BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Candida_albicans_chr7-f2-534890-538246-22
         (3354 letters)

Database: sptrembl 
           1,070,300 sequences; 339,323,595 total letters

Searching.................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

P46463|PEX1|PEX1_PICPA (SP: Pichia pastoris (Yeast)) Peroxisome ...   850   0.0  
Q9UVU6|PEX1|Q9UVU6 (TrEMBL: Pichia angusta (Yeast) (Hansenula po...   758   0.0  
Q9UV06|PEX1|Q9UV06 (TrEMBL: Yarrowia lipolytica (Candida lipolyt...   693   0.0  
Q9HG04|PEX1|Q9HG04 (TrEMBL: Penicillium chrysogenum) Peroxin-1.       582   e-165
P24004|PEX1|PEX1_YEAST (SP: Saccharomyces cerevisiae (Baker's ye...   533   e-150
O43933|PEX1|PEX1_HUMAN (SP: Homo sapiens (Human)) Peroxisome bio...   374   e-102
O74941|SPCC553.03|O74941 (TrEMBL: Schizosaccharomyces pombe (Fis...   328   2e-88
Q9FQ60|PEX1|Q9FQ60 (TrEMBL: Arabidopsis thaliana (Mouse-ear cres...   328   3e-88
Q9FNP1||Q9FNP1 (TrEMBL: Arabidopsis thaliana (Mouse-ear cress)) ...   327   8e-88
Q9CU85|PEX1|Q9CU85 (TrEMBL: Mus musculus (Mouse)) 5430414H02Rik ...   315   3e-84
Q58556|MJ1156|YB56_METJA (SP: Methanococcus jannaschii) Cell div...   276   9e-73
Q9Y090|L(3)70DA|Q9Y090 (TrEMBL: Drosophila melanogaster (Fruit f...   276   2e-72
Q9VUC7|L(3)70DA|Q9VUC7 (TrEMBL: Drosophila melanogaster (Fruit f...   276   2e-72
O28972|AF1297|O28972 (TrEMBL: Archaeoglobus fulgidus) Cell divis...   269   1e-70
Q9YC86|APE1367|Q9YC86 (TrEMBL: Aeropyrum pernix) 726AA long hypo...   268   3e-70
Q97ZZ9|SSO0421|Q97ZZ9 (TrEMBL: Sulfolobus solfataricus) AAA fami...   266   1e-69
Q8SSJ5|ECU01_1230|Q8SSJ5 (TrEMBL: Encephalitozoon cuniculi) Prot...   265   4e-69
Q9Y910|APE2474|Q9Y910 (TrEMBL: Aeropyrum pernix) 699AA long hypo...   264   5e-69
Q976H7|ST0209|Q976H7 (TrEMBL: Sulfolobus tokodaii) Putative SAV ...   263   1e-68
P54609|CDC48A|C48A_ARATH (SP: Arabidopsis thaliana (Mouse-ear cr...   263   1e-68
Q9LZF6|CDC48E|C48E_ARATH (SP: Arabidopsis thaliana (Mouse-ear cr...   262   2e-68
Q975P4|ST0376|Q975P4 (TrEMBL: Sulfolobus tokodaii) Putative SAV ...   262   2e-68
P90532|CDCD|P90532 (TrEMBL: Dictyostelium discoideum (Slime mold...   262   2e-68
Q96372|CAFP|CC48_CAPAN (SP: Capsicum annuum (Bell pepper)) Cell ...   262   2e-68
Q877G7|SAV2|Q877G7 (TrEMBL: Sulfolobus acidocaldarius) AAA famil...   261   3e-68
Q9SCN8|CDC48D|C48D_ARATH (SP: Arabidopsis thaliana (Mouse-ear cr...   261   4e-68
O60058|SPBC56F2.07C|O60058 (TrEMBL: Schizosaccharomyces pombe (F...   259   1e-67
P54774|CDC48|CC48_SOYBN (SP: Glycine max (Soybean)) Cell divisio...   258   3e-67
O44008|VCP|O44008 (TrEMBL: Trypanosoma brucei) Valosin-containin...   257   8e-67
Q980U9|SSO0176|Q980U9 (TrEMBL: Sulfolobus solfataricus) AAA fami...   256   2e-66

>P46463|PEX1|PEX1_PICPA (SP: Pichia pastoris (Yeast)) Peroxisome
            biosynthesis protein PAS1 (Peroxin-1).
          Length = 1157

 Score =  850 bits (2197), Expect = 0.0
 Identities = 498/1172 (42%), Positives = 692/1172 (59%), Gaps = 81/1172 (6%)
 Frame = +1

