BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Candida_albicans_chr7-f2-480377-482491-31
         (2112 letters)

Database: sptrembl 
           1,070,300 sequences; 339,323,595 total letters

Searching.................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

P34761|WHI3|WHI3_YEAST (SP: Saccharomyces cerevisiae (Baker's ye...   149   1e-34
Q07655|WHI4|Q07655 (TrEMBL: Saccharomyces cerevisiae (Baker's ye...   138   3e-31
O74452|SCW1|SCW1_SCHPO (SP: Schizosaccharomyces pombe (Fission y...    98   3e-19
O59784|SPCC320.07C|O59784 (TrEMBL: Schizosaccharomyces pombe (Fi...    91   7e-17
Q8L5G3|PRP3|Q8L5G3 (TrEMBL: Cicer arietinum (Chickpea) (Garbanzo...    68   4e-10
Q9ASW4|AT3G21215|Q9ASW4 (TrEMBL: Arabidopsis thaliana (Mouse-ear...    68   5e-10
Q9LU37||Q9LU37 (TrEMBL: Arabidopsis thaliana (Mouse-ear cress)) ...    53   2e-05
Q19018|F46A9.6|Q19018 (TrEMBL: Caenorhabditis elegans) MEC-8 pro...    49   2e-04
Q22039|MEC-8|Q22039 (TrEMBL: Caenorhabditis elegans) Mec-8 protein.    49   2e-04
Q8GYT5|AT3G13700/MMM17_13|Q8GYT5 (TrEMBL: Arabidopsis thaliana (...    49   2e-04
Q9LIC8||Q9LIC8 (TrEMBL: Arabidopsis thaliana (Mouse-ear cress)) ...    47   0.001
Q84WY3|AT2G42245/T24P15.1|Q84WY3 (TrEMBL: Arabidopsis thaliana (...    45   0.003
Q84WY1|AT2G42245/T24P15.1|Q84WY1 (TrEMBL: Arabidopsis thaliana (...    42   0.030
Q8H0P8|RBP1|Q8H0P8 (TrEMBL: Medicago truncatula (Barrel medic)) ...    41   0.066
Q8GYL1|AT1G76940/F22K20_23|Q8GYL1 (TrEMBL: Arabidopsis thaliana ...    41   0.066
Q8CII5|TIA1|Q8CII5 (TrEMBL: Mus musculus (Mouse)) Similar to TIA...    39   0.19 
Q96B58||Q96B58 (TrEMBL: Homo sapiens (Human)) Similar to cytotox...    39   0.19 
P52912|TIA1|TIA1_MOUSE (SP: Mus musculus (Mouse)) Nucleolysin TI...    39   0.19 
P31483|TIA1|TIA1_HUMAN (SP: Homo sapiens (Human)) Nucleolysin TI...    39   0.19 
Q7ZVM6||Q7ZVM6 (TrEMBL: Brachydanio rerio (Zebrafish) (Danio rer...    39   0.25 
Q800W4||Q800W4 (TrEMBL: Gallus gallus (Chicken)) TIA-1.                39   0.33 
Q80ZW7||Q80ZW7 (TrEMBL: Mus musculus (Mouse)) Similar to cytotox...    38   0.43 
Q921W2|TIAL1|Q921W2 (TrEMBL: Mus musculus (Mouse)) TIA1 cytotoxi...    38   0.56 
Q01085|TIAL1|TIAR_HUMAN (SP: Homo sapiens (Human)) Nucleolysin T...    38   0.56 
Q8BJV3||Q8BJV3 (TrEMBL: Mus musculus (Mouse)) Splicing factor.         37   0.73 
Q8C1H9|SFRS1|Q8C1H9 (TrEMBL: Mus musculus (Mouse)) Splicing factor.    37   0.73 
Q07955|SFRS1|SFR1_HUMAN (SP: Homo sapiens (Human)) Splicing fact...    37   0.73 
Q7ZX99||Q7ZX99 (TrEMBL: Xenopus laevis (African clawed frog)) Si...    37   1.2  
Q90WN1|TIAR|Q90WN1 (TrEMBL: Xenopus laevis (African clawed frog)...    37   1.2  
Q10193|SRP1|SRP1_SCHPO (SP: Schizosaccharomyces pombe (Fission y...    36   2.1  

