BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Candida_albicans_chr7-f2-38507-39679-13 (1170 letters) Database: sptrembl 1,070,300 sequences; 339,323,595 total letters Searching.................................................done Score E Sequences producing significant alignments: (bits) Value Q08913|YOR390W|Q08913 (TrEMBL: Saccharomyces cerevisiae (Baker's... 148 1e-34 Q08991|YPL279C|Q08991 (TrEMBL: Saccharomyces cerevisiae (Baker's... 147 2e-34 Q9UTS8|SPAC977.11|Q9UTS8 (TrEMBL: Schizosaccharomyces pombe (Fis... 118 2e-25 Q8RYE2|AT2G41705|Q8RYE2 (TrEMBL: Arabidopsis thaliana (Mouse-ear... 54 5e-06 Q9HW19|CRCB|CRCB_PSEAE (SP: Pseudomonas aeruginosa) Protein crcB... 50 7e-05 Q8CS29|SE1451|Q8CS29 (TrEMBL: Staphylococcus epidermidis) Conser... 45 0.001 Q8DPG7|CRCB|Q8DPG7 (TrEMBL: Streptococcus pneumoniae (strain ATC... 45 0.002 Q89Z03|CRCB|CRCB_BACTN (SP: Bacteroides thetaiotaomicron) Protei... 43 0.008 Q97QC5|SP1294|Q97QC5 (TrEMBL: Streptococcus pneumoniae) CrcB pro... 42 0.014 Q8Y5I1|CRCB1|CRB1_LISMO (SP: Listeria monocytogenes) Protein crc... 41 0.024 Q8NW04|CRCB|CRCB_STAAW (SP: Staphylococcus aureus (strain MW2)) ... 41 0.032 Q99T86|CRCB|CRCB_STAAM (SP: Staphylococcus aureus (strain N315))... 41 0.032 Q929T7|CRCB1|CRB1_LISIN (SP: Listeria innocua) Protein crcB homo... 40 0.041 Q82U09|NE1704|Q82U09 (TrEMBL: Nitrosomonas europaea) CRCB protein. 40 0.054 Q8DPG6|CRCB|Q8DPG6 (TrEMBL: Streptococcus pneumoniae (strain ATC... 39 0.092 Q97QC4|SP1295|Q97QC4 (TrEMBL: Streptococcus pneumoniae) CrcB pro... 39 0.092 Q925U7||Q925U7 (TrEMBL: Mus musculus (Mouse)) Ileal sodium-depen... 39 0.16 P70172|SLC10A2|P70172 (TrEMBL: Mus musculus (Mouse)) Ileal NA+-d... 39 0.16 P46491|CRCB|CRCB_HAEIN (SP: Haemophilus influenzae) Protein crcB... 36 0.78 Q8TJ54|CRCB1|CRB1_METAC (SP: Methanosarcina acetivorans) Protein... 36 0.78 Q9FC37|CRCB2|CRB2_STRCO (SP: Streptomyces coelicolor) Protein cr... 36 1.0 Q9CKI7|CRCB|CRCB_PASMU (SP: Pasteurella multocida) Protein crcB ... 36 1.0 Q815R5|BC5068|Q815R5 (TrEMBL: Bacillus cereus (strain ATCC 14579... 35 1.3 Q97IQ3|CRCB1|CRB1_CLOAB (SP: Clostridium acetobutylicum) Protein... 35 1.3 P43129|FRE|FRE_PHOLU (SP: Photorhabdus luminescens (Xenorhabdus ... 35 1.3 Q8XGH9|CRCB|CRCB_SALTY (SP: Salmonella typhi) Protein crcB homolog. 35 1.7 Q8TW26|CRCB|CRCB_METKA (SP: Methanopyrus kandleri) Protein crcB ... 35 1.7 Q8RYS0|OSJNBA0026J14.14|Q8RYS0 (TrEMBL: Oryza sativa (japonica c... 34 3.0 Q81XC0|BA5320|Q81XC0 (TrEMBL: Bacillus anthracis (strain Ames)) ... 34 3.0 Q62633|SLC10A2|NTCI_RAT (SP: Rattus norvegicus (Rat)) Ileal sodi... 34 3.0 >Q08913|YOR390W|Q08913 (TrEMBL: Saccharomyces cerevisiae (Baker's yeast)) Chromosome XV reading frame ORF YOR390W. Length = 375 Score = 148 bits (374), Expect = 1e-34 Identities = 105/370 (28%), Positives = 173/370 (46%), Gaps = 47/370 (12%) Frame = +1 Query: 199 KTQKYYPVILNIVHGAIWGVLVRKGLMLLTTYSGSFLSG--VIWANFAACVVMGLAIDGE 372 K Y V I G R+ + L+TY+ +F++ V+W+N ++C++MG+ Sbjct: 11 KLSHYIHVFCTFTTFCILGTETRQAITALSTYTPAFVTAPTVLWSNCSSCMLMGIMQSLN 70 Query: 373 VF-WIRLLEEKDYPNKGAIPVYTGLTTGFCGTVSSFSSVILEAFNKAAD-TDIGVRHH-- 540 + W+ KD+ ++ G+TTG+CG +SSFSS++LE F + + T+ + +H Sbjct: 71 AYTWM-----KDHQ-----VLFLGVTTGYCGALSSFSSMLLEMFEHSTNLTNGNIANHTK 120 Query: 541 YPNGAYGIMQFLAVILAQFGLS----IMGFHMGKQFLAVVDN------YLPLVT------ 672 