BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Candida_albicans_chr7-f2-154337-155746-10
         (1407 letters)

Database: sptrembl 
           1,070,300 sequences; 339,323,595 total letters

Searching.................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

P12611|WHI2|WHI2_YEAST (SP: Saccharomyces cerevisiae (Baker's ye...   168   2e-40
Q9P7D3|SPBP4H10.16C|Q9P7D3 (TrEMBL: Schizosaccharomyces pombe (F...    93   7e-18
Q9P7A5|SPAC20H4.08|Q9P7A5 (TrEMBL: Schizosaccharomyces pombe (Fi...    43   0.008
Q8TBC3||Q8TBC3 (TrEMBL: Homo sapiens (Human)) Hypothetical protein.    37   0.45 
Q8WY93||Q8WY93 (TrEMBL: Homo sapiens (Human)) PP203.                   37   0.45 
Q8BFX3|E330032J19RIK|Q8BFX3 (TrEMBL: Mus musculus (Mouse)) BA275...    37   0.58 
Q8WX16|BA275K8.1|Q8WX16 (TrEMBL: Homo sapiens (Human)) BA275K8.1...    37   0.58 
Q9Y597||Q9Y597 (TrEMBL: Homo sapiens (Human)) NY-REN-45 antigen.       37   0.58 
Q9ES31|SHKBP1|Q9ES31 (TrEMBL: Mus musculus (Mouse)) SETA binding...    37   0.58 
Q8N2I6||Q8N2I6 (TrEMBL: Homo sapiens (Human)) Hypothetical prote...    37   0.58 
O17001|T23B12.6|O17001 (TrEMBL: Caenorhabditis elegans) Hypothet...    34   3.8  
Q9VH62|CG9467|Q9VH62 (TrEMBL: Drosophila melanogaster (Fruit fly...    33   6.5  

>P12611|WHI2|WHI2_YEAST (SP: Saccharomyces cerevisiae (Baker's
           yeast)) Growth regulation protein.
          Length = 486

 Score =  168 bits (425), Expect = 2e-40
 Identities = 112/262 (42%), Positives = 137/262 (52%), Gaps = 22/262 (8%)
 Frame = +1

Query: 259 GGGGDY-NSIIHLNIRGKEFTITRDDLMSLPESILLCLFPNGVFLDVNGNVINNLTEDDI 435
           G   DY +S+IHLNI+   + ITRD LMSLPES+LLCLFP+GVFLD  G VI NLT DD 
Sbjct: 32  GNEEDYGDSLIHLNIQENHYFITRDQLMSLPESLLLCLFPSGVFLDRCGQVITNLTRDDE 91

Query: 436 VY-VNFDPQTFQYIINTFYQAQQDLIQMSTNTTNLTPVTXXXXXX---XXXXXXXXXXXX 603
           VY VNF P  F+YI+  + +A  DL           P +                     
Sbjct: 92  VYIVNFPPDCFEYIMEIYTKAHDDLYNHPVEKFFDRPSSSFVSNAKGFFGLSSNNSISSN 151

Query: 604 XQENILETKPAIIVLREDLDFYVIP----PFERLNSEQ--------MKQLKLGVSIQLLK 747
            +++IL  KPAIIVLREDLD+Y +P     F+  N E         M Q+K+     L  
Sbjct: 152 NEQDILHQKPAIIVLREDLDYYCVPQEEFQFDSTNEENNEDLLRHFMAQVKMAAGSYLTS 211

Query: 748 NKLIFSGL----GYKFXXXXXXXXXXXGNTHDDKS-SKGLGPAEQHLFDMLCSSGFEVKD 912
              IF GL      K             ++ + KS SK LGPAEQHL DMLCSSGF  + 
Sbjct: 212 KTSIFQGLYSSNRLKQQQQQQKIEKGSNSSSNTKSTSKKLGPAEQHLMDMLCSSGFTKET 271

Query: 913 KWGCRSLEPNKCVVSSLLLVRL 978
            WG R+ E  K V+SSL L RL
Sbjct: 272 CWGNRTQETGKTVISSLSLCRL 293



 Score = 73.2 bits (178), Expect = 7e-12
 Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
 Frame = +1