>P34761|WHI3|WHI3_YEAST (SP: Saccharomyces cerevisiae (Baker's yeast))
            WHI3 protein.
          Length = 661

 Score =  149 bits (376), Expect = 1e-34
 Identities = 85/144 (59%), Positives = 92/144 (63%)
 Frame = +1

Query: 1573 DLSLLARVXXXXXXXXXXXXCNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXX 1752
            DLSLLAR+            CNTLYVGNLP DATE ELR LFS Q+GFRRLSFR KN   
Sbjct: 517  DLSLLARIPPPANPADQNPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKN--- 573

Query: 1753 XXXXXXXXXXXXXXXXXXXXPMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLS 1932
                                PMCFVEF+DV+ ATRALAELYGR LPR +  + KGGIRLS
Sbjct: 574  -----------TTSNGHSHGPMCFVEFDDVSFATRALAELYGRQLPR-STVSSKGGIRLS 621

Query: 1933 FSKNPLGVRGPGNSRRTSTNPAPN 2004
            FSKNPLGVRGP + R  S NP PN
Sbjct: 622  FSKNPLGVRGPNSRRGGSGNPNPN 645


>Q07655|WHI4|Q07655 (TrEMBL: Saccharomyces cerevisiae (Baker's yeast))
            Chromosome IV reading frame ORF YDL224C.
          Length = 649

 Score =  138 bits (347), Expect = 3e-31
 Identities = 85/148 (57%), Positives = 90/148 (60%), Gaps = 1/148 (0%)
 Frame = +1

Query: 1546 GSTSSKDVPDLSLLARVXXXXXXXXXXXXCNTLYVGNLPPDATESELRTLFSPQKGFRRL 1725
            GST+     DLSLLA+V            CNTLYVGNLPPDATE ELR LFS Q+GFRRL
Sbjct: 504  GSTTISQA-DLSLLAKVPPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSNQQGFRRL 562

Query: 1726 SFRTKNQXXXXXXXXXXXXXXXXXXXXXXPMCFVEFEDVAHATRALAELYGRALPRPNGG 1905
            SFR K                        P+CFVEFEDV+ ATRALAELYG  LP P   
Sbjct: 563  SFRNK-----------MNSHGHGNGHGHGPICFVEFEDVSFATRALAELYGSQLPHPRPS 611

Query: 1906 -NGKGGIRLSFSKNPLGVRGPGNSRRTS 1986
             N KGGIRLSFSKNPLGVRG  NSR  S
Sbjct: 612  LNNKGGIRLSFSKNPLGVRG-SNSRSKS 638


>O74452|SCW1|SCW1_SCHPO (SP: Schizosaccharomyces pombe (Fission
            yeast)) Cell wall integrity protein scw1 (Strong cell
            wall protein 1).
          Length = 561

 Score = 98.2 bits (243), Expect = 3e-19
 Identities = 56/124 (45%), Positives = 66/124 (53%)
 Frame = +1

Query: 1633 CNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXX 1812
            CNT+YVGNLPP  +E EL+ LFS Q G++RL FRTK                        
Sbjct: 425  CNTIYVGNLPPSTSEEELKVLFSTQVGYKRLCFRTKGN---------------------G 463

Query: 1813 PMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPLGVRGPGNSRRTSTN 1992
            PMCFVEFE++ +A  AL  L G  L      + KGGIRLSFSKNPLGVR   +S      
Sbjct: 464  PMCFVEFENIPYAMEALKNLQGVCL----SSSIKGGIRLSFSKNPLGVRSSSSSHNNHNG 519

Query: 1993 PAPN 2004
               N
Sbjct: 520  NVRN 523


>O59784|SPCC320.07C|O59784 (TrEMBL: Schizosaccharomyces pombe (Fission
            yeast)) Putative rna-binding protein.
          Length = 761

 Score = 90.5 bits (223), Expect = 7e-17
 Identities = 52/119 (43%), Positives = 65/119 (54%)
 Frame = +1

Query: 1633 CNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXX 1812
            CNT+YVGNL     E +LR  FS +KG+RRL F+ K                        
Sbjct: 601  CNTIYVGNLSNPDQEKKLRLAFSKEKGYRRLCFKIKGN---------------------S 639