PN AYGIM+FL+V+L +S I G +GK+ + + Y P Sbjct: 121 LPNRAYGIMEFLSVLLVHLMVSMGSLIFGRQLGKEVIVAYGSSSFSKPYTPPSDTVKENA 180 Query: 673 ------------------------KRIYKVLELTSMILGVVLVVITCILIGVKKQGSWRS 780 K+ + +++ + L L+++ +L + S Sbjct: 181 GDVDTQEMEKNILEFKFKTPAPFFKKFFDIVDKLAYALAFPLIILFVVLCAYYENYSRGK 240 Query: 781 WTFSMLFAPFGALLRYYLSKFLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKG 960 WT LF F LRY+L++ N FPLGTF AN RGK Sbjct: 241 WTLPCLFGIFAGFLRYWLAEMFNKTNKKFPLGTFLANVFATLLIGIFTMVQRGKKHFSTD 300 Query: 961 HIVTNTI-ALHVLEGLDDGFCGGLTTVSTFVVELFGLKTLFSYRYGTISILVCFAGVVLI 1137 + N++ + H++ L GFCG L+T+STF+ E + L + Y T+SI + + +V+ Sbjct: 301 VPIVNSLNSCHIVSALISGFCGTLSTISTFINEGYKLSFINMLIYYTVSIAISYCLLVIT 360 Query: 1138 LGSYNWSVGL 1167 LGSY W+ GL Sbjct: 361 LGSYAWTRGL 370 >Q08991|YPL279C|Q08991 (TrEMBL: Saccharomyces cerevisiae (Baker's yeast)) Chromosome XVI reading frame ORF YPL279C. Length = 375 Score = 147 bits (372), Expect = 2e-34 Identities = 106/370 (28%), Positives = 173/370 (46%), Gaps = 47/370 (12%) Frame = +1 Query: 199 KTQKYYPVILNIVHGAIWGVLVRKGLMLLTTYSGSFLSG--VIWANFAACVVMGLAIDGE 372 K Y V I G R+ + L+TY+ +F++ V+W+N ++C++MG+ Sbjct: 11 KLSHYIHVFCTFTTFCILGTETRQAITALSTYTPAFVTAPTVLWSNCSSCMLMGIMQSLN 70 Query: 373 VF-WIRLLEEKDYPNKGAIPVYTGLTTGFCGTVSSFSSVILEAFNKAAD-TDIGVRHH-- 540 + W+ KD+ ++ G+TTG+CG +SSFSS++LE F + + T+ + +H Sbjct: 71 AYTWM-----KDHQ-----VLFLGVTTGYCGALSSFSSMLLEMFEHSTNLTNGNIANHTK 120 Query: 541 YPNGAYGIMQFLAVILAQFGLS----IMGFHMGKQFLAVVDN------YLPLVT------ 672 PN AYGIM+FL+V+L +S I G +GK+ + + Y P Sbjct: 121 LPNRAYGIMEFLSVLLVHLMVSMGSLIFGRQLGKEVIVAYGSSSFSKPYTPPSDTVKENA 180 Query: 673 ------------------------KRIYKVLELTSMILGVVLVVITCILIGVKKQGSWRS 780 K+ + V++ + L L+++ +L + S Sbjct: 181 GDVDTQEMEKNILEFKFKTPAPFFKKFFDVVDKLAYALAFPLIILFVVLCAYYENYSRGK 240 Query: 781 WTFSMLFAPFGALLRYYLSKFLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKG 960 WT LF F LRY+L++ N FPLGTF AN RGK Sbjct: 241 WTLPCLFGIFAGFLRYWLAEMFNKTNKKFPLGTFLANVFATLLIGIFTMVQRGKKHFSTD 300 Query: 961 HIVTNTI-ALHVLEGLDDGFCGGLTTVSTFVVELFGLKTLFSYRYGTISILVCFAGVVLI 1137 + N++ + H++ L GFCG L+T+STF+ E + L + Y T+SI + + +V+ Sbjct: 301 IPIVNSLNSCHIVSALISGFCGTLSTISTFINEGYKLSFINMLIYYTVSIGISYCLLVIT 360 Query: 1138 LGSYNWSVGL 1167 LGSY W+ GL Sbjct: 361 LGSYAWTRGL 370 >Q9UTS8|SPAC977.11|Q9UTS8 (TrEMBL: Schizosaccharomyces pombe (Fission yeast)) Hypothetical protein. Length = 311 Score = 118 bits (295), Expect = 2e-25 Identities = 89/330 (26%), Positives = 152/330 (46%), Gaps = 9/330 (2%) Frame = +1 Query: 202 TQKYYPVILNIVHGAIWGVLVRKGLMLLTTYSGSFLSGVIWANFAACVVMGLAIDGEVFW 381 TQ Y+ ++ ++ G L R GL L TY G+ SG++W F CV+MG VF+ Sbjct: 4 TQSYFCIM------SMLGTLARLGLTALNTYPGAPFSGLLWVQFVGCVIMGFCQTESVFF 57 Query: 382 IRLLEEKDYPNKGAIPVYTGLTTGFCGTVSSFSSVILEAFNKAADTDIGVRHHYPNGAYG 561 R P A +TTGFCG++++FSS +L+ F A+ D R Y Sbjct: 58 PR-------PKHNA-TFLLAITTGFCGSLTTFSSWMLQMFTGMANLDPFERR---GRGYS 106 Query: 562 IMQFLAVILAQFGLSIMGFHMGKQFLAVVDNYLPLVTKRIYKVLELTSMILGVVLVVIT- 738 + ++ + +++ GKQ + + + T +++ V+L++++ Sbjct: 107 FLSVVSDFMVTMCIAMSSLIWGKQIGKTTGQWRIGKVAFAWPIPAHTHIVVRVLLLLLSI 166 Query: 739 CILIGVKKQGSW------RSWTFSMLFAPFGALLRYYLSKFLNNKVSNFPLGTFTANXXX 900 C +G ++ R FS++F+PF AL R YL++FLN+ P GT AN Sbjct: 167 CFFVGAAFYTAYTTNVTHRGIGFSLIFSPFAALTRLYLARFLNSPQYFIPYGTLCANVFA 226 Query: 901 XXXXXXXXXXXRGKLPGGKGHIVTN--TIALHVLEGLDDGFCGGLTTVSTFVVELFGLKT 