Query: 82   MDNHKARISYKTLKSNLVNLPSSLTNLLFTANIQVQDVIIEMVXXXXXXXXXXXXXXXHY 261
            M++  A + Y  L++NL NLPS++T +LF+A+  +Q +I+E+                 Y
Sbjct: 1    MNSIDAVVRYSPLRNNLCNLPSAITTMLFSADFNIQQIIVELSWVPHQRAAQRRIA---Y 57

Query: 262  AGWSG---MSSSDISNLEIDPVFAQSLNLIDKTPIIVNLKLGNYESTNINLEPLTSSDWE 432
             GW+G    +SS    +EID   A +++L +   + VN+ +   ++  + LEP+TS+DWE
Sbjct: 58   CGWAGGITKTSSSNPVIEIDRSLASAIDLQENVNVTVNVHIDAVKAITVELEPVTSNDWE 117

Query: 433  LVELHAQSIEDKLLSQTRCVALNQVLVVYPSATTSAKLLVTDLGSTDHTFAKISPYCEIA 612
            +VE HAQ +E  LL+QTRCV  NQVLVVYP+  T+A+LLV  +     TFA++    E+ 
Sbjct: 118  IVETHAQVLETYLLNQTRCVYPNQVLVVYPTPQTTARLLVKKIEPEVSTFAQLFNDTEVQ 177

Query: 613  IAPKVREKEQKNNXXXXXXXXXXXXXXXXXXXXXXLEDYSD----LPLVLKRGISLPHKL 780
            IAPKV+++   ++                          ++    LP +L+R I+LP+  
Sbjct: 178  IAPKVQKRPSISSVRSDSSGHRIRRVRSSTSTATGRRSVTNNGEVLPSMLRRSITLPNNT 237

Query: 781  Y-NVNEAVAG-YFVYVDIDDELPQGFNSEYVAVSVIPGPNDK-----TSTKALQ------ 921
            Y +VN++ +G Y VY ++++ +P   N+ +V+VSV+ GP        TS+K  Q      
Sbjct: 238  YAHVNDSKSGGYKVYCNLNELIPALQNAHFVSVSVLVGPGTPDRTGLTSSKIKQLNDSID 297

Query: 922  -ATEDDXXXXXXXXXXXXXXXXXXRIIAKLVDYKSGPSGNIGLSRNLAIALNIENQIGNI 1098
             A +                    ++IA+LV     P GN+GLS  LA +L IEN +GN+
Sbjct: 298  QAAQTQTNAAGSSHPPESSYTETGKVIAELVHDSKSPKGNVGLSELLACSLGIENTVGNL 357

Query: 1099 ISLKPAIKNLPKRPTTFTIHPY------------IIHTKKKEITISSNKKENKLAQQLTE 1242
            ISL+ A K L K+PT   +H Y            I H  +++  + + K+ + L  QL +
Sbjct: 358  ISLEQARKPLIKKPTVLVLHKYTTVSPASLDRVTIKHATEEQKRVQNKKERDTLLTQLMQ 417

Query: 1243 IMYPGIASIPITNFTKIPIIANVLPYGGLLRFRKNDEYNAWIKPYNLDLKKPIKFEIGDE 1422
            ++ P + S   TN  K+P I  +LP GGLL+F++    + W  P   D    +  EIG+E
Sbjct: 418  LLSPLLDSCTFTNCVKLPKIGTLLPNGGLLQFKRIK--SGWTTPLGKD---NVSLEIGEE 472

Query: 1423 ILRPSSFIEQEIDKPTTNDTEEQEAIGLDNTVEDIVDSFITSDNTGTLVYGNSGSGKTLL 1602
            ILRP SF       P        ++       E++++S     + G+L++G SGSGK+L+
Sbjct: 473  ILRPESFSPSYDLLPDRKTHVRTQSDQYPTAQENLIESLSKIASGGSLLFGTSGSGKSLV 532

Query: 1603 LKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWNKPSVLILDNIDKL 1782
            +  VAQ +  + G+F K ++CD IM+E++ NL +  F       +W  PS+LIL+++D L
Sbjct: 533  ISQVAQIVTNK-GHFVKLLNCDKIMSESYNNL-RGIFEDIFSEVSWKAPSLLILEDLDSL 590

Query: 1783 MSVEMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKDNINKLLLGSHLIENF 1962
            +  E E+ D+++S QL+E+FIS L+                  K+++N L+  +HLIE+ 
Sbjct: 591  IPAEQEHSDSSQSRQLSEYFISKLSA--QTINRDITILASSKSKESLNSLIFTTHLIEHD 648