Query: 1171 PDNSTQTKLLLFWRKPARKCWWSHDWVTIEIDA-----PELFKSMKNVNSNRSDSNGKDN 1335
            P  +   KLLLFWRKPARKCWW  + + +E++       E  K ++ +     D   + +
Sbjct: 403  PKPNINAKLLLFWRKPARKCWWGEEDIELEVEVFGSWKDESKKIIELILPTNVDPEAELH 462

Query: 1336 DNKMSVKVHIRRVWTLELSIIGVQ 1407
               + V++HIRRVWTLELS+IGVQ
Sbjct: 463  KIIVPVRLHIRRVWTLELSVIGVQ 486


>Q9P7D3|SPBP4H10.16C|Q9P7D3 (TrEMBL: Schizosaccharomyces pombe
           (Fission yeast)) Putative growth regulation protein, by
           low similarity with yeast whi2.
          Length = 295

 Score = 93.2 bits (230), Expect = 7e-18
 Identities = 71/241 (29%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
 Frame = +1

Query: 283 IIHLNIRGKEFTITRDDLMSLPESILLCLFPNGVFLDVNGNVINNLTEDDIVY--VNFDP 456
           II L  R   F ++RD L+ LPESIL+CLFP G+ LD        LT+  +++   +FDP
Sbjct: 27  IIQLCDRDTVFELSRDQLLGLPESILMCLFPRGLLLDYEIQEC-QLTQRPLIFQTADFDP 85

Query: 457 QTFQYIINTFYQAQQDLIQMSTNTTNLTPVTXXXXXXXXXXXXXXXXXXXQENILETKPA 636
              QYI+N F  A+    + + +   L+P                            K  
Sbjct: 86  SLLQYILNYFQMAEN---RTANDEIALSPPPPS---------------------FPGKCG 121

Query: 637 IIVLREDLDFYVIPPFE-------RLNSEQMKQLKLGVSIQLLKNKLIFSGLGYKFXXXX 795
           II+L+ED++F+++PP          ++   + +LK  V+ +LL+ K IF  L        
Sbjct: 122 IILLKEDIEFFILPPISPTTNIAIEVSPNDLLKLKQRVAQRLLQQKKIFDCLHL------ 175

Query: 796 XXXXXXXGNTHDDKSSKGLGPAEQHLFDMLCSSGFEVKDKWGCRSLEPNKCVVSSLLLVR 975
                        ++S   G AE++L  MLC SGF   D+W  R  EP++  ++S+ L  
Sbjct: 176 -------------ENSTSEGSAEKNLVRMLCYSGFHEDDEWKRRIQEPHRACITSVTLTN 222

Query: 976 L 978
           L
Sbjct: 223 L 223



 Score = 49.7 bits (117), Expect = 9e-05
 Identities = 26/70 (37%), Positives = 33/70 (47%)
 Frame = +1

Query: 1192 KLLLFWRKPARKCWWSHDWVTIEIDAPELFKSMKNVNSNRSDSNGKDNDNKMSVKVHIRR 1371
            KLLLFW+KPARKCWW                          DS+     N +     +RR
Sbjct: 243  KLLLFWQKPARKCWW--------------------------DSSTSITYNGIEFATWVRR 276

Query: 1372 VWTLELSIIG 1401
            VWTLEL+++G
Sbjct: 277  VWTLELAVLG 286


>Q9P7A5|SPAC20H4.08|Q9P7A5 (TrEMBL: Schizosaccharomyces pombe
           (Fission yeast)) Hypothetical protein.
          Length = 270

 Score = 43.1 bits (100), Expect = 0.008
 Identities = 52/236 (22%), Positives = 88/236 (37%), Gaps = 2/236 (0%)
 Frame = +1

Query: 286 IHLNIRGKEFTITRDDLMSLPESILLCLFPNG--VFLDVNGNVINNLTEDDIVYVNFDPQ 459
           IH NIRGK   I R +L  LP ++L  LFPNG  + L   G  +++  +        DP 
Sbjct: 29  IHFNIRGKLIVIDRVELPILPTTVLALLFPNGFHLLLKHEGGDVSSCFKCH----KIDPS 84

Query: 460 TFQYIINTFYQAQQDLIQMSTNTTNLTPVTXXXXXXXXXXXXXXXXXXXQENILETKPAI 639
             ++I++T+       + +   + N  P                       N +     +
Sbjct: 85  ICKWILDTY-------LPLFKKSNNAYPSKIAF------------------NPISNTTLV 119

