BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Candida_albicans_chr7-f1-202678-203085-3
         (405 letters)

Database: sptrembl 
           1,070,300 sequences; 339,323,595 total letters

Searching.................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

P35271|(RPS18A|RS18_YEAST (SP: Saccharomyces cerevisiae (Baker's...   230   2e-60
Q8ISP0||Q8ISP0 (TrEMBL: Branchiostoma belcheri (Amphoxius)) Ribo...   204   1e-52
O94754|(RPS18A|RS18_SCHPO (SP: Schizosaccharomyces pombe (Fissio...   202   8e-52
P25232|RPS18|RS18_HUMAN (SP: Sus scrofa (Pig)) 40S ribosomal pro...   200   2e-51
Q9GPA9||Q9GPA9 (TrEMBL: Cherax destructor (Yabbie)) Ribosomal pr...   199   4e-51
Q90YQ5||Q90YQ5 (TrEMBL: Ictalurus punctatus (Channel catfish)) 4...   199   5e-51
Q8IT98||Q8IT98 (TrEMBL: Aequipecten irradians (Bay scallop)) Rib...   199   5e-51
Q8JGS9|RPS18|Q8JGS9 (TrEMBL: Brachydanio rerio (Zebrafish) (Dani...   198   9e-51
Q962R1||Q962R1 (TrEMBL: Spodoptera frugiperda (Fall armyworm)) R...   195   7e-50
Q8MT19|BCDNA:RH43343|Q8MT19 (TrEMBL: Drosophila melanogaster (Fr...   194   2e-49
P41094|RPS18|RS18_DROME (SP: Drosophila melanogaster (Fruit fly)...   194   2e-49
Q8H590|OJ1656_E11.4|Q8H590 (TrEMBL: Oryza sativa (japonica culti...   192   8e-49
Q8H588|OJ1656_E11.6|Q8H588 (TrEMBL: Oryza sativa (japonica culti...   191   1e-48
P34788|(RPS18C|RS18_ARATH (SP: Arabidopsis thaliana (Mouse-ear c...   187   2e-47
O18240|Y57G11C.16|O18240 (TrEMBL: Caenorhabditis elegans) Y57G11...   185   8e-47
Q8L806||Q8L806 (TrEMBL: Triticum aestivum (Wheat)) Putative ribo...   185   1e-46
Q9IAC0|KE3|Q9IAC0 (TrEMBL: Brachydanio rerio (Zebrafish) (Danio ...   184   2e-46
Q869U7||Q869U7 (TrEMBL: Dictyostelium discoideum (Slime mold)) S...   182   6e-46
Q862S8||Q862S8 (TrEMBL: Bos taurus (Bovine)) Similar to ribosoma...   181   1e-45
Q861U5||Q861U5 (TrEMBL: Bos taurus (Bovine)) Similar to 40S ribo...   181   1e-45
Q8IIA2|PF11_0272|Q8IIA2 (TrEMBL: Plasmodium falciparum (isolate ...   179   4e-45
P49202|RPS18|RS18_CHLRE (SP: Chlamydomonas reinhardtii) 40S ribo...   179   5e-45
P48151|RPS18|RS18_ENTHI (SP: Entamoeba histolytica) 40S ribosoma...   173   4e-43
Q9XSU5|RPS18|Q9XSU5 (TrEMBL: Canis familiaris (Dog)) Ribosomal p...   142   6e-34
Q9Z291||Q9Z291 (TrEMBL: Cricetulus sp) Ribosomal protein S18 (Fr...   135   9e-32
O74021|RPS13P|RS13_PYRHO (SP: Pyrococcus horikoshii) 30S ribosom...   115   7e-26
Q8TVC1|RPS13P|RS13_METKA (SP: Methanopyrus kandleri) 30S ribosom...   113   4e-25
Q9V1A0|RPS13P|RS13_PYRAB (SP: Pyrococcus abyssi) 30S ribosomal p...   113   4e-25
O26141|RPS13P|RS13_METTH (SP: Methanobacterium thermoautotrophic...   113   4e-25
Q8SRP2|ECU06_1110|Q8SRP2 (TrEMBL: Encephalitozoon cuniculi) 40S ...   112   6e-25