Query: 1963 HHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVS-ETEGYLPNDLKILS-----DRIY 2124
              L  PDK  R +IL  YL        + +L++ ++ ETEGYLP DLK+L      D I 
Sbjct: 649  FQLRAPDKEARKQILQSYLDTLNVFCSEGELLNNIAVETEGYLPKDLKVLCDRAYHDLIS 708

Query: 2125 HEVL-------------------------------------FXXXXXXXXXXXXXXXXXX 2193
             ++L                                                        
Sbjct: 709  RDILADSDSELDIEESSTPILNGSVGDIANKQSEIENGISGLELTNNSSSTIAVDKHGAT 768

Query: 2194 XXXXHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANC 2373
                + + AL+GY P +LRGVKLQKS + W DIGGL++AK+ILLETLEWPTKYAPIF++C
Sbjct: 769  IQKDNFDSALSGYIPQSLRGVKLQKSDVRWDDIGGLRDAKSILLETLEWPTKYAPIFSSC 828

Query: 2374 PLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERA 2553
            PLRLRSGILLYGYPGCGKTLLASA+A QCGLNFISIKGPEILNKYIG SEQSVRELFERA
Sbjct: 829  PLRLRSGILLYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERA 888

Query: 2554 QAAKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLI 2733
            QAAKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLI
Sbjct: 889  QAAKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLI 948

Query: 2734 DSALLRPGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQG 2913
            DSALLRPGRLDKSVICDMP+++DRLDILQS+T  M++S  VNL  +A + +GFSGAD+Q 
Sbjct: 949  DSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSGADLQA 1008

Query: 2914 LGYNAYLKAVHVTLEELSQRXXXXXXXXXXXXXXXXXSIEFFQV-GNSEKK----LKTNE 3078
            L YNAYLKAVH   E+L++                   +E FQ  GN+EKK    LK ++
Sbjct: 1009 LAYNAYLKAVH---EKLTKDESMAMAGEMDDNDDKKRMVECFQFSGNTEKKSLIELKPSD 1065

Query: 3079 KIQLLHQIQQFMNPNKDNSDSERKAGQDAMNKSKVLITHENFLESLKETKPSISHSEKIK 3258
            +  ++ +++     N ++++ E K+       + V+IT ++F +SL ETK SIS SEK K
Sbjct: 1066 RATVIKKLEHLYQGNGNHAEGETKSKLATTAANSVIITSKDFEDSLSETKQSISQSEKRK 1125

Query: 3259 LTKIYKEFVNDRDGNMPDGTPSNEIGGRTTLM 3354
            L  IY++F++ RDGNMPDGT SNEIG R+TLM
Sbjct: 1126 LEAIYQQFISGRDGNMPDGTASNEIGARSTLM 1157


>Q9UVU6|PEX1|Q9UVU6 (TrEMBL: Pichia angusta (Yeast) (Hansenula
            polymorpha)) Peroxin-1.
          Length = 1074

 Score =  758 bits (1956), Expect = 0.0
 Identities = 461/1133 (40%), Positives = 649/1133 (57%), Gaps = 42/1133 (3%)
 Frame = +1

Query: 82   MDNHKARISYKTLKSNLVNLPSSLTNLLFTANIQVQDVIIEMVXXXXXXXXXXXXXXXHY 261
            MD+ +  + ++ L + L+NLP+ L N     NI +Q++ +E+                  
Sbjct: 1    MDSQEVTVVFRPLNNCLINLPAPLINPFLANNILIQNIAVEL----NFRPSGAKKDTKWL 56

Query: 262  AGWSGMSSSDISNLEIDPVFAQSLNLIDKTPIIVNLKLGNYESTNINLEPLTSSDWELVE 441
             GW+G  SSD   +EID V+A SL L +   I++ L L   +  ++ LEP TSSDWEL E
Sbjct: 57   VGWNGYFSSDPKTIEIDSVYASSLGLRESRKIVIRLSLSLPKIQSVELEPETSSDWELTE 116

Query: 442  LHAQSIEDKLLSQTRCVALNQVLVVYPSATTS--AKLLVTDLGSTDHTFAK--ISPYCEI 609
            ++AQ++ED+ L+Q RC  + Q L VYPS++ +   K +V  + S      +  +    E+
Sbjct: 117  MYAQTVEDRFLNQVRCAVVGQKLAVYPSSSPNNVIKFVVKKIKSETDEIERGILVNDSEL 176

Query: 610  AIAPKVREKEQKNNXXXXXXXXXXXXXXXXXXXXXXLEDYSDLPLVLKRGISLPHKLY-N 786
             I PKV  ++++ +                         +  +P  L R ISLPH  + +
Sbjct: 177  HIIPKVHRRDKQQSDGASRRRRSVSGRRSS--------QFDPVPSCLLRSISLPHYTFQH 228