Query: 1813 PMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPLGVRGPGNSRRTST 1989
            PMCFVEFE+V HA +A+ ++ G AL        KGGIRLS+SKNPLGVR   N   T++
Sbjct: 640  PMCFVEFEEVCHAAKAMEKMQGAAL----DDKIKGGIRLSYSKNPLGVRSTENLSTTAS 694


>Q8L5G3|PRP3|Q8L5G3 (TrEMBL: Cicer arietinum (Chickpea) (Garbanzo))
            Proline rich protein 3 (Fragment).
          Length = 284

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 39/113 (34%), Positives = 55/113 (48%)
 Frame = +1

Query: 1633 CNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXX 1812
            CNTL++GNL  +  E E+R LFS Q GF+++    + +                      
Sbjct: 179  CNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHT-------------------- 218

Query: 1813 PMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPLGVRGPGN 1971
             +CF+EFEDV  AT     L G  +P     +G  G+R+ +SKNP G R  GN
Sbjct: 219  -VCFIEFEDVNSATNVHHNLQGAVIP----SSGSVGMRIQYSKNPFGKRKDGN 266


>Q9ASW4|AT3G21215|Q9ASW4 (TrEMBL: Arabidopsis thaliana (Mouse-ear
            cress)) At3g21211 (At3g21211/At3g21211) (Hypothetical
            protein).
          Length = 339

 Score = 67.8 bits (164), Expect = 5e-10
 Identities = 40/124 (32%), Positives = 58/124 (46%)
 Frame = +1

Query: 1633 CNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXX 1812
            CNTL++GNL  +  E ELR+L S Q GF+++    + +                      
Sbjct: 232  CNTLFIGNLGENINEEELRSLLSAQPGFKQMKILRQERHT-------------------- 271

Query: 1813 PMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPLGVRGPGNSRRTSTN 1992
             +CF+EFEDV  AT     L G  +P     +G  G+R+ +SKNP G R  G       +
Sbjct: 272  -VCFIEFEDVNSATNVHHNLQGAVIP----SSGSIGMRIQYSKNPYGKRKEGGGYSFFPS 326

Query: 1993 PAPN 2004
            P+ N
Sbjct: 327  PSAN 330


>Q9LU37||Q9LU37 (TrEMBL: Arabidopsis thaliana (Mouse-ear cress))
            Genomic DNA, chromosome 3, P1 clone: MXL8.
          Length = 317

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 31/101 (30%), Positives = 47/101 (46%)
 Frame = +1

Query: 1633 CNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXX 1812
            CNTL++GNL  +  E ELR+L S Q GF+++    + +                      
Sbjct: 232  CNTLFIGNLGENINEEELRSLLSAQPGFKQMKILRQERHT-------------------- 271

Query: 1813 PMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSF 1935
             +CF+EFEDV  AT     L G  +P     +G  G+R+ +
Sbjct: 272  -VCFIEFEDVNSATNVHHNLQGAVIP----SSGSIGMRIQY 307


>Q19018|F46A9.6|Q19018 (TrEMBL: Caenorhabditis elegans) MEC-8 protein.
          Length = 312

 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 30/106 (28%), Positives = 47/106 (44%)
 Frame = +1

Query: 1633 CNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXX 1812
            C+TL+V NL  +  E  LR +F    GF RL    KN                       
Sbjct: 227  CSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKN---------------------GS 265

Query: 1813 PMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPL 1950
             + FVE+ D+  AT+A+  L G  +      N +GG+R+ +++N +
Sbjct: 266  CVAFVEYSDLQKATQAMISLQGFQIT----ANDRGGLRIEYARNKM 307


>Q22039|MEC-8|Q22039 (TrEMBL: Caenorhabditis elegans) Mec-8 protein.
          Length = 312

 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 30/106 (28%), Positives = 47/106 (44%)
 Frame = +1

Query: 1633 CNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXX 1812
            C+TL+V NL  +  E  LR +F    GF RL    KN                       
Sbjct: 227  CSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKN---------------------GS 265

Query: 1813 PMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPL 1950
             + FVE+ D+  AT+A+  L G  +      N +GG+R+ +++N +
Sbjct: 266  CVAFVEYSDLQKATQAMISLQGFQIT----ANDRGGLRIEYARNKM 307