1074 + +T+ ++ V+ G+ +GFC L+T+STF EL + Sbjct: 227 TLLLSIMYMIPQ----------ITHCTPVSRSVMYGIQNGFCAVLSTLSTFSNELHTMPI 276 Query: 1075 LFSYRYGTISILVCFAGVVLILGSYNWSVG 1164 +Y Y IS+ + F+ V++ G+ W G Sbjct: 277 KRAYIYCIISVAISFSICVIVDGATAWGHG 306 >Q8RYE2|AT2G41705|Q8RYE2 (TrEMBL: Arabidopsis thaliana (Mouse-ear cress)) Expressed protein (Hypothetical protein). Length = 461 Score = 53.5 bits (127), Expect = 5e-06 Identities = 87/387 (22%), Positives = 146/387 (37%), Gaps = 29/387 (7%) Frame = +1 Query: 91 RTIQSDLVDIEAESISSALPEGFNYEKKTTATRFLDKTQKYYPVILNIVHGAIWGVLVRK 270 +T+ D+ + S PE N K+ R L K+ +Y ++++ I+G + R Sbjct: 102 KTLPEDITASPLPTKSLLSPEINNSGKEEE--RVLPKSLEYISCLIHLAVFGIFGAITRY 159 Query: 271 GLMLL-------TTYSGSFLSGVIWANFAACVVMGLAIDGEVFWIRLLEEKDYPNKGAIP 429 L L T GS L + +N +MG W ++ + D Sbjct: 160 LLQKLFGPTGARVTSDGSILYLDLPSNMVGSFLMG--------WFGVVFKADIARVSEF- 210 Query: 430 VYTGLTTGFCGTVSSFSSVILEAFNKAADTDIGVRHHYPNGAYGIMQFLAVILAQFGLSI 609 V GL+TG+ G++++FS + + +AD Y ++ FL + I Sbjct: 211 VAIGLSTGYLGSLTTFSGWNQKMLDLSADGQ---------WVYAVLGFLLGLFLTSYSII 261 Query: 610 MGFHMGKQFLAVV-------DNYLPLVTKRIYK-VLELTSMILGVVLVVITCILIGVK-- 759 +G K F ++ D + L ++ LT M+L +V ++ ++ VK Sbjct: 262 LGVETAKGFKWLLHRRASSEDKFHCLKVNTFQSHIVSLTLMLLLLVALLTASSILLVKEF 321 Query: 760 -KQGSWRSWTFSMLFAPFGALLRYYLSKF----LNNKVSNF---PLGTFTANXXXXXXXX 915 K S F L A G LR++L++ L N P GT AN Sbjct: 322 DKGTSEAQLWFGCLVAAPGVWLRWFLARLNGRGLGKDSQNLRWVPFGTLIANVVAACVMA 381 Query: 916 XXXXXXRGKLPGGKGHIVTNTIALHVLEGLDDGFCGGLTTVSTFVVELFGLK----TLFS 1083 + V V + G G L+TVSTF+ E ++ + Sbjct: 382 ALATLKKS---------VNTRTCNTVASSIQFGLLGCLSTVSTFMAEFNAMRESDYPWRA 432 Query: 1084 YRYGTISILVCFAGVVLILGSYNWSVG 1164 Y Y + +I+V FA +I W +G Sbjct: 433 YAYASFTIVVSFAIGTIIYSVPVWVIG 459 >Q9HW19|CRCB|CRCB_PSEAE (SP: Pseudomonas aeruginosa) Protein crcB homolog. Length = 127 Score = 49.7 bits (117), Expect = 7e-05 Identities = 43/138 (31%), Positives = 60/138 (43%), Gaps = 7/138 (5%) Frame = +1 Query: 772 WRSWTFSMLFAPFGALLRYYLSKFLNNKVSNFPLGTFTAN---XXXXXXXXXXXXXXRGK 942 W+S L A GALLR++L LN+ + + P GT AN G Sbjct: 2 WKSILAIALGAALGALLRWFLGLKLNSLLPSIPPGTLLANLVGGYVIGAAIAYFAQAPGI 61 Query: 943 LPGGKGHIVTNTIALHVLEGLDDGFCGGLTTVSTFVVELFGL--KTLFSYRYGTISILVC 1116 P + I+T GFCGGLTT STF E+ L + + G I+ V Sbjct: 62 APEWRLLIIT-------------GFCGGLTTFSTFSAEVVSLLQEGRLGWAAGAIATHVS 108 Query: 1117 FAGVVLILG--SYNWSVG 1164 + ++ +LG S NW +G Sbjct: 109 GSLLMTLLGLFSMNWMLG 126 >Q8CS29|SE1451|Q8CS29 (TrEMBL: Staphylococcus epidermidis) Conserved hypothetical protein. Length = 121 Score = 45.4 bits (106), Expect = 0.001 Identities = 39/116 (33%), Positives = 50/116 (43%), Gaps = 10/116 (8%) Frame = +1 Query: 811 GALLRYYLSKFLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKGHIVTNTIALH 990 GAL+R+ LS N+ S PLGTF AN L G G + + H Sbjct: 13 GALIRFCLSML--NEGSTIPLGTFVANLLGAF------------LMGSIGALSLSLFKTH 58 Query: 991 --VLEGLDDGFCGGLTTVSTFVVEL--------FGLKTLFSYRYGTISILVCFAGV 1128 + +GL G G LTT STF EL F L T++ + IL C+ GV Sbjct: 59 PNIKKGLTTGLLGALTTFSTFQFELVTLFNQHHFILFTIYGVTSYILGILSCYLGV 114 >Q8DPG7|CRCB|Q8DPG7 (TrEMBL: Streptococcus pneumoniae (strain ATCC BAA-255 / R6)) CrcB protein. Length = 109 Score = 44.7 bits (104), Expect = 0.002 Identities = 38/115 (33%), Positives = 50/115 (43%), Gaps = 6/115 (5%) Frame = +1 Query: 808 FGALLRYYLSKFLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKGHIVTNTIAL 987 FGAL+RY+ S++ N+ S PLGT AN G + + Sbjct: 12 FGALVRYFFSRY--NQASKLPLGTLIANLLGCFLI---------------GVFYNHVESK 54 Query: 988 HVLEGLDDGFCGGLTTVSTFVVELFGL----KTLFSYRYGTI--SILVCFAGVVL 1134 V L GFCGGLTT ST EL L K +SY T ++ F G++L Sbjct: 55 EVYAILATGFCGGLTTFSTLNDELQRLLSDKKVFYSYLILTYLGGLVAIFLGILL 109 >Q89Z03|CRCB|CRCB_BACTN (SP: Bacteroides thetaiotaomicron) Protein crcB homolog. Length = 124 Score = 42.7 bits (99), Expect = 0.008 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%) Frame = +1 Query: 811 GALLRYYLSKFLNNKVS-NFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKGHIVTNTIAL 987 G +LRY +S+++ N ++ +FPLGT N +G+++ + + Sbjct: 15 GGVLRYLISRYVQNFLTPSFPLGTLLVNVLGCFAIGLFYGLFE------RGNLMNPNLRM 68 Query: 988 HVLEGLDDGFCGGLTTVSTFVVELFGLKTLFSYRYGTISI-LVCFAGVVLILGSYN 1152 L GFCGG TT STF+ E F L ++ Y ++ + L F G +++ Y+ Sbjct: 69 F----LTVGFCGGFTTFSTFMNENFQLIKDDNFFYLSLYVGLSLFVGFIMLYLGYS 120 >Q97QC5|SP1294|Q97QC5 (TrEMBL: Streptococcus pneumoniae) CrcB protein. Length = 109 Score = 42.0 bits (97), Expect = 0.014 Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 6/114 (5%) Frame = +1 Query: 811 GALLRYYLSKFLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKGHIVTNTIALH 990 GAL+RY+ S++ N+ S PLGT AN G + + Sbjct: 13 GALVRYFFSRY--NQASKLPLGTLIANLLGCFLI---------------GVFYNHVESKE 55 Query: 991 VLEGLDDGFCGGLTTVSTFVVELFGL----KTLFSYRYGTI--SILVCFAGVVL 1134 V L GFCGGLTT ST EL L K +SY T ++ F G++L Sbjct: 56 VYAILATGFCGGLTTFSTLNDELQRLLSDKKVFYSYLTLTYIGGLVAIFLGILL 109 >Q8Y5I1|CRCB1|CRB1_LISMO (SP: Listeria monocytogenes) Protein crcB homolog 1. Length = 118 Score = 41.2 bits (95), Expect = 0.024 Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 1/115 (0%) Frame = +1 Query: 802 APFGALLRYYLSKFLNNK-VSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKGHIVTNT 978 A GA+LRY +S + +K +NFP TF N G +V++ Sbjct: 12 AALGAMLRYGISVLVKSKWKTNFPSATFFINITGSFLL---------------GFLVSSA 56 Query: 979 IALHVLEGLDDGFCGGLTTVSTFVVELFGLKTLFSYRYGTISILVCFAGVVLILG 1143 + L GF GG TT STF VE LK +YR +L + G + G Sbjct: 57 LGPVWQLFLGTGFMGGYTTFSTFKVESMELKWKTNYR-----VLFSYLGFTYVFG 106 >Q8NW04|CRCB|CRCB_STAAW (SP: Staphylococcus aureus (strain MW2)) Protein crcB homolog. Length = 147 Score = 40.8 bits (94), Expect = 0.032 Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 13/131 (9%) Frame = +1 Query: 781 WTFSMLFAPFGALLRYYLSKFLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKG 960 + + + GALLRY +S FLN FP+GT AN G Sbjct: 29 YVYIFIGGALGALLRYLIS-FLNTD-GGFPIGTLIANLTGAFVM---------------G 71 Query: 961 HIVTNTIALH-----VLEGLDDGFCGGLTTVSTFVVEL--------FGLKTLFSYRYGTI 1101 + TIA + + + GF G LTT STF +EL F L++ Sbjct: 72 LLTALTIAFFSNHPTLKKAITTGFLGALTTFSTFQLELIHMFDHQQFITLLLYAVTSYVF 131 Query: 1102 SILVCFAGVVL 1134 IL+C+ G+ L Sbjct: 132 GILLCYVGIKL 142 >Q99T86|CRCB|CRCB_STAAM (SP: Staphylococcus aureus (strain N315)) Protein crcB homolog. Length = 147 Score = 40.8 bits (94), Expect = 0.032 Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 13/131 (9%) Frame = +1 Query: 781 WTFSMLFAPFGALLRYYLSKFLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKG 960 + + + GALLRY +S FLN FP+GT AN G Sbjct: 29 YVYIFIGGALGALLRYLIS-FLNTD-GGFPIGTLIANLTGAFVM---------------G 71 Query: 961 HIVTNTIALH-----VLEGLDDGFCGGLTTVSTFVVEL--------FGLKTLFSYRYGTI 1101 + TIA + + + GF G LTT STF +EL F L++ Sbjct: 72 LLTALTIAFFSNHPTLKKAITTGFLGALTTFSTFQLELIHMFDHQQFITLLLYAVTSYVF 