Query: 787  VNEAVAGYFVYVDIDDE-LPQGFNS-EYVAVSVIPGPND--KTSTKALQATEDDXXXXXX 954
            VN + A Y +YV++D   +   F S +YV VSVI GP    K S+ A Q    D      
Sbjct: 229  VNHSSANYEIYVNLDQNFINHQFKSIKYVQVSVITGPGTPAKASSVAEQTKNHDTGSSGS 288

Query: 955  XXXXXXXX--------------XXXXRIIAKLVDYKSGPSGNIGLSRNLAIALNIENQIG 1092
                                      +++A LV     P  + G+S  LAIAL IE++ G
Sbjct: 289  SRKNSSSVVDHKSVNGSVAQTDTEQRKVVAILVHDPLAPQRSAGVSPLLAIALGIEHRCG 348

Query: 1093 NIISLKPAIKNLPKRPTTFTIHPYIIHTKK-KEITISSNK-KENKLAQQLTEIMYP---- 1254
            +++ ++ A +       T  +H  +  T    E+    ++ ++ K A+   E+       
Sbjct: 349  DMVCIEAAPQKYGTDVHTVILHKIVTQTSTVNELAFKQDQDRQLKQAEANKELSAKFQEH 408

Query: 1255 ----GIASIPITNFTKIPIIANVLPYGGLLRFRKNDEYNAWIKPYNLDLKKPIKFEIGDE 1422
                     PITN  K+P+I ++LP GG L  R   ++        L  K P  FE+GDE
Sbjct: 409  FKRLNFTKCPITNGMKVPVIPDLLPQGGFLELRDGCQWAL------LGEKLP-NFELGDE 461

Query: 1423 ILRPSSFIEQEIDKPTTNDTEEQEAIGLDNTVEDIVDSFITSDNTGTLVYGNSGSGKTLL 1602
             L+P SF+E++ ++      ++   +G    +  +V S     N   ++ G SGSGKT L
Sbjct: 462  RLKPESFVERQYEQ------KDLPIVGHKELIARMVRSVRHGHNC--VLSGASGSGKTTL 513

Query: 1603 LKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWNKPSVLILDNIDKL 1782
            +  VA +L   HGY++K I+C+TI N+NF  + K    + ++   W+ PSVL+L+N+D L
Sbjct: 514  INEVAHRLVTLHGYYSKNINCETISNDNFHAI-KTLLEEAVKEVNWHSPSVLVLENLDSL 572

Query: 1783 MSVEMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKDNINKLLLGSHLIENF 1962
            +  EME+ D+  S Q++EF +++L  +  +             K+ +N  +  +HLI+  
Sbjct: 573  IPQEMEHGDSGLSRQVSEFLVNSLKVLTRERAISLLCSSKS--KEALNATVFQTHLIQQE 630

Query: 1963 HHLNPPDKSLRFEILDKYLTN-KLGLKIKVDLMDLVSETEGYLPNDLKILSDRIYHEVLF 2139
              L  PDK LR E+L  ++ +  + L+ +  L D+  ETEGYLP+DLK+L+DR +H+ + 
Sbjct: 631  FSLKAPDKELRKELLRSFINDYNMDLEKEEILNDITVETEGYLPSDLKVLADRTFHDYI- 689

Query: 2140 XXXXXXXXXXXXXXXXXXXXXXHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKNI 2319
                                  + E+AL G+ PS+LRGVKLQKS + WSDIGGLK+AK +
Sbjct: 690  --------SSKIDKDDFHLRASNFERALQGFVPSSLRGVKLQKSGVAWSDIGGLKDAKRV 741

Query: 2320 LLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEIL 2499
            LLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASA+  QCGLNFISIKGPEIL
Sbjct: 742  LLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAVVSQCGLNFISIKGPEIL 801

Query: 2500 NKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGA 2679
            NKYIGASEQS+RELF+RAQ+AKPC+LFFDEFDSIAPKRGHDSTGVTDRVVNQ+LTQMDGA
Sbjct: 802  NKYIGASEQSIRELFDRAQSAKPCVLFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGA 861

Query: 2680 EGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVN 2859
            EGLDGVYVLAATSRPDLIDSALLRPGRLDKS++CD+P+YE+RLDILQ++ +K  +S++  
Sbjct: 862  EGLDGVYVLAATSRPDLIDSALLRPGRLDKSILCDLPDYENRLDILQTVASKFHVSEECR 921