Query: 640 IVLREDLDFYVIPPFERLNSEQMKQLKLGVSIQLLKNKLIFSGLGYKFXXXXXXXXXXXG 819
           + L E  + Y+   F        ++++  +  Q  KN  +F     K             
Sbjct: 120 LFLTECCNIYL---FSENKKPVDQKIRSDLLEQTFKNNDVFESADKK------------- 163

Query: 820 NTHDDKSSKGLGPAEQHLFDMLCSSGFEVKDKWGCRSLEPNKCVVSSLLLVRLKTN 987
                K  KGL  ++  L D L   GF   DKW  R  EP    + S ++  ++++
Sbjct: 164 -----KIRKGL--SDGPLVDALQHCGFRYNDKWAKRVKEPKLMSLMSYIITTVESS 212


>Q8TBC3||Q8TBC3 (TrEMBL: Homo sapiens (Human)) Hypothetical protein.
          Length = 707

 Score = 37.4 bits (85), Expect = 0.45
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +1

Query: 268 GDYNSIIHLNIRGKEFTITRDDLMSLPESILLCLFPNGVFLDVNGNVINNLTEDDIVYVN 447
           G    +IHLN+ GK F+ +R  L  +P+S    L        ++G +     E   ++++
Sbjct: 15  GPPGEVIHLNVGGKRFSTSRQTLTWIPDSFFSSL--------LSGRISTLKDETGAIFID 66

Query: 448 FDPQTFQYIIN 480
            DP  F  I+N
Sbjct: 67  RDPTVFAPILN 77


>Q8WY93||Q8WY93 (TrEMBL: Homo sapiens (Human)) PP203.
          Length = 707

 Score = 37.4 bits (85), Expect = 0.45
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +1

Query: 268 GDYNSIIHLNIRGKEFTITRDDLMSLPESILLCLFPNGVFLDVNGNVINNLTEDDIVYVN 447
           G    +IHLN+ GK F+ +R  L  +P+S    L        ++G +     E   ++++
Sbjct: 15  GPPGEVIHLNVGGKRFSTSRQTLTWIPDSFFSSL--------LSGRISTLKDETGAIFID 66

Query: 448 FDPQTFQYIIN 480
            DP  F  I+N
Sbjct: 67  RDPTVFAPILN 77


>Q8BFX3|E330032J19RIK|Q8BFX3 (TrEMBL: Mus musculus (Mouse))
           BA275K8.1.
          Length = 815

 Score = 37.0 bits (84), Expect = 0.58
 Identities = 22/81 (27%), Positives = 38/81 (46%)
 Frame = +1

Query: 283 IIHLNIRGKEFTITRDDLMSLPESILLCLFPNGVFLDVNGNVINNLTEDDIVYVNFDPQT 462
           I+ LN+ G  F+ +R  LM +P+S    L        ++G +     E   ++++ DP  
Sbjct: 19  IVQLNVGGTRFSTSRQTLMWIPDSFFSSL--------LSGRISTLRDETGAIFIDRDPAA 70

Query: 463 FQYIINTFYQAQQDLIQMSTN 525
           F  I+N     + DL  +S N
Sbjct: 71  FAPILNFLRTKELDLRGVSIN 91


>Q8WX16|BA275K8.1|Q8WX16 (TrEMBL: Homo sapiens (Human)) BA275K8.1
           (NY-REN-45 antigen).
          Length = 815

 Score = 37.0 bits (84), Expect = 0.58
 Identities = 22/81 (27%), Positives = 38/81 (46%)
 Frame = +1

Query: 283 IIHLNIRGKEFTITRDDLMSLPESILLCLFPNGVFLDVNGNVINNLTEDDIVYVNFDPQT 462
           I+ LN+ G  F+ +R  LM +P+S    L        ++G +     E   ++++ DP  
Sbjct: 19  IVQLNVGGTRFSTSRQTLMWIPDSFFSSL--------LSGRISTLRDETGAIFIDRDPAA 70

Query: 463 FQYIINTFYQAQQDLIQMSTN 525
           F  I+N     + DL  +S N
Sbjct: 71  FAPILNFLRTKELDLRGVSIN 91


>Q9Y597||Q9Y597 (TrEMBL: Homo sapiens (Human)) NY-REN-45 antigen.
          Length = 815

 Score = 37.0 bits (84), Expect = 0.58
 Identities = 22/81 (27%), Positives = 38/81 (46%)
 Frame = +1