>Q8GYT5|AT3G13700/MMM17_13|Q8GYT5 (TrEMBL: Arabidopsis thaliana
            (Mouse-ear cress)) Hypothetical protein.
          Length = 287

 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 28/106 (26%), Positives = 48/106 (45%)
 Frame = +1

Query: 1633 CNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXX 1812
            C+TL++ NL P+ TE EL+ L S   GF  L  R +                        
Sbjct: 204  CSTLFIANLGPNCTEDELKQLLSRYPGFHILKIRARG---------------------GM 242

Query: 1813 PMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPL 1950
            P+ F +FE++  AT A+  L G  L      + +GG+ + ++++ +
Sbjct: 243  PVAFADFEEIEQATDAMNHLQGNLL----SSSDRGGMHIEYARSKM 284


>Q9LIC8||Q9LIC8 (TrEMBL: Arabidopsis thaliana (Mouse-ear cress))
            Emb|CAA64867.1.
          Length = 271

 Score = 47.0 bits (110), Expect = 0.001
 Identities = 28/101 (27%), Positives = 44/101 (43%)
 Frame = +1

Query: 1633 CNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXX 1812
            C+TL++ NL P+ TE EL+ L S   GF  L  R +                        
Sbjct: 179  CSTLFIANLGPNCTEDELKQLLSRYPGFHILKIRARG---------------------GM 217

Query: 1813 PMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSF 1935
            P+ F +FE++  AT A+  L G  L      + +GG+ + +
Sbjct: 218  PVAFADFEEIEQATDAMNHLQGNLL----SSSDRGGMHIDY 254


>Q84WY3|AT2G42245/T24P15.1|Q84WY3 (TrEMBL: Arabidopsis thaliana
            (Mouse-ear cress)) Hypothetical protein.
          Length = 277

 Score = 45.4 bits (106), Expect = 0.003
 Identities = 30/109 (27%), Positives = 52/109 (47%)
 Frame = +1

Query: 1633 CNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXX 1812
            C TL++ N+ P+ TE+EL  +FS  +GF +L  +                          
Sbjct: 189  CPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQ---------------------GTYGT 227

Query: 1813 PMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPLGVR 1959
            P+ FV+F+DV+ ++ AL  L G  L     G     +RL ++++ +G+R
Sbjct: 228  PVAFVDFQDVSCSSEALHTLQGTVLYSSLTGE---VLRLQYARSRMGMR 273


>Q84WY1|AT2G42245/T24P15.1|Q84WY1 (TrEMBL: Arabidopsis thaliana
            (Mouse-ear cress)) Hypothetical protein.
          Length = 287

 Score = 42.0 bits (97), Expect = 0.030
 Identities = 25/85 (29%), Positives = 40/85 (47%)
 Frame = +1

Query: 1633 CNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXX 1812
            C TL++ N+ P+ TE+EL  +FS  +GF +L  +                          
Sbjct: 189  CPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQ---------------------GTYGT 227

Query: 1813 PMCFVEFEDVAHATRALAELYGRAL 1887
            P+ FV+F+DV+ ++ AL  L G  L
Sbjct: 228  PVAFVDFQDVSCSSEALHTLQGTVL 252


>Q8H0P8|RBP1|Q8H0P8 (TrEMBL: Medicago truncatula (Barrel medic))
            RNA-binding protein.
          Length = 261

 Score = 40.8 bits (94), Expect = 0.066
 Identities = 33/113 (29%), Positives = 47/113 (41%)
 Frame = +1

Query: 1639 TLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXXPM 1818
            TLY+  LP D T  E+  +F P  G+R +   +K                         +
Sbjct: 152  TLYIEGLPSDCTRREVAHIFRPFVGYREVRLVSKEAKHRGDPLI---------------L 196

Query: 1819 CFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPLGVRGPGNSR 1977
            CFV+F + A A  AL+ L G  +   N  +    +RL FS+ P G R  G  R
Sbjct: 197  CFVDFANPACAATALSALQGYKVDEINPESSH--LRLQFSRYP-GPRSGGGPR 246