>P35271|(RPS18A|RS18_YEAST (SP: Saccharomyces cerevisiae (Baker's
           yeast)) 40S ribosomal protein S18.
          Length = 146

 Score =  230 bits (587), Expect = 2e-60
 Identities = 110/129 (85%), Positives = 119/129 (92%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           LLNTN+DG IKI+YALT I+GVGRRY+NLVCKKADV+L KRAGELTQEELERIV IMQNP
Sbjct: 17  LLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNP 76

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
           T+YKIPAWFLNRQ D  DGKDYH LANN+ESKLRDDLERLKKIR+HRGIRHFWGL+VRGQ
Sbjct: 77  THYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRGQ 136

Query: 379 HTKTTSRGR 405
           HTKTT R R
Sbjct: 137 HTKTTGRRR 145


>Q8ISP0||Q8ISP0 (TrEMBL: Branchiostoma belcheri (Amphoxius))
           Ribosomal protein S18.
          Length = 152

 Score =  204 bits (520), Expect = 1e-52
 Identities = 93/127 (73%), Positives = 115/127 (90%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           ++NTNIDGR KIM+ALT I+GVGRRY+N+VCKKAD++L+KRAGEL+ EE+ER++TIMQNP
Sbjct: 15  VMNTNIDGRRKIMFALTSIKGVGRRYSNIVCKKADIDLSKRAGELSDEEVERLITIMQNP 74

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             YKIP WFLNRQKD  DGK   V+AN+L++KLR+DLERLKKIR+HRG+RH+WGL+VRGQ
Sbjct: 75  RQYKIPDWFLNRQKDVKDGKYSQVMANSLDNKLREDLERLKKIRAHRGLRHYWGLRVRGQ 134

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 135 HTKTTGR 141


>O94754|(RPS18A|RS18_SCHPO (SP: Schizosaccharomyces pombe (Fission
           yeast)) 40S ribosomal protein S18.
          Length = 152

 Score =  202 bits (513), Expect = 8e-52
 Identities = 91/127 (71%), Positives = 117/127 (92%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           LLNTN+DG++K+M+A+T+I+GVGRRYAN+VCKKAD++++KRAGELT EELERIVTI+QNP
Sbjct: 15  LLNTNVDGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELTTEELERIVTIIQNP 74

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
           + +KIP+WFLNRQKD  DGK + +LANN++SKLR+DLERLKKI++HRG+RH   L+VRGQ
Sbjct: 75  SQFKIPSWFLNRQKDINDGKSFQLLANNVDSKLREDLERLKKIQTHRGLRHALDLRVRGQ 134

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 135 HTKTTGR 141


>P25232|RPS18|RS18_HUMAN (SP: Sus scrofa (Pig)) 40S ribosomal
           protein S18 (KE-3) (KE3).
          Length = 152

 Score =  200 bits (509), Expect = 2e-51
 Identities = 93/127 (73%), Positives = 113/127 (88%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           +LNTNIDGR KI +A+T I+GVGRRYA++V +KAD++LTKRAGELT++E+ER++TIMQNP
Sbjct: 15  VLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNP 74

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             YKIP WFLNRQKD  DGK   VLAN L++KLR+DLERLKKIR+HRG+RHFWGL+VRGQ
Sbjct: 75  RQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQ 134

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 135 HTKTTGR 141


>Q9GPA9||Q9GPA9 (TrEMBL: Cherax destructor (Yabbie)) Ribosomal
           protein S18 (Fragment).
          Length = 142

 Score =  199 bits (507), Expect = 4e-51
 Identities = 91/127 (71%), Positives = 113/127 (88%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           L+NTNIDGR K+M+A+T I+GVGRRY+N+V KKAD++ +KRAGE+T+EE+E+IVTIM NP
Sbjct: 5   LMNTNIDGRRKVMFAMTAIKGVGRRYSNIVLKKADIDQSKRAGEMTEEEVEKIVTIMSNP 64

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             YKIP WFLNRQKD  DGK   V++NNLE+KLR+DLER+KKIR+HRG+RHFWGL+VRGQ
Sbjct: 65  RQYKIPDWFLNRQKDIKDGKYSQVMSNNLETKLREDLERMKKIRAHRGLRHFWGLRVRGQ 124