131 Query: 1102 SILVCFAGVVL 1134 IL+C+ G+ L Sbjct: 132 GILLCYVGIKL 142 >Q929T7|CRCB1|CRB1_LISIN (SP: Listeria innocua) Protein crcB homolog 1. Length = 118 Score = 40.4 bits (93), Expect = 0.041 Identities = 38/120 (31%), Positives = 51/120 (42%), Gaps = 9/120 (7%) Frame = +1 Query: 802 APFGALLRYYLSKFLNNK-VSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKGHIVTNT 978 A GA+LRY +S F+ +K ++FP TF N G +V+ Sbjct: 12 ASLGAMLRYGISIFVKSKWKTDFPYATFFINITGSFLL---------------GFLVSTA 56 Query: 979 IALHVLEGLDDGFCGGLTTVSTFVVELFGLK------TLFSYRYGT--ISILVCFAGVVL 1134 + L GF GG TT STF VE LK LFSY T ++ F G++L Sbjct: 57 LGPMWQLFLGTGFMGGYTTFSTFKVESMELKWKANFQVLFSYVGLTYLCGLIAAFIGIML 116 >Q82U09|NE1704|Q82U09 (TrEMBL: Nitrosomonas europaea) CRCB protein. Length = 127 Score = 40.0 bits (92), Expect = 0.054 Identities = 34/122 (27%), Positives = 49/122 (40%) Frame = +1 Query: 772 WRSWTFSMLFAPFGALLRYYLSKFLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPG 951 W+ L + G LLR+ L LNN + P GT AN Sbjct: 2 WKPILAIALGSTLGGLLRWGLGLKLNNLFPDVPPGTLVANLIAGYVVGVAIAFF------ 55 Query: 952 GKGHIVTNTIALHVLEGLDDGFCGGLTTVSTFVVELFGLKTLFSYRYGTISILVCFAGVV 1131 H+ + +L + GFCGGL+T STF E+ L Y + +I V AG + Sbjct: 56 --AHMPNLSPEWRLL--VITGFCGGLSTFSTFSAEIVSLLQRGLYAWAMSAIAVHVAGSL 111 Query: 1132 LI 1137 ++ Sbjct: 112 IM 113 >Q8DPG6|CRCB|Q8DPG6 (TrEMBL: Streptococcus pneumoniae (strain ATCC BAA-255 / R6)) CrcB protein. Length = 124 Score = 39.3 bits (90), Expect = 0.092 Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 3/123 (2%) Frame = +1 Query: 796 LFAPFGALLRYYLSKFLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKGHIVTN 975 L A G L+RY +S +L +FP GT N KG++V Sbjct: 13 LAAMLGGLVRYLVSTWLPAS-PDFPWGTLFVNYLGIFCLIFLV----------KGYLVYK 61 Query: 976 TIALHVLEGLDDGFCGGLTTVSTFVVELFGLKTLFSYRYGTISILVCFAGVVLI---LGS 1146 + ++ L GFCGGLTT S+ +++ L Y + +L+ G +L+ LG Sbjct: 62 GTSKGLILALGTGFCGGLTTFSSLMLDTVKLLDTGRYFSLVLYLLLSIGGGLLLAYFLGR 121 Query: 1147 YNW 1155 W Sbjct: 122 KKW 124 Score = 34.3 bits (77), Expect = 3.0 Identities = 31/107 (28%), Positives = 50/107 (46%) Frame = +1 Query: 199 KTQKYYPVILNIVHGAIWGVLVRKGLMLLTTYSGSFLSGVIWANFAACVVMGLAIDGEVF 378 K +++YP L I A+ G LVR + S F G ++ N+ + + G + Sbjct: 2 KKEQFYP--LGIFLAAMLGGLVRYLVSTWLPASPDFPWGTLFVNYLGIFCLIFLVKGYLV 59 Query: 379 WIRLLEEKDYPNKGAIPVYTGLTTGFCGTVSSFSSVILEAFNKAADT 519 + +KG I L TGFCG +++FSS++L+ K DT Sbjct: 60 Y-------KGTSKGLI---LALGTGFCGGLTTFSSLMLDTV-KLLDT 95 >Q97QC4|SP1295|Q97QC4 (TrEMBL: Streptococcus pneumoniae) CrcB protein. Length = 124 Score = 39.3 bits (90), Expect = 0.092 Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 3/123 (2%) Frame = +1 Query: 796 LFAPFGALLRYYLSKFLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKGHIVTN 975 L A G L+RY +S +L +FP GT N KG++V Sbjct: 13 LAAMLGGLVRYLVSTWLPAS-PDFPWGTLFVNYLGIFCLIYLV----------KGYLVYK 61 Query: 976 TIALHVLEGLDDGFCGGLTTVSTFVVELFGLKTLFSYRYGTISILVCFAGVVLI---LGS 1146 + ++ L GFCGGLTT S+ +++ L Y + +L+ G +L+ LG Sbjct: 62 GTSKGLILALGTGFCGGLTTFSSLMLDTVKLLDTGRYLSLILYLLLSIGGGLLLAYYLGR 121 Query: 1147 YNW 1155 W Sbjct: 122 KKW 124 Score = 34.7 bits (78), Expect = 2.3 Identities = 37/145 (25%), Positives = 67/145 (46%) Frame = +1 Query: 199 KTQKYYPVILNIVHGAIWGVLVRKGLMLLTTYSGSFLSGVIWANFAACVVMGLAIDGEVF 378 K +++YP L I A+ G LVR + S F G ++ N+ + + G + Sbjct: 2 