Query: 2860 LHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEELSQRXXXXXXXXXXXXXXXXXSIEFF 3039
            L   A K  G+SGAD+Q   YNAYLKAVH  L++L+                    IEFF
Sbjct: 922  LDHFARKLEGYSGADLQAFVYNAYLKAVHDNLDQLTH----------ANEGTTERKIEFF 971

Query: 3040 QV-------GNSEKKLKTNEKIQLLHQIQQFMNPNKDNSDSERKAGQDAMNKSKVLITHE 3198
             +       GN   K+ T  K   LH +    + +    DS+RK  Q       ++I + 
Sbjct: 972  SMLKNLQPSGNIAGKIDTICK--NLH-VTDLSSWDDAEQDSDRKPNQ-------IVICNS 1021

Query: 3199 NFLESLKETKPSISHSEKIKLTKIYKEFVN-DRDGNMPDGTPSNEIGGRTTLM 3354
            +F  +L+ETK SIS+ E     +IY +FV+  R+G++PDG  S +IGGRTTLM
Sbjct: 1022 HFETALEETKKSISNKELRNFARIYSQFVDGKREGHLPDGQASTDIGGRTTLM 1074


>Q9UV06|PEX1|Q9UV06 (TrEMBL: Yarrowia lipolytica (Candida lipolytica))
            Peroxisome assembly protein Pex1p.
          Length = 1023

 Score =  693 bits (1789), Expect = 0.0
 Identities = 433/1077 (40%), Positives = 609/1077 (56%), Gaps = 53/1077 (4%)
 Frame = +1

Query: 280  SSSDISN---LEIDPVFAQSLNLIDKTPIIVNLKLGNYESTNINLEPLTSSDWELVELHA 450
            S SD S    +E+DPVFA+S++L+  T ++++++L    +  I+LEP+T +DWE+VELHA
Sbjct: 3    SKSDYSGKDKIELDPVFAKSIDLLPNTQVVIDIQLNPKIAHTIHLEPVTVADWEIVELHA 62

Query: 451  QSIEDKLLSQTRCVALNQVLVVYPSATTSAKLLVT----DLGSTDHTFAKISPYCEIAIA 618
              +E ++++Q R V+ NQ + VYPS+TTSA L V     DLG+    FAK+SP  E+ +A
Sbjct: 63   AYLESRMINQVRAVSPNQPVTVYPSSTTSATLKVIRIEPDLGAAG--FAKLSPDSEVVVA 120

Query: 619  PKVREKEQKNNXXXXXXXXXXXXXXXXXXXXXXLEDYSDLPLVLKRGISLPHKLYN-VNE 795
            PK R+KE+K                                   ++G   PH L   ++E
Sbjct: 121  PKQRKKEEKQVKKRSGSARSTGSQK-------------------RKGGRGPHALRRAISE 161

Query: 796  AVAGYF---VYVDIDDELPQGFNSEYVAVSVIPGPNDKTSTKALQATEDDXXXXXXXXXX 966
               G+    V +D+    P+    + V++ VI  PN  +  +A     ++          
Sbjct: 162  DFDGHLRLEVSLDVSQLPPEFHQLKNVSIKVITPPNLASPQQAASIAVEEKSEESLSQNK 221

Query: 967  XXXXXX-----------XXRIIAKLVDYKSGPSGNIGLSRNLAIALNIENQIGNIISLKP 1113
                                I+A LV+  + P+G+  LS  LA AL I + +G++I  + 
Sbjct: 222  PPSSEPKVEVLPDIINPASEIVATLVNDTTSPTGHAKLSYALADALGIPSSVGHVIRFES 281

Query: 1114 AIKNLPKRPTTFTIHPYIIHT----KKKEITISSNKKENKLAQQ------LTEIMYPGIA 1263
            A K L ++P    IH +I  T    ++K + +   K  +           L E+    + 
Sbjct: 282  ASKPLSQKPGALVIHRFITKTVGAAEQKSLRLKGEKNADDGVSADDQFSLLEELKKLQML 341

Query: 1264 SIPITNFTKIPIIANVLPYGGLLRFRKNDEYNAWIKPYNLDLKKPIKFEIGDEILRPSSF 1443
              PITNF ++P I  +LP GG++  + ++    WI+   L  ++PI F  G EILR  S 
Sbjct: 342  EGPITNFQRLPPIPELLPLGGVIGLQNSE---GWIQGGYLG-EEPIPFVSGSEILRSESS 397

Query: 1444 IEQEIDKPTTNDTEEQEAIGLDNTVEDIVDSFITSDNTGTLVYGNSGSGKTLLLKLVAQQ 1623
            +      P+  ++E++  +GLDN +  I +  ++ D+ G L YG+ GSGK+ +L  + ++
Sbjct: 398  LS-----PSNIESEDKRVVGLDNMLNKI-NEVLSRDSIGCLDYGSRGSGKSAVLNHIKKE 451