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 125 HTKTTGR 131


>Q90YQ5||Q90YQ5 (TrEMBL: Ictalurus punctatus (Channel catfish)) 40S
           ribosomal protein S18.
          Length = 152

 Score =  199 bits (506), Expect = 5e-51
 Identities = 93/127 (73%), Positives = 113/127 (88%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           +LNTNIDGR KI +A+T I+GVGRRYA++V +KAD++L+KRAGELT++E+ER+VTIMQNP
Sbjct: 15  VLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIMQNP 74

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             YKIP WFLNRQKD  DGK   VLAN L++KLR+DLERLKKIR+HRG+RHFWGL+VRGQ
Sbjct: 75  RQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQ 134

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 135 HTKTTGR 141


>Q8IT98||Q8IT98 (TrEMBL: Aequipecten irradians (Bay scallop))
           Ribosomal protein S18.
          Length = 152

 Score =  199 bits (506), Expect = 5e-51
 Identities = 89/127 (70%), Positives = 114/127 (89%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           ++NTNIDG+ KIM+A+T I+G+GRRYAN+VCKKADV++TKRAGEL+++E+ER++TIM NP
Sbjct: 15  VMNTNIDGKRKIMFAMTAIKGMGRRYANVVCKKADVDITKRAGELSEDEIERVITIMSNP 74

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             YKIP WFLNRQKD  DGK   V++N L++KLR+DLERLKKIR+HRG+RH+WGL+VRGQ
Sbjct: 75  RQYKIPNWFLNRQKDVKDGKYSQVMSNALDNKLREDLERLKKIRAHRGLRHYWGLRVRGQ 134

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 135 HTKTTGR 141


>Q8JGS9|RPS18|Q8JGS9 (TrEMBL: Brachydanio rerio (Zebrafish) (Danio
           rerio)) 40S ribosomal protein S18.
          Length = 152

 Score =  198 bits (504), Expect = 9e-51
 Identities = 93/127 (73%), Positives = 112/127 (88%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           +LNTNIDGR KI +A+T I+GVGRRYA++V +KAD++L KRAGELT++E+ER+VTIMQNP
Sbjct: 15  VLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIMQNP 74

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             YKIP WFLNRQKD  DGK   VLAN L++KLR+DLERLKKIR+HRG+RHFWGL+VRGQ
Sbjct: 75  RQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQ 134

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 135 HTKTTGR 141


>Q962R1||Q962R1 (TrEMBL: Spodoptera frugiperda (Fall armyworm))
           Ribosomal protein S18.
          Length = 152

 Score =  195 bits (496), Expect = 7e-50
 Identities = 89/127 (70%), Positives = 112/127 (88%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           ++NTNIDG+ K+M+A+T I+GVGRRY+N+V KKAD++L KRAGE T+EE+E+IVTIM NP
Sbjct: 15  IMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNP 74

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             YKIP WFLNRQKD VDGK   + ++NL+SKLR+DLERLKKIR+HRG+RH+WGL+VRGQ
Sbjct: 75  RQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 134

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 135 HTKTTGR 141


>Q8MT19|BCDNA:RH43343|Q8MT19 (TrEMBL: Drosophila melanogaster (Fruit
           fly)) RH43343p.
          Length = 152

 Score =  194 bits (493), Expect = 2e-49
 Identities = 87/127 (68%), Positives = 112/127 (88%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           ++NTNIDG+ K+  A+T I+GVGRRY+N+V KKADV+LTKRAGE T+EE++++VTI+ NP
Sbjct: 15  IMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNP 74

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             YK+P WFLNRQKD +DGK + + ++NL+SKLRDDLERLKKIRSHRG+RH+WGL+VRGQ
Sbjct: 75  LQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQ 134

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 135 HTKTTGR 141


>P41094|RPS18|RS18_DROME (SP: Drosophila melanogaster (Fruit fly))
           40S ribosomal protein S18.
          Length = 152

 Score =  194 bits (493), Expect = 2e-49
 Identities = 87/127 (68%), Positives = 112/127 (88%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           ++NTNIDG+ K+  A+T I+GVGRRY+N+V KKADV+LTKRAGE T+EE++++VTI+ NP
Sbjct: 15  IMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNP 74