KKEQFYP--LGIFLAAMLGGLVRYLVSTWLPASPDFPWGTLFVNYLGIFCLIYLVKGYLV 59 Query: 379 WIRLLEEKDYPNKGAIPVYTGLTTGFCGTVSSFSSVILEAFNKAADTDIGVRHHYPNGAY 558 + +KG I L TGFCG +++FSS++L+ K DT G Y Sbjct: 60 Y-------KGTSKGLI---LALGTGFCGGLTTFSSLMLDTV-KLLDT----------GRY 98 Query: 559 GIMQFLAVILAQFGLSIMGFHMGKQ 633 + L ++L+ G ++ +++G++ Sbjct: 99 -LSLILYLLLSIGGGLLLAYYLGRK 122 >Q925U7||Q925U7 (TrEMBL: Mus musculus (Mouse)) Ileal sodium-dependent bile acid transporter. Length = 348 Score = 38.5 bits (88), Expect = 0.16 Identities = 44/209 (21%), Positives = 84/209 (40%), Gaps = 9/209 (4%) Frame = +1 Query: 241 GAIWGVLVRKGLMLLTTYSGSFLSGVIWANFAACVVMGLAIDGE-----VFWIRLLEEKD 405 G G L + G+M LT + S SG++ ++MG G +WI Sbjct: 67 GIFVGFLCQFGIMPLTGFILSVASGILPVQAVVVLIMGCCPGGTGSNILAYWI------- 119 Query: 406 YPNKGAIPVYTGLTTGFCGTVSSFSSVILEAFNKAADTDIGVRHHYPNGAYGIMQFLAVI 585 G + + +TT C T+ + + L F + + +G + + Sbjct: 120 ---DGDMDLSVSMTT--CSTLLALGMMPLCLF-------VYTKMWVDSGT------IVIP 161 Query: 586 LAQFGLSIMGFHMGKQFLAVVDNYLPLVTKRIYKVLELTSMILGVVLVVITCILIGVKKQ 765 G+S++ + F V++ P K I K+ +T GV+L+V+ ++ G+ Q Sbjct: 162 YDSIGISLVALVIPVSFGMFVNHKWPQKAKIILKIGSIT----GVILIVLIAVIGGILYQ 217 Query: 766 GSW----RSWTFSMLFAPFGALLRYYLSK 840 +W + W +F G L ++L++ Sbjct: 218 SAWIIEPKLWIIGTIFPIAGYSLGFFLAR 246 >P70172|SLC10A2|P70172 (TrEMBL: Mus musculus (Mouse)) Ileal NA+-dependent bile acid transporter (ISBT). Length = 348 Score = 38.5 bits (88), Expect = 0.16 Identities = 44/209 (21%), Positives = 84/209 (40%), Gaps = 9/209 (4%) Frame = +1 Query: 241 GAIWGVLVRKGLMLLTTYSGSFLSGVIWANFAACVVMGLAIDGE-----VFWIRLLEEKD 405 G G L + G+M LT + S SG++ ++MG G +WI Sbjct: 67 GIFVGFLCQFGIMPLTGFILSVASGILPVQAVVVLIMGCCPGGTGSNILAYWI------- 119 Query: 406 YPNKGAIPVYTGLTTGFCGTVSSFSSVILEAFNKAADTDIGVRHHYPNGAYGIMQFLAVI 585 G + + +TT C T+ + + L F + + +G + + Sbjct: 120 ---DGDMDLSVSMTT--CSTLLALGMMPLCLF-------VYTKMWVDSGT------IVIP 161 Query: 586 LAQFGLSIMGFHMGKQFLAVVDNYLPLVTKRIYKVLELTSMILGVVLVVITCILIGVKKQ 765 G+S++ + F V++ P K I K+ +T GV+L+V+ ++ G+ Q Sbjct: 162 YDSIGISLVALVIPVSFGMFVNHKWPQKAKIILKIGSIT----GVILIVLIAVIGGILYQ 217 Query: 766 GSW----RSWTFSMLFAPFGALLRYYLSK 840 +W + W +F G L ++L++ Sbjct: 218 SAWIIEPKLWIIGTIFPIAGYSLGFFLAR 246 >P46491|CRCB|CRCB_HAEIN (SP: Haemophilus influenzae) Protein crcB homolog. Length = 160 Score = 36.2 bits (82), Expect = 0.78 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 4/97 (4%) Frame = +1 Query: 223 ILNIVHGAIWGVLVRKGL-MLLTTYSGSFLSGVIWANFAACVVMGLAIDGEVFWIRLLEE 399 +L I +GAI G +R + +L SF G + AN C+++G+ + +FW Sbjct: 4 LLFISYGAILGASLRWAIGLLFNPLFSSFAFGTLIANLFGCLIIGVLLG--LFW------ 55 Query: 400 KDYPNKGAIPVYTGLTTGFCGTV---SSFSSVILEAF 501 +P A L TGF G++ SSFSS ++E F Sbjct: 56 -QFPQISA-EWRLFLITGFLGSLTTFSSFSSEVVELF 90 >Q8TJ54|CRCB1|CRB1_METAC (SP: Methanosarcina acetivorans) Protein crcB homolog 1. Length = 131 Score = 36.2 bits (82), Expect = 0.78 Identities = 30/86 (34%), Positives = 35/86 (40%) Frame = +1 Query: 811 GALLRYYLSKFLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKGHIVTNTIALH 990 GA+LRY LS ++ N NFPLGT N L +G T L Sbjct: 14 GAVLRYSLSGWVQNSFVNFPLGTLVVNIVGSFFLGLVMY-----LSEYQGLFSEETRIL- 67 Query: 991 VLEGLDDGFCGGLTTVSTFVVELFGL 1068 L G G TT+STF E F L Sbjct: 68 ----LTIGLLGAFTTLSTFSYESFRL 89 >Q9FC37|CRCB2|CRB2_STRCO (SP: Streptomyces coelicolor) Protein crcB homolog 2. Length = 124 Score = 35.8 bits (81), Expect = 1.0 Identities = 