Query: 1624 LNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWNKPSVLILDNIDKLMSVEMEN 1803
                H + T  I+C  I  +  Q + +    K     +W  PSVL LD+ID LM  E+E+
Sbjct: 452  CKVSHTH-TVSIACGLIAQDRVQAV-REILTKAFLEASWFSPSVLFLDDIDALMPAEVEH 509

Query: 1804 MDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKDNINKLLLGSHLIENFHHLNPPD 1983
             D++++ QLT+ F+     I                K++++  L+  H+ E   HL  PD
Sbjct: 510  ADSSRTRQLTQLFLELALPI--MKSRHVSVVASAQAKESLHMNLVTGHVFEELFHLKSPD 567

Query: 1984 KSLRFEILD---KYLTNKLGLKIKVDLMDLVSETEGYLPNDLKILSDRIYHEVLFXXXXX 2154
            K  R  IL    K +   +    + D++++ S+ +GYLP DL  LS+R  HE+       
Sbjct: 568  KEARLAILSEAVKLMDQNVSFS-QNDVLEIASQVDGYLPGDLWTLSERAQHEMALRQIEI 626

Query: 2155 XXXXXXXXXXXXXXXXXHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETL 2334
                                KAL  + PS+LRGVKLQKS++ W+DIGGLKE K +LLETL
Sbjct: 627  GLENPSIQLADFM-------KALEDFVPSSLRGVKLQKSNVKWNDIGGLKETKAVLLETL 679

Query: 2335 EWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIG 2514
            EWPTKYAPIFA+CPLRLRSG+LLYGYPGCGKT LASA+A QCGLNFISIKGPEILNKYIG
Sbjct: 680  EWPTKYAPIFASCPLRLRSGLLLYGYPGCGKTYLASAVAAQCGLNFISIKGPEILNKYIG 739

Query: 2515 ASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDG 2694
            ASEQSVRELF  AQAAKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDG
Sbjct: 740  ASEQSVRELF-GAQAAKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDG 798

Query: 2695 VYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITT-KMDLSDDVNLHEI 2871
            VYVLAATSRPDLID ALLRPGRLDK +ICD+P+YEDRLDIL++I   KM L  +V L  +
Sbjct: 799  VYVLAATSRPDLIDPALLRPGRLDKMLICDLPSYEDRLDILRAIVDGKMHLDGEVELEYV 858

Query: 2872 AEKTTGFSGADMQGLGYNAYLKAVHVTLEELSQRXXXXXXXXXXXXXXXXXSIEFFQ--V 3045
            A +T GFSGAD+Q + +NAYL+A+H  ++                       +EFFQ  +
Sbjct: 859  ASRTDGFSGADLQAVMFNAYLEAIHEVVD-------VADDTAADTPALEDKRLEFFQTTL 911

Query: 3046 GNSEK------------KLKTNEKIQLLHQIQQF---MNPNKDNSDSERKAGQDAMNKSK 3180
            G+++K            +    EK ++  +++     M+   DN D + +       K+ 
Sbjct: 912  GDAKKDPAAVQNEVMNARAAVAEKARVTAKLEALFKGMSVGVDNDDDKPR------KKAV 965

Query: 3181 VLITHENFLESLKETKPSISHSEKIKLTKIYKEFVNDRDGNMPDGTPSNEIGGRTTL 3351
            V+I  ++  +SL ET PSIS  E +KL  IY +FV+ R G+MP GT S ++GGR TL
Sbjct: 966  VVIKPQHMNKSLDETSPSISKKELLKLKGIYSQFVSGRSGDMPPGTASTDVGGRATL 1022


>Q9HG04|PEX1|Q9HG04 (TrEMBL: Penicillium chrysogenum) Peroxin-1.
          Length = 1213

 Score =  582 bits (1501), Expect = e-165
 Identities = 411/1232 (33%), Positives = 609/1232 (49%), Gaps = 146/1232 (11%)
 Frame = +1

Query: 97   ARISYKTLKSNLVNLPSSLTNLLFTANIQVQDVIIEMVXXXXXXXXXXXXXXXH-YAGWS 273
            A ++   LK+ LVNLP+SL  LL  AN   Q+VIIE+                  + GW+
Sbjct: 10   AEVALTPLKNCLVNLPASLVALLVNANTTAQNVIIELQYKSTSGKANGAPPQQSCFLGWT 69