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             YK+P WFLNRQKD +DGK + + ++NL+SKLRDDLERLKKIRSHRG+RH+WGL+VRGQ
Sbjct: 75  LQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQ 134

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 135 HTKTTGR 141


>Q8H590|OJ1656_E11.4|Q8H590 (TrEMBL: Oryza sativa (japonica
           cultivar-group)) Putative ribosomal protein S18
           (Putative ribosomal protein S18A).
          Length = 152

 Score =  192 bits (487), Expect = 8e-49
 Identities = 85/127 (66%), Positives = 110/127 (86%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           LLNTN+DG+ KIM+ALT I+GVGRR++N+ CKKAD+++ KRAGELT EELER++T++ NP
Sbjct: 15  LLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGELTPEELERLMTVVANP 74

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             +K+P WFLNR+KD  DG+   V++N L+ KLRDDLERLKKIR+HRG+RH+WGL+VRGQ
Sbjct: 75  RQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 135 HTKTTGR 141


>Q8H588|OJ1656_E11.6|Q8H588 (TrEMBL: Oryza sativa (japonica
           cultivar-group)) Putative ribosomal protein S18.
          Length = 148

 Score =  191 bits (486), Expect = 1e-48
 Identities = 84/127 (66%), Positives = 110/127 (86%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           LLNTN+DG+ KIM+ALT I+G+GRR++N+ CKKAD+++ KRAGELT EELER++T++ NP
Sbjct: 11  LLNTNVDGKQKIMFALTSIKGIGRRFSNIACKKADIDMNKRAGELTPEELERLMTVVANP 70

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             +K+P WFLNR+KD  DG+   V++N L+ KLRDDLERLKKIR+HRG+RH+WGL+VRGQ
Sbjct: 71  RQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 130

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 131 HTKTTGR 137


>P34788|(RPS18C|RS18_ARATH (SP: Arabidopsis thaliana (Mouse-ear
           cress)) 40S ribosomal protein S18.
          Length = 152

 Score =  187 bits (476), Expect = 2e-47
 Identities = 85/127 (66%), Positives = 108/127 (85%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           +LNTN+DG+ KIM+ALT I+G+GRR AN+VCKKADV++ KRAGEL+  E++ ++TI+ NP
Sbjct: 15  VLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIVANP 74

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             +KIP WFLNRQKD  DGK   V++N L+ KLRDDLERLKKIR+HRG+RH+WGL+VRGQ
Sbjct: 75  RQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 135 HTKTTGR 141


>O18240|Y57G11C.16|O18240 (TrEMBL: Caenorhabditis elegans)
           Y57G11C.16 protein.
          Length = 154

 Score =  185 bits (470), Expect = 8e-47
 Identities = 84/131 (64%), Positives = 110/131 (83%)
 Frame = +1

Query: 7   YYYSLLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTI 186
           + + ++NTNIDG  K+ YALT I+GVGRR+A + C+KADV++ KRAGELT+E+ ++IVTI
Sbjct: 11  HIHRVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELTEEDFDKIVTI 70

Query: 187 MQNPTNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLK 366
           MQNP+ YKIP WFLNRQKD  DGK   +L+  +++KLR+DLER+KKIR HRG+RH+WGL+
Sbjct: 71  MQNPSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLR 130

Query: 367 VRGQHTKTTSR 399
           VRGQHTKTT R
Sbjct: 131 VRGQHTKTTGR 141


>Q8L806||Q8L806 (TrEMBL: Triticum aestivum (Wheat)) Putative
           ribosomal protein S18.
          Length = 152

 Score =  185 bits (469), Expect = 1e-46
 Identities = 79/127 (62%), Positives = 110/127 (86%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           +LNTN+DG+ KIM+ALT I+GVGRR++N+VCKKAD+++ KRAGEL+ EE++R++ ++ NP
Sbjct: 15  VLNTNVDGKQKIMFALTSIKGVGRRFSNIVCKKADIDMNKRAGELSAEEMDRLMAVVHNP 74

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             +K+P WFLNR+KD  DG+   V++N ++ KLRDDLERLKKIR+HRG+RH+WG++VRGQ
Sbjct: 75  RQFKVPDWFLNRKKDYKDGRFSQVVSNAVDMKLRDDLERLKKIRNHRGLRHYWGVRVRGQ 134