31/128 (24%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Frame = +1 Query: 778 SWTFSMLFAPFGALLRYYLSKFLNNKVSN-FPLGTFTANXXXXXXXXXXXXXXRGKLPGG 954 +W + GA LRY + + ++ + FP GTFT N G Sbjct: 2 NWLLVVAGGMIGAPLRYLTDRAVQSRHDSVFPWGTFTVNVIGSVVLGLLTGAALAGAVGS 61 Query: 955 KGHIVTNTIALHVLEGLDDGFCGGLTTVSTFVVELFGLKTLFSYRYGTISI--------L 1110 ++ T G CG LTT STF E L + + +++ + Sbjct: 62 DLRLLLGT-----------GLCGALTTYSTFSYETLRLTETGARLHAAVNVGGSVAAGLV 110 Query: 1111 VCFAGVVL 1134 FAGV L Sbjct: 111 AAFAGVTL 118 >Q9CKI7|CRCB|CRCB_PASMU (SP: Pasteurella multocida) Protein crcB homolog. Length = 128 Score = 35.8 bits (81), Expect = 1.0 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 1/92 (1%) Frame = +1 Query: 223 ILNIVHGAIWGVLVRKGL-MLLTTYSGSFLSGVIWANFAACVVMGLAIDGEVFWIRLLEE 399 I+ I GA G L R GL +LL +F G + AN+ C+++G+ + FW Sbjct: 8 IIFISSGAALGALSRWGLGLLLNPLFSAFSLGTLVANYLGCLIIGVFL--AFFW------ 59 Query: 400 KDYPNKGAIPVYTGLTTGFCGTVSSFSSVILE 495 YP A TGF G++++FS+ E Sbjct: 60 -QYPQCSA-EWRLFFVTGFLGSLTTFSTFSAE 89 >Q815R5|BC5068|Q815R5 (TrEMBL: Bacillus cereus (strain ATCC 14579 / DSM 31)) CrcB family protein. Length = 118 Score = 35.4 bits (80), Expect = 1.3 Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 7/119 (5%) Frame = +1 Query: 808 FGALLRYYLSK-FLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKGHIVTNTIA 984 FGA+ R+ +S F + FPL TF N G+I+ N + Sbjct: 13 FGAITRFAISNWFKKRNKTQFPLATFLINITGAFLL---------------GYIIGNGVT 57 Query: 985 LHVLEGLDDGFCGGLTTVSTFVVELF------GLKTLFSYRYGTISILVCFAGVVLILG 1143 L GF G TT STF +E + T Y T I + FA + + LG Sbjct: 58 TGWQLLLGTGFMGAFTTFSTFKLEAVQLLNRKNISTFLLYLSATYIIGILFAFLGMKLG 116 >Q97IQ3|CRCB1|CRB1_CLOAB (SP: Clostridium acetobutylicum) Protein crcB homolog 1. Length = 117 Score = 35.4 bits (80), Expect = 1.3 Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 2/115 (1%) Frame = +1 Query: 811 GALLRYYLSKFLNNKV-SNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKGHIVTNTIAL 987 G+++RY + ++ + S FP GTF N GK Sbjct: 13 GSIVRYKIGDIISKRTKSKFPWGTFIINITGAFLLGIITKSGAGK--------------- 57 Query: 988 HVLEGLDDGFCGGLTTVSTFVVELFGLKTLFSYRYGTISILVCFAGVVL-ILGSY 1149 ++ L DGF G TT STF+ E F LF + +++ + +++ ILG Y Sbjct: 58 NLSMILADGFLGAYTTFSTFMYEGF---NLFENKKKLNALIYILSSIIIGILGFY 109 >P43129|FRE|FRE_PHOLU (SP: Photorhabdus luminescens (Xenorhabdus luminescens)) NAD(P)H-flavin reductase (EC 1.6.8.-) (NAD(P)H:flavin oxidoreductase). Length = 232 Score = 35.4 bits (80), Expect = 1.3 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = +1 Query: 382 IRLLEEKDYPNKGAIPVYTGLTTGFCGTVSSFSSVILEAFNKAADTDI 525 +RLL E+ YPN IPV G+CG + +LE F A+ DI Sbjct: 151 LRLLTER-YPNLKVIPVVEQSDNGWCGRTGTVLKAVLEDFGSLANYDI 197 >Q8XGH9|CRCB|CRCB_SALTY (SP: Salmonella typhi) Protein crcB homolog. Length = 127 Score = 35.0 bits (79), Expect = 1.7 Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 4/109 (3%) Frame = +1 Query: 811 GALLRYYLSKFLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKGHIVTNTIALH 990 G++ R+ LS N P+GT TAN G G G N + H Sbjct: 15 GSVARWMLSMRFNPLHQAIPIGTLTANLL-------------GAFIIGMGFAWFNRMT-H 60 Query: 991 VLEG----LDDGFCGGLTTVSTFVVELFGLKTLFSYRYGTISILVCFAG 1125 + + GFCGGLTT STF E+ L + + +++L+ G Sbjct: 61 IDPMWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLNVLINLLG 109 >Q8TW26|CRCB|CRCB_METKA (SP: Methanopyrus kandleri) Protein crcB homolog. Length = 131 Score = 