Query: 283 IIHLNIRGKEFTITRDDLMSLPESILLCLFPNGVFLDVNGNVINNLTEDDIVYVNFDPQT 462
           I+ LN+ G  F+ +R  LM +P+S    L        ++G +     E   ++++ DP  
Sbjct: 19  IVQLNVGGTRFSTSRQTLMWIPDSFFSSL--------LSGRISTLRDETGAIFIDRDPAA 70

Query: 463 FQYIINTFYQAQQDLIQMSTN 525
           F  I+N     + DL  +S N
Sbjct: 71  FAPILNFLRTKELDLRGVSIN 91


>Q9ES31|SHKBP1|Q9ES31 (TrEMBL: Mus musculus (Mouse)) SETA binding
           protein 1.
          Length = 704

 Score = 37.0 bits (84), Expect = 0.58
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +1

Query: 268 GDYNSIIHLNIRGKEFTITRDDLMSLPESILLCLFPNGVFLDVNGNVINNLTEDDIVYVN 447
           G    +IHLN+ GK F+ +R  L  +P+S    L        ++G +     E   ++++
Sbjct: 15  GAPGEVIHLNVGGKRFSTSRQTLTWIPDSFFSSL--------LSGRISTLKDETGAIFID 66

Query: 448 FDPQTFQYIIN 480
            DP  F  I+N
Sbjct: 67  RDPTVFAPILN 77


>Q8N2I6||Q8N2I6 (TrEMBL: Homo sapiens (Human)) Hypothetical protein
           FLJ90576.
          Length = 305

 Score = 37.0 bits (84), Expect = 0.58
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +1

Query: 268 GDYNSIIHLNIRGKEFTITRDDLMSLPESILLCLFPNGVFLDVNGNVINNLTEDDIVYVN 447
           G    +IHLN+ GK F+ +R  L  +P+S    L        ++G +     E   ++++
Sbjct: 15  GPPGEVIHLNVGGKRFSTSRQTLTWIPDSFFSSL--------LSGRISTLKGETGAIFID 66

Query: 448 FDPQTFQYIIN 480
            DP  F  I+N
Sbjct: 67  RDPTVFAPILN 77


>O17001|T23B12.6|O17001 (TrEMBL: Caenorhabditis elegans)
           Hypothetical protein.
          Length = 670

 Score = 34.3 bits (77), Expect = 3.8
 Identities = 22/88 (25%), Positives = 42/88 (47%)
 Frame = +1

Query: 265 GGDYNSIIHLNIRGKEFTITRDDLMSLPESILLCLFPNGVFLDVNGNVINNLTEDDIVYV 444
           G DY  I++LN+ G+ F  + + L  +P+S    L        ++G + +       +++
Sbjct: 16  GSDY--IVNLNVGGRIFATSCNTLTWIPDSFFTSL--------LSGRMNSVKDPSGAIFI 65

Query: 445 NFDPQTFQYIINTFYQAQQDLIQMSTNT 528
           + DP  F+ I+N     Q DL  +  +T
Sbjct: 66  DRDPDLFRVILNYLRTKQVDLCGIKVDT 93


>Q9VH62|CG9467|Q9VH62 (TrEMBL: Drosophila melanogaster (Fruit fly))
           CG9467 protein.
          Length = 730

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 15/68 (22%), Positives = 36/68 (52%)
 Frame = +1

Query: 277 NSIIHLNIRGKEFTITRDDLMSLPESILLCLFPNGVFLDVNGNVINNLTEDDIVYVNFDP 456
           + +++LN+ G+ F+ +R  L  +P++    L        ++G + +   E + ++++ DP
Sbjct: 10  SDLVNLNVGGQRFSTSRQTLTWIPDTFFTAL--------LSGRISSLRDEHNAIFIDRDP 61

Query: 457 QTFQYIIN 480
             F  I+N
Sbjct: 62  TLFSIILN 69


  Database: sptrembl
    Posted date:  Oct 14, 2003  6:47 PM
  Number of letters in database: 339,323,595
  Number of sequences in database:  1,070,300
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 293,936,374
Number of Sequences: 1070300
Number of extensions: 5077301
Number of successful extensions: 22590
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21807
length of database: 339,323,595
effective HSP length: 125
effective length of database: 205,536,095
effective search space used: 70498880585
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)