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 135 HTKTTGR 141


>Q9IAC0|KE3|Q9IAC0 (TrEMBL: Brachydanio rerio (Zebrafish) (Danio
           rerio)) Ke3 (Fragment).
          Length = 126

 Score =  184 bits (466), Expect = 2e-46
 Identities = 86/119 (72%), Positives = 104/119 (87%)
 Frame = +1

Query: 43  RIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNPTNYKIPAW 222
           R KI +A+T I+GVGRRYA++V +KAD++L KRAGELT++E+ER+VTIMQNP  YKIP W
Sbjct: 1   RRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIMQNPRQYKIPDW 60

Query: 223 FLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQHTKTTSR 399
           FLNRQKD  DGK   VLAN L++KLR+DLERLKKIR+HRG+RHFWGL+VRGQHTKTT R
Sbjct: 61  FLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR 119


>Q869U7||Q869U7 (TrEMBL: Dictyostelium discoideum (Slime mold))
           Similar to Branchiostoma belcheri (Amphoxius). ribosomal
           protein S18.
          Length = 154

 Score =  182 bits (462), Expect = 6e-46
 Identities = 84/127 (66%), Positives = 105/127 (82%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           + NTN+DGR KI YALT ++GVGRR+ANLVCKKAD++ +KRAGEL+++E+ER+ TIM +P
Sbjct: 17  IYNTNVDGRRKIQYALTCVKGVGRRFANLVCKKADIDTSKRAGELSKDEVERLTTIMNHP 76

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             Y IP WFLNRQKD  DGK  H LAN ++ K R+DLERLKKIR+HRG+RH +GL+VRGQ
Sbjct: 77  RQYNIPTWFLNRQKDIKDGKYSHCLANQIDVKFREDLERLKKIRAHRGVRHHFGLRVRGQ 136

Query: 379 HTKTTSR 399
            TKTT R
Sbjct: 137 KTKTTGR 143


>Q862S8||Q862S8 (TrEMBL: Bos taurus (Bovine)) Similar to ribosomal
           protein S18 (Fragment).
          Length = 125

 Score =  181 bits (460), Expect = 1e-45
 Identities = 84/117 (71%), Positives = 104/117 (88%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           +LNTNIDGR KI +A+T I+GVGRRYA++V +KAD++LTKRAGELT++E+ER++TIMQNP
Sbjct: 9   VLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNP 68

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKV 369
             YKIP WFLNRQKD  DGK   VLAN L++KLR+DLERLKKIR+HRG+RHFWGL+V
Sbjct: 69  RQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 125


>Q861U5||Q861U5 (TrEMBL: Bos taurus (Bovine)) Similar to 40S
           ribosomal protein S18 (Fragment).
          Length = 131

 Score =  181 bits (460), Expect = 1e-45
 Identities = 84/117 (71%), Positives = 104/117 (88%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           +LNTNIDGR KI +A+T I+GVGRRYA++V +KAD++LTKRAGELT++E+ER++TIMQNP
Sbjct: 15  VLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNP 74

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKV 369
             YKIP WFLNRQKD  DGK   VLAN L++KLR+DLERLKKIR+HRG+RHFWGL+V
Sbjct: 75  RQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131


>Q8IIA2|PF11_0272|Q8IIA2 (TrEMBL: Plasmodium falciparum (isolate
           3D7)) Ribosomal protein S18, putative.
          Length = 156

 Score =  179 bits (455), Expect = 4e-45
 Identities = 81/127 (63%), Positives = 106/127 (83%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           +LNTN+DG+ K++ ALT I+G+G+R A ++CK+A+V+ TKRAGELT EE++ IV IM  P
Sbjct: 17  ILNTNVDGKEKVIIALTAIKGIGKRMATVICKQANVDPTKRAGELTTEEIDNIVHIMSTP 76

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
           T +KIP WFLNR+KD  +GK+ HV+AN L+S LR+DLER+KKIR HRG+RH WGL+VRGQ
Sbjct: 77  TQFKIPDWFLNRRKDLKEGKNIHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRVRGQ 136

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 137 HTKTTGR 143


>P49202|RPS18|RS18_CHLRE (SP: Chlamydomonas reinhardtii) 40S
           ribosomal protein S18.
          Length = 153