35.0 bits (79), Expect = 1.7 Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 3/114 (2%) Frame = +1 Query: 811 GALLRYYLSKFLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKGHIVTNTIALH 990 GA+ RY LS + +V FP+GT N L + AL Sbjct: 19 GAVCRYLLSGLVP-QVRGFPMGTVLVNVLGSFVLGFLTWSTMLGL-----RLSPEVRALA 72 Query: 991 VLEGLDDGFCGGLTTVSTF---VVELFGLKTLFSYRYGTISILVCFAGVVLILG 1143 + GFCGGLTT+ST VEL + S Y T ++++ G+ +LG Sbjct: 73 TV-----GFCGGLTTLSTMAYETVELLKASPVLSILYLTANVVL---GIAAVLG 118 >Q8RYS0|OSJNBA0026J14.14|Q8RYS0 (TrEMBL: Oryza sativa (japonica cultivar-group)) Nodulin-like protein. Length = 318 Score = 34.3 bits (77), Expect = 3.0 Identities = 24/101 (23%), Positives = 42/101 (41%) Frame = +1 Query: 556 YGIMQFLAVILAQFGLSIMGFHMGKQFLAVVDNYLPLVTKRIYKVLELTSMILGVVLVVI 735 +GI + V+ + G+ I+ F+ G + ++ N L ++ + T Sbjct: 97 HGIAKVFGVLFSIVGVIILAFYQGPELKSL--NLQHLSSRNVVP----TGSTAYTTKAWT 150 Query: 736 TCILIGVKKQGSWRSWTFSMLFAPFGALLRYYLSKFLNNKV 858 + I + V SW WT + P G +L Y SK LN + Sbjct: 151 SGIFLTVLSTTSWALWTVLQIVLPQGLMLEVYPSKLLNTTI 191 >Q81XC0|BA5320|Q81XC0 (TrEMBL: Bacillus anthracis (strain Ames)) CrcB protein. Length = 118 Score = 34.3 bits (77), Expect = 3.0 Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 7/119 (5%) Frame = +1 Query: 808 FGALLRYYLSK-FLNNKVSNFPLGTFTANXXXXXXXXXXXXXXRGKLPGGKGHIVTNTIA 984 FGA+ R+ +S F ++FP+ TF N G+I+ N + Sbjct: 13 FGAITRFTISNWFKKRNKTSFPIATFLINITGAFLL---------------GYIIGNGVT 57 Query: 985 LHVLEGLDDGFCGGLTTVSTFVVELFGL------KTLFSYRYGTISILVCFAGVVLILG 1143 L GF G TT STF +E L T Y T + + FA + + LG Sbjct: 58 TGWQLLLGTGFMGAFTTFSTFKLESVQLLNRKNFSTFLLYLSATYIVGILFAFLGMKLG 116 >Q62633|SLC10A2|NTCI_RAT (SP: Rattus norvegicus (Rat)) Ileal sodium/bile acid cotransporter (Ileal Na(+)/bile acid cotransporter) (Na+ dependent ileal bile acid transporter) (Ileal sodium-dependent bile acid transporter) (ISBT) (Sodium/taurocholate cotransporting polypeptide, ileal). Length = 348 Score = 34.3 bits (77), Expect = 3.0 Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 9/209 (4%) Frame = +1 Query: 241 GAIWGVLVRKGLMLLTTYSGSFLSGVIWANFAACVVMGLAIDGE-----VFWIRLLEEKD 405 G G L + G+M LT + S SG++ ++MG G +WI Sbjct: 67 GIFVGFLCQFGIMPLTGFILSVASGILPVQAVVVLIMGCCPGGTGSNILAYWI------- 119 Query: 406 YPNKGAIPVYTGLTTGFCGTVSSFSSVILEAFNKAADTDIGVRHHYPNGAYGIMQFLAVI 585 G + + +TT C T+ + + L F I + +G + + Sbjct: 120 ---DGDMDLSVSMTT--CSTLLALGMMPLCLF-------IYTKMWVDSGT------IVIP 161 Query: 586 LAQFGLSIMGFHMGKQFLAVVDNYLPLVTKRIYKVLELTSMILGVVLVVITCILIGVKKQ 765 G+S++ + V++ P K I K+ I G +L+V+ ++ G+ Q Sbjct: 162 YDSIGISLVALVIPVSIGMFVNHKWPQKAKIILKI----GSIAGAILIVLIAVVGGILYQ 217 Query: 766 GSW----RSWTFSMLFAPFGALLRYYLSK 840 +W + W +F G L ++L++ Sbjct: 218 SAWIIEPKLWIIGTIFPIAGYSLGFFLAR 246 Database: sptrembl Posted date: Oct 14, 2003 6:47 PM Number of letters in database: 339,323,595 Number of sequences in database: 1,070,300 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 379,917,013 Number of Sequences: 1070300 Number of extensions: 8679837 Number of successful extensions: 33922 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 33071 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 33891 length of database: 339,323,595 effective HSP length: 123 effective length of database: 207,676,695 effective search space used: 55242000870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)