>Q8GYL1|AT1G76940/F22K20_23|Q8GYL1 (TrEMBL: Arabidopsis thaliana
            (Mouse-ear cress)) Hypothetical protein.
          Length = 156

 Score = 40.8 bits (94), Expect = 0.066
 Identities = 35/115 (30%), Positives = 50/115 (43%)
 Frame = +1

Query: 1636 NTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXXP 1815
            NTLYV  LP + +  E+  +F P  G+R +   TK+                        
Sbjct: 59   NTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIV-------------- 104

Query: 1816 MCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPLGVRGPGNSRR 1980
            +CFV+F + A A  AL+ L G  +   N  + K  +RL FS+ P G R     RR
Sbjct: 105  LCFVDFTNPACAATALSALQGYRMDE-NESDSK-FLRLQFSRKP-GSRPGQRGRR 156


>Q8CII5|TIA1|Q8CII5 (TrEMBL: Mus musculus (Mouse)) Similar to TIA1
            cytotoxic granule-associated RNA binding protein.
          Length = 285

 Score = 39.3 bits (90), Expect = 0.19
 Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1639 TLYVGNLPPDATESELRTLFS---PQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXX 1809
            TLYVGNL  D TE+ +  LFS   P K  + +     N                      
Sbjct: 8    TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGND--------------------- 46

Query: 1810 XPMCFVEFEDVAHATRALAELYGRAL 1887
             P CFVEF +  HA  ALA + GR +
Sbjct: 47   -PYCFVEFHEHRHAAAALAAMNGRKI 71


>Q96B58||Q96B58 (TrEMBL: Homo sapiens (Human)) Similar to cytotoxic
            granule-associated RNA-binding protein 1.
          Length = 214

 Score = 39.3 bits (90), Expect = 0.19
 Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1639 TLYVGNLPPDATESELRTLFS---PQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXX 1809
            TLYVGNL  D TE+ +  LFS   P K  + +     N                      
Sbjct: 8    TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGND--------------------- 46

Query: 1810 XPMCFVEFEDVAHATRALAELYGRAL 1887
             P CFVEF +  HA  ALA + GR +
Sbjct: 47   -PYCFVEFHEHRHAAAALAAMNGRKI 71


>P52912|TIA1|TIA1_MOUSE (SP: Mus musculus (Mouse)) Nucleolysin TIA-1
            (RNA-binding protein TIA-1).
          Length = 386

 Score = 39.3 bits (90), Expect = 0.19
 Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1639 TLYVGNLPPDATESELRTLFS---PQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXX 1809
            TLYVGNL  D TE+ +  LFS   P K  + +     N                      
Sbjct: 8    TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGND--------------------- 46

Query: 1810 XPMCFVEFEDVAHATRALAELYGRAL 1887
             P CFVEF +  HA  ALA + GR +
Sbjct: 47   -PYCFVEFHEHRHAAAALAAMNGRKI 71


>P31483|TIA1|TIA1_HUMAN (SP: Homo sapiens (Human)) Nucleolysin TIA-1
            (RNA-binding protein TIA-1) (P40-TIA-1) [Contains:
            P15-TIA-1].
          Length = 386

 Score = 39.3 bits (90), Expect = 0.19
 Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1639 TLYVGNLPPDATESELRTLFS---PQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXX 1809
            TLYVGNL  D TE+ +  LFS   P K  + +     N                      
Sbjct: 8    TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGND--------------------- 46

Query: 1810 XPMCFVEFEDVAHATRALAELYGRAL 1887
             P CFVEF +  HA  ALA + GR +
Sbjct: 47   -PYCFVEFHEHRHAAAALAAMNGRKI 71


>Q7ZVM6||Q7ZVM6 (TrEMBL: Brachydanio rerio (Zebrafish) (Danio rerio))
            Similar to TIA1 cytotoxic granule-associated RNA binding
            protein.
          Length = 342

 Score = 38.9 bits (89), Expect = 0.25
 Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1639 TLYVGNLPPDATESELRTLFS---PQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXX 1809
            TLYVGNL  D TE+ +  +FS   P K  + +   T N                      
Sbjct: 10   TLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGND--------------------- 48

Query: 1810 XPMCFVEFEDVAHATRALAELYGRAL 1887
             P CFVEF +  HA  ALA + GR +
Sbjct: 49   -PYCFVEFYENRHAAAALAAMNGRKI 73


>Q800W4||Q800W4 (TrEMBL: Gallus gallus (Chicken)) TIA-1.
          Length = 372

 Score = 38.5 bits (88), Expect = 0.33
 Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1639 TLYVGNLPPDATESELRTLFS---PQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXX 1809
            TLYVGNL  D TE+ +  LFS   P K  + +     N                      
Sbjct: 8    TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGND--------------------- 46

Query: 1810 XPMCFVEFEDVAHATRALAELYGRAL 1887
             P CFVEF +  HA  ALA + GR +
Sbjct: 47   -PYCFVEFYEHRHAASALAAMNGRKI 71


>Q80ZW7||Q80ZW7 (TrEMBL: Mus musculus (Mouse)) Similar to cytotoxic
            granule-associated RNA binding protein 1.
          Length = 377

 Score = 38.1 bits (87), Expect = 0.43
 Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
 Frame = +1

Query: 1639 TLYVGNLPPDATESELRTLFS---PQKGFRRL-SFRTKNQXXXXXXXXXXXXXXXXXXXX 1806
            TLYVGNL  D TE+ +  LFS   P K  + +   RT                       
Sbjct: 8    TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGND------------------- 48

Query: 1807 XXPMCFVEFEDVAHATRALAELYGRAL 1887
              P CFVEF +  HA  ALA + GR +
Sbjct: 49   --PYCFVEFHEHRHAAAALAAMNGRKI 73


>Q921W2|TIAL1|Q921W2 (TrEMBL: Mus musculus (Mouse)) TIA1 cytotoxic
            granule-associated RNA-binding protein-like 1.
          Length = 375

 Score = 37.7 bits (86), Expect = 0.56
 Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1639 TLYVGNLPPDATESELRTLFS---PQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXX 1809
            TLYVGNL  D TE  +  LFS   P K  + ++  T N                      
Sbjct: 10   TLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSND--------------------- 48

Query: 1810 XPMCFVEFEDVAHATRALAELYGRAL 1887
             P CFVEF +   A  ALA + GR +
Sbjct: 49   -PYCFVEFYEHRDAAAALAAMNGRKI 73


>Q01085|TIAL1|TIAR_HUMAN (SP: Homo sapiens (Human)) Nucleolysin TIAR
            (TIA-1 related protein).
          Length = 375

 Score = 37.7 bits (86), Expect = 0.56
 Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1639 TLYVGNLPPDATESELRTLFS---PQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXX 1809
            TLYVGNL  D TE  +  LFS   P K  + ++  T N                      
Sbjct: 10   TLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSND--------------------- 48

Query: 1810 XPMCFVEFEDVAHATRALAELYGRAL 1887
             P CFVEF +   A  ALA + GR +
Sbjct: 49   -PYCFVEFYEHRDAAAALAAMNGRKI 73


>Q8BJV3||Q8BJV3 (TrEMBL: Mus musculus (Mouse)) Splicing factor.
          Length = 201

 Score = 37.4 bits (85), Expect = 0.73
 Identities = 33/124 (26%), Positives = 43/124 (34%), Gaps = 12/124 (9%)
 Frame = +1

Query: 1642 LYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXXPMC 1821
            +YVGNLPPD    ++  +F      R +  + +                        P  
Sbjct: 18   IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRR--------------------GGPPFA 57

Query: 1822 FVEFEDVAHATRALAELYGR------------ALPRPNGGNGKGGIRLSFSKNPLGVRGP 1965
            FVEFED   A  A   +YGR              PR   G G+GG        P G  GP
Sbjct: 58   FVEFEDPRDAEDA---VYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGP 114

Query: 1966 GNSR 1977
             + R
Sbjct: 115  PSRR 118


>Q8C1H9|SFRS1|Q8C1H9 (TrEMBL: Mus musculus (Mouse)) Splicing factor.
          Length = 248

 Score = 37.4 bits (85), Expect = 0.73
 Identities = 33/124 (26%), Positives = 43/124 (34%), Gaps = 12/124 (9%)
 Frame = +1

Query: 1642 LYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXXPMC 1821
            +YVGNLPPD    ++  +F      R +  + +                        P  
Sbjct: 18   IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRR--------------------GGPPFA 57