Query: 274  GMSSS--------------------DISNLEIDPVFAQSLNLIDKTPIIVNLKLGNYEST 393
            GM S                     +IS +E+D  F + L L +   + + + L    + 
Sbjct: 70   GMPSKRRLAPVVGRDGINSGYPREQEISTVELDTTFGRLLGLTEGQKVGLFIHLDPPVAH 129

Query: 394  NINLEPLTSSDWELVELHAQSIEDKLLSQTRCV------ALNQV----LVVYPSATTSAK 543
             IN+EPLT  DWE++ELHA  +E  LLSQ R +      A   V    L ++ S T++A 
Sbjct: 130  TINIEPLTPEDWEIIELHATFLELNLLSQIRALPNPTYNAAQSVHMHPLALHLSPTSTAN 189

Query: 544  LLVTDLG---STDHTFAKISPYCEIAIAPKVREKEQKNNXXXXXXXXXXXXXXXXXXXXX 714
            ++VT L    S    FAKI+P  E+ +APKVR K  K++                     
Sbjct: 190  IVVTSLTPAPSDTSPFAKIAPDAEVIVAPKVRSKTSKSSRGDSRSATGSRKSAGGRSASS 249

Query: 715  XLEDYSDLPLVLKRGISLPHKLYNVNEAVAGYFVYVDIDDELPQGFN------------- 855
             +   S       RG      L  V+ +    +   +++D+  +G               
Sbjct: 250  TVRPKSGRSDSSTRGSLY---LRGVDRSATTQYFDGEVEDDANEGLRIWVDPDLLASHEL 306

Query: 856  --SEYVAVSVI--------PGPNDKTSTKALQATEDDXXXXXXXXXXXXXXXXXXRIIAK 1005
              + +  VSV+        P P  + +    Q + D                   +++AK
Sbjct: 307  RGATWACVSVVQPSGLKPPPDPQQQLAQAEQQKSNDSGAPTT-------------KLVAK 353

Query: 1006 LVDYKSGPSG-NIGLSRNLAIALNIENQIGNIISLKPAIKNLPKRPT-TFTIHPYIIHTK 1179
            L+ ++  P   +  +S  L+ AL  EN +G I+ ++ A   L +    T  I+P+I    
Sbjct: 354  LLPWEEAPDNRHAAISTLLSTALGAENMVGGILRVEAAAPPLHRSAVKTLKIYPFISDAS 413

Query: 1180 KKEITIS----SNKKENKLAQQLTEIMY------PGIASIPITNFTKIP---IIANVLPY 1320
            KK+  +     +    + LA++L +++Y       G+ S P+T+   IP      +V  +
Sbjct: 414  KKKDGLKFGADTTASRDALAERL-KVIYGSTGSDTGLFSGPLTDGMVIPKSEYHPSVSSF 472

Query: 1321 -GGLLRFR-----KNDEYNA---WIKPYNLDLKKPIKFEIGDEILRPSSFIEQEIDKPTT 1473
             G +LRF        DE  A   W+      L   ++ EI       SS +  E   P T
Sbjct: 473  DGAILRFDPPLKGSPDETKAMFGWLLGSEAKLNLEVQAEIPKPFDPSSSALPMEDPLPET 532

Query: 1474 NDTEEQEAIGLDNTVEDIVDSFITSDNTGTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTK 1653
                  + +G+D+ +E  +++   S +   LV G  G+GKT L  L+A +L + H +  K
Sbjct: 533  ----APQLVGIDSMIEQSLNNLTKSSSI--LVTGGLGAGKTALTHLLAHRLRRDHLFNVK 586

Query: 1654 YISCDTIMNEN--FQNLSK--NHFFKWIQTCA-WNKPSVLILDNIDKLMSVEMENM---D 1809
            Y SC  ++ +     N+ +  N  F     CA     SV+IL+++DKL   E E     D
Sbjct: 587  YFSCRKLVTDETRISNIKETLNRLFMSASWCARLGGQSVVILEDLDKLCPAETELQVGGD 646

Query: 1810 ATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKDNINKLLLGSHLIENFHHLNPPDKS 1989
              +S Q +E  I ++ + +               K+++N +++G H++    ++  PDK 
Sbjct: 647  NGRSRQNSEV-ICSMVREYCALNSSVVLLATAQAKESLNNVIIGGHVVREIINMRAPDKE 705

Query: 1990 LRFEILDKYLTNKLGLKIK--------------------------------------VDL 2055
             R  +L+K  +     +                                        V+ 
Sbjct: 706  GRRRVLEKLTSEDKPTESSNGHVRATSSSTQDSWLDPSNPGSRPSSSGGDGFVIGRDVEY 765