 Score =  179 bits (454), Expect = 5e-45
 Identities = 82/127 (64%), Positives = 105/127 (82%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           LLNTN+DG+ KIMYA+T IRG+GRR++NLVCKKA+V+L K AGE + +ELER++ I+ NP
Sbjct: 16  LLNTNVDGKNKIMYAMTAIRGIGRRFSNLVCKKAEVDLRKAAGECSADELERMMGIVANP 75

Query: 199 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 378
             YKIP WFLNRQKD   G+   + ++ L++ +RDDLERLKKIR HRG+RH+WGL+VRGQ
Sbjct: 76  RAYKIPDWFLNRQKDHKTGRFSQLTSSQLDTVMRDDLERLKKIRGHRGLRHYWGLRVRGQ 135

Query: 379 HTKTTSR 399
           HTKTT R
Sbjct: 136 HTKTTGR 142


>P48151|RPS18|RS18_ENTHI (SP: Entamoeba histolytica) 40S ribosomal
           protein S18.
          Length = 155

 Score =  173 bits (438), Expect = 4e-43
 Identities = 78/125 (62%), Positives = 102/125 (81%)
 Frame = +1

Query: 25  NTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNPTN 204
           NTN+DGR K+ YALT I+G GRRYA LVCK+A +++ KRAG +T  E+E+IV I+    N
Sbjct: 18  NTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDILTTQLN 77

Query: 205 YKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQHT 384
           YKIP WFLNRQKD  DGKD  ++AN +E++LR+D+E LKK+R+HRG+RH+WGL+VRGQ+T
Sbjct: 78  YKIPVWFLNRQKDNKDGKDSQLIANAVETRLREDIEALKKMRAHRGLRHYWGLRVRGQNT 137

Query: 385 KTTSR 399
           KTT R
Sbjct: 138 KTTGR 142


>Q9XSU5|RPS18|Q9XSU5 (TrEMBL: Canis familiaris (Dog)) Ribosomal
           protein (Fragment).
          Length = 97

 Score =  142 bits (359), Expect = 6e-34
 Identities = 65/86 (75%), Positives = 76/86 (88%)
 Frame = +1

Query: 142 AGELTQEELERIVTIMQNPTNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLK 321
           AGELT++E+ER++TIMQNP  YKIP WFLNRQKD  DGK   VLAN L++KLR+DLERLK
Sbjct: 1   AGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLK 60

Query: 322 KIRSHRGIRHFWGLKVRGQHTKTTSR 399
           KIR+HRG+RHFWGL+VRGQHTKTT R
Sbjct: 61  KIRAHRGLRHFWGLRVRGQHTKTTGR 86


>Q9Z291||Q9Z291 (TrEMBL: Cricetulus sp) Ribosomal protein S18
           (Fragment).
          Length = 95

 Score =  135 bits (340), Expect = 9e-32
 Identities = 61/84 (72%), Positives = 73/84 (86%)
 Frame = +1

Query: 148 ELTQEELERIVTIMQNPTNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKI 327
           +L ++E+ER++TIMQNP  YKIP WFLNRQKD  DGK   VLAN L++KLR+DLERLKKI
Sbjct: 1   KLNEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKI 60

Query: 328 RSHRGIRHFWGLKVRGQHTKTTSR 399
           R+HRG+RHFWGL+VRGQHTKTT R
Sbjct: 61  RAHRGLRHFWGLRVRGQHTKTTGR 84


>O74021|RPS13P|RS13_PYRHO (SP: Pyrococcus horikoshii) 30S ribosomal
           protein S13P.
          Length = 148

 Score =  115 bits (289), Expect = 7e-26
 Identities = 53/123 (43%), Positives = 86/123 (69%)
 Frame = +1

Query: 31  NIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNPTNYK 210
           ++DG  ++ +ALT I+GVG  +A +VC+ A ++   +AG LT E++++I  I+Q+P ++ 
Sbjct: 14  DLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILQDPVSHG 73

Query: 211 IPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQHTKT 390
           IP W +NR KD   GKD H++   L+  +R+D+ RL++IR++RGIRH  GL VRGQ T++
Sbjct: 74  IPRWAVNRPKDYETGKDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRGQRTRS 133

Query: 391 TSR 399
             R
Sbjct: 134 NFR 136


>Q8TVC1|RPS13P|RS13_METKA (SP: Methanopyrus kandleri) 30S ribosomal
           protein S13P.
          Length = 151

 Score =  113 bits (283), Expect = 4e-25
 Identities = 56/129 (43%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
 Frame = +1

Query: 19  LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 198
           + + ++DG  K+ YALT I+G+G R A  +C++  ++  K+ GEL+ EE+ERI   ++  
Sbjct: 12  IADVDLDGHKKVPYALTGIKGIGIRMAYAICRELGLDEEKKLGELSDEEIERIEEEIKKL 71

Query: 199 TNYK--IPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVR 372
           +  +  IP+W  NRQKD   G+D H++   LE  ++ D++RLKKIR++RGIRH  GL VR
Sbjct: 72  SEGESNIPSWMYNRQKDYETGEDMHLVGAELEMTVKQDIDRLKKIRAYRGIRHELGLPVR 131

Query: 373 GQHTKTTSR 399
           GQ TK++ R
Sbjct: 132 GQRTKSSFR 140


>Q9V1A0|RPS13P|RS13_PYRAB (SP: Pyrococcus abyssi) 30S ribosomal
           protein S13P.
          Length = 148

 Score =  113 bits (283), Expect = 4e-25
 Identities = 52/123 (42%), Positives = 85/123 (69%)
 Frame = +1

Query: 31  NIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNPTNYK 210
           ++DG  ++ +ALT I+GVG  +A +VC+ A ++   +AG LT E++++I  I+Q+P  + 
Sbjct: 14  DLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILQDPVAHG 73

Query: 211 IPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQHTKT 390
           IP W +NR KD   G+D H++   L+  +R+D+ RL++IR++RGIRH  GL VRGQ T++
Sbjct: 74  IPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRGQRTRS 133

Query: 391 TSR 399
             R
Sbjct: 134 NFR 136


>O26141|RPS13P|RS13_METTH (SP: Methanobacterium thermoautotrophicum)
           30S ribosomal protein S13P.
          Length = 149

 Score =  113 bits (283), Expect = 4e-25
 Identities = 54/123 (43%), Positives = 81/123 (65%)
 Frame = +1

Query: 31  NIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNPTNYK 210
           +IDG   +  ALT I+GVG+  +  +   A  +L +R G L+ EE+ER+   ++NP  Y 
Sbjct: 15  DIDGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLEEAIKNPAKYN 74

Query: 211 IPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQHTKT 390
           IP+W +NR+ D   G+D H++ ++LE  LR+DL R++K RS++G RH  GL VRGQ TK+
Sbjct: 75  IPSWMINRRNDYETGEDKHLIESDLEMCLREDLNRMRKTRSYKGRRHELGLPVRGQRTKS 134

Query: 391 TSR 399
           T R
Sbjct: 135 TFR 137


>Q8SRP2|ECU06_1110|Q8SRP2 (TrEMBL: Encephalitozoon cuniculi) 40S
           ribosomal protein S18.
          Length = 153

 Score =  112 bits (281), Expect = 6e-25
 Identities = 57/133 (42%), Positives = 85/133 (63%)
 Frame = +1

Query: 1   MNYYYSLLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIV 180
           + Y   + NTNIDG  +I +ALTKIRG+G R A  +CK+  ++L KRAGE+ ++E++RI 
Sbjct: 10  VQYIVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMKRIS 69

Query: 181 TIMQNPTNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWG 360
             + +P +  IP  ++N Q+D +DG   H++   L++ LR  +ER KK +  R  R   G
Sbjct: 70  DAILDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRLDVG 129

Query: 361 LKVRGQHTKTTSR 399
           LKVRGQ TK+  R
Sbjct: 130 LKVRGQRTKSNGR 142


  Database: sptrembl
    Posted date:  Oct 14, 2003  6:47 PM
  Number of letters in database: 339,323,595
  Number of sequences in database:  1,070,300
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,722,944
Number of Sequences: 1070300
Number of extensions: 2281272
Number of successful extensions: 6915
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6799
length of database: 339,323,595
effective HSP length: 110
effective length of database: 221,590,595
effective search space used: 5318174280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)