Query: 1822 FVEFEDVAHATRALAELYGR------------ALPRPNGGNGKGGIRLSFSKNPLGVRGP 1965
            FVEFED   A  A   +YGR              PR   G G+GG        P G  GP
Sbjct: 58   FVEFEDPRDAEDA---VYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGP 114

Query: 1966 GNSR 1977
             + R
Sbjct: 115  PSRR 118


>Q07955|SFRS1|SFR1_HUMAN (SP: Homo sapiens (Human)) Splicing factor,
            arginine/serine-rich 1 (pre-mRNA splicing factor SF2, P33
            subunit) (Alternative splicing factor ASF-1).
          Length = 247

 Score = 37.4 bits (85), Expect = 0.73
 Identities = 33/124 (26%), Positives = 43/124 (34%), Gaps = 12/124 (9%)
 Frame = +1

Query: 1642 LYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXXXPMC 1821
            +YVGNLPPD    ++  +F      R +  + +                        P  
Sbjct: 17   IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRR--------------------GGPPFA 56

Query: 1822 FVEFEDVAHATRALAELYGR------------ALPRPNGGNGKGGIRLSFSKNPLGVRGP 1965
            FVEFED   A  A   +YGR              PR   G G+GG        P G  GP
Sbjct: 57   FVEFEDPRDAEDA---VYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGP 113

Query: 1966 GNSR 1977
             + R
Sbjct: 114  PSRR 117


>Q7ZX99||Q7ZX99 (TrEMBL: Xenopus laevis (African clawed frog)) Similar
            to Tial1 cytotoxic granule-associated RNA binding
            protein-like 1 (Fragment).
          Length = 427

 Score = 36.6 bits (83), Expect = 1.2
 Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1639 TLYVGNLPPDATESELRTLFS---PQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXX 1809
            TLYVGNL  D TE  +  LFS   P K  + ++ +T  +                     
Sbjct: 47   TLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGASVSFPVMPNANND---- 102

Query: 1810 XPMCFVEFEDVAHATRALAELYGRAL 1887
             P CFVEF +   A  ALA + GR +
Sbjct: 103  -PYCFVEFYEHRDAAAALAAMNGRKI 127


>Q90WN1|TIAR|Q90WN1 (TrEMBL: Xenopus laevis (African clawed frog))
            TIAR protein (Fragment).
          Length = 389

 Score = 36.6 bits (83), Expect = 1.2
 Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1639 TLYVGNLPPDATESELRTLFS---PQKGFRRLSFRTKNQXXXXXXXXXXXXXXXXXXXXX 1809
            TLYVGNL  D TE  +  LFS   P K  + ++ +T  +                     
Sbjct: 9    TLYVGNLSRDVTEVLILQLFSQIGPCKSCKSITEQTDGRRVGASVSFPVLPNANND---- 64

Query: 1810 XPMCFVEFEDVAHATRALAELYGRAL 1887
             P CFVEF +   A  ALA + GR +
Sbjct: 65   -PYCFVEFYEHRDAAAALAAMNGRKI 89


>Q10193|SRP1|SRP1_SCHPO (SP: Schizosaccharomyces pombe (Fission
            yeast)) Pre-mRNA splicing factor srp1.
          Length = 275

 Score = 35.8 bits (81), Expect = 2.1
 Identities = 22/55 (40%), Positives = 30/55 (54%)
 Frame = +1

Query: 1813 PMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPLGVRGPGNSR 1977
            P  FVE+ED   A  A  E++GR L R     G G +R+ ++K P    GPG+ R
Sbjct: 48   PFAFVEYEDSRDAEDAYYEVHGRRLER-----GGGVLRVEWAKQP-PPSGPGSKR 96


  Database: sptrembl
    Posted date:  Oct 14, 2003  6:47 PM
  Number of letters in database: 339,323,595
  Number of sequences in database:  1,070,300
  
Lambda     K      H
   0.313    0.131    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 459,404,166
Number of Sequences: 1070300
Number of extensions: 7951510
Number of successful extensions: 19530
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19493
length of database: 339,323,595
effective HSP length: 129
effective length of database: 201,254,895
effective search space used: 115520309730
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)