Query: 2056 MDLVSETEGYLPNDLKILSDRIYHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEKALAGYT 2235
            ++L  +T+GY+P DL +L  R  +E L                         E AL  +T
Sbjct: 766  LELAGKTDGYMPGDLVLLVARARNEALIRSVSDLTATSKMITLGLQD----FESALKDFT 821

Query: 2236 PSNLRGVKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYP 2415
            P++LR V L  S+  +S +GGL E + +LLETL++PTKYAPIFA CPLRLRSG+LLYG+P
Sbjct: 822  PASLRNVTLTSSTTTFSSVGGLFETRKMLLETLQYPTKYAPIFAQCPLRLRSGLLLYGFP 881

Query: 2416 GCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFD 2595
            GCGKT+LASA+AG+CGLNFIS+KGPEILNKYIGASE+SVR+LFERAQAA+PC+LFFDEFD
Sbjct: 882  GCGKTMLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFERAQAARPCVLFFDEFD 941

Query: 2596 SIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSV 2775
            SIAPKRGHDSTGVTDRVVNQ+LTQMDGAEGL GVYVLAATSRPDLID ALLRPGRLDKS+
Sbjct: 942  SIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLSGVYVLAATSRPDLIDPALLRPGRLDKSL 1001

Query: 2776 ICDMPNYEDRLDILQSITTKMDLSDDV--NLHEIAEKTTGFSGADMQGLGYNAYLKAVHV 2949
            +CDMPN+ DR+DI++S+  K+ +SD+V   L +IA +T GFSGAD+Q + YNA+L+AVH 
Sbjct: 1002 LCDMPNHADRVDIIRSVAEKLKMSDEVTSRLGDIATQTEGFSGADLQAVVYNAHLEAVHD 1061

Query: 2950 TLEELSQRXXXXXXXXXXXXXXXXXSIEFFQVGNSEKK--------LKTNEKIQLLHQIQ 3105
             L + S                    I+F    + E             + K++ +   +
Sbjct: 1062 ALGDHSTDTAKPNAKSKSANASSKSFIQFLYSSSEEASGSVSMPPPAVISAKLEAIKNSR 1121

Query: 3106 QFMNPNKDNSDSERKAGQDAMN---------KSKVLITHENFLESLKETKPSISHSEKIK 3258
            +     +  +     A     N         +  +++  E+   SL  T+ S+  +E+ +
Sbjct: 1122 RRQRQVEQGTSGANNATAPVANGTQSDTDELREDIIVRWEHVERSLATTRGSLPPAERRR 1181

Query: 3259 LTKIYKEFVNDRDGNMPDGTPSNEIGGRTTLM 3354
            L  IY+EF+  R+G MP+G  +NEIGGRT+LM
Sbjct: 1182 LQGIYREFIAGRNGEMPNGEAANEIGGRTSLM 1213


>P24004|PEX1|PEX1_YEAST (SP: Saccharomyces cerevisiae (Baker's yeast))
            Peroxisome biosynthesis protein PAS1 (Peroxin-1).
          Length = 1043

 Score =  533 bits (1373), Expect = e-150
 Identities = 307/676 (45%), Positives = 408/676 (60%), Gaps = 25/676 (3%)
 Frame = +1

Query: 1402 KFEIGDEILR--PSSFIEQEIDKPTTNDTEEQEAIGLDNTVEDIVDSFITSDNTGT---L 1566
            K E+ D I R  P  +  +E  + +    +E + I +++  +++V+ ++TS    T   +
Sbjct: 400  KEEVKDIIERHLPKHYHVKETGEVSRTSKDEDDFITVNSIKKEMVN-YLTSPIIATPAII 458

Query: 1567 VYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWNK 1746
            + G  G GKT LLK +  ++ + H  F KY  C+T+   +  + ++    +W   C W  
Sbjct: 459  LDGKQGIGKTRLLKELINEVEKDHHIFVKYADCETLHETSNLDKTQKLIMEWCSFCYWYG 518

Query: 1747 PSVLILDNIDKLMSVEMENMDATKSN--------QLTEFFISNLTKIHHQXXXXXXXXXX 1902
            PS+++LDN++ L      N D   SN        +L  FFI+ +TKI ++          
Sbjct: 519  PSLIVLDNVEALFGKPQAN-DGDPSNNGQWDNASKLLNFFINQVTKIFNKDNKRIRVLFS 577

Query: 1903 XXXKDNINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLM--DLVSET 2076
               K  IN LL   H +     L  PDK  R ++L+ + +    +K+  DL   DL  ET
Sbjct: 578  GKQKTQINPLLFDKHFVSETWSLRAPDKHARAKLLEYFFSKNQIMKLNRDLQFSDLSLET 637

Query: 2077 EGYