEK-IELIKNKVGVLDNLYELKEKIEGTIKKIEEQYNLCDKKM 845

Query: 1933 K----------DQEIKFKKISEENPDIKGGELIKLRQSIINDKQEIFQQLNKDWL 2067
                       D+ IK+        D K  ++ KL + ++ +K E  ++  +++L
Sbjct: 846  NEIEDKYRKCSDEIIKYHSNLSSLKDRKVNDIDKLNKILMEEKFENIEKAKENYL 900


>gi|113594|sp|P16116|ALDR_BOVIN Aldose reductase (AR) (Aldehyde reductase) (20-alpha-hydroxysteroid
            dehydrogenase) (20-alpha-HSD)
          Length = 315

 Score = 32.3 bits (72), Expect = 5.4
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
 Frame = +1

Query: 2026 DKQEIFQQLNKDWLIKQCCLQEFIIFQETQFLITELWVEW-CKDRLK--CQEKLVGL-YD 2193
            D   ++Q  N+  L  Q  LQE ++ +E  F++++LW  +  KD +K  CQ+ L  L  D
Sbjct: 43   DCAHVYQNENEVGLALQAKLQEQVVKREDLFIVSKLWCTYHDKDLVKGACQKTLSDLKLD 102

Query: 2194 NLNQEIIH 2217
             L+  +IH
Sbjct: 103  YLDLYLIH 110


>gi|730792|sp|P40612|SPAM_SALTY Surface presentation of antigens protein spaM (Invasion protein invI)
          Length = 147

 Score = 32.0 bits (71), Expect = 7.1
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
 Frame = +1

Query: 1864 LQELFERTKQLSINQI-------DLLDKRIKDQEIKFKKISEENPDIKGGELIKLRQSII 2022
            L  L    +QLS  +I        ++ ++IKD E++  +I E             ++S +
Sbjct: 53   LDTLRAENRQLSREEIYTLLRKQSIVRRQIKDLELQIIQIQE-------------KRSEL 99

Query: 2023 NDKQEIFQQLNKDWLIKQCCLQEFIIFQETQFLITELWVE 2142
              K+E FQ+ +K WL K+   Q +II Q+  ++  E+  E
Sbjct: 100  EKKREEFQKKSKYWLRKEGNYQRWIIRQKRFYIQREIQQE 139


>gi|22096034|sp|Q8R5W0|RF1_FUSNN Peptide chain release factor 1 (RF-1)
          Length = 365

 Score = 32.0 bits (71), Expect = 7.1
 Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
 Frame = +1

Query: 1780 SQVLIDESYIIN--TKTLEKFKNYLDYLNSLQELFERTK-QLSINQIDLLDKRIKDQEIK 1950
            S+ +I+ +  IN  T+ +EK+K Y  Y++ ++ + E  K +   +  ++L++ +K+ E K
Sbjct: 36   SKKMIECNKAINEITEIVEKYKEYKKYVDDIEFIKESFKTEKDSDMKEMLNEELKEAEEK 95

Query: 1951 FKKISEE 1971
              K+ EE
Sbjct: 96   LPKLEEE 102


>gi|32171840|sp|Q8EVM0|Y544_MYCPE Hypothetical UPF0144 protein MYPE5440
          Length = 469

 Score = 31.6 bits (70), Expect = 9.3
 Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
 Frame = +1

Query: 1924 KRIKDQEIKFKKISEENPD-IKGGELIKLRQSIINDKQEIFQQLNKDWL-IKQCCLQEFI 2097
            K+IK Q  K  KI+  +   +K  E I    SIIN K+EI      D+L IK+   QE  
Sbjct: 39   KQIKIQPKKNNKITPTSDQKLKADEFI----SIINKKREILNHQRADYLKIKE--TQE-- 90

Query: 2098 IFQETQFLITELWVEWCKDRLKCQEKL-VGLYDNLNQEIIHDM 2223
             +Q+ Q +I+E   +   +++K  +++   + DNLN++ ++ M
Sbjct: 91   SYQQLQEVISEYQKKLNLEKIKLIDQMEKEIKDNLNEKAVYYM 133


>gi|2506556|sp|P54988|NTRA_CHEHE Nta operon transcriptional regulator
          Length = 210

 Score = 31.6 bits (70), Expect = 9.3
 Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 4/134 (2%)
 Frame = +1

Query: 1789 LIDESYIINTKTLEKFKNYLDYLNSLQELFERTKQLSINQIDLLDKRIKDQEI----KFK 1956
            L  E ++  T     F   L+  N+L +L+E    L  + + L  +R  DQEI     F 
Sbjct: 36   LTTEGFLTTTANKGFFARVLE-ANTLFDLYELRAFLEQSAVRLACQRATDQEIAVLRDFL 94

Query: 1957 KISEENPDIKGGELIKLRQSIINDKQEIFQQLNKDWLIKQCCLQEFIIFQETQFLITELW 2136
               +E+ +I  GE++KL +        + Q  N++ L     + E I F          W
Sbjct: 95   LEQDESGEISAGEMLKLDEEFHFRLVGLSQ--NEELLKTVRSISERIRFAR--------W 144

Query: 2137 VEWCKDRLKCQEKL 2178
            ++W   RL  ++ L
Sbjct: 145  IDWQSRRLSHEQHL 158


Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 169283
Number of Hits to DB: 16528401
Number of extensions: 281022
Number of successful extensions: 791
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's gapped: 791
Number of HSP's successfully gapped: 1
Number of extra gapped extensions for HSPs above 10.0: 0
Length of query: 2238
Length of database: 62311297
Length adjustment: 118
Effective length of query: 2120
Effective length of database: 42335903
Effective search space: 89752114360
Effective search space used: 26586947084
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (15.0 bits)
X3: 64 (25.0 bits)
S1: 41 (22.0 bits)
S2: 70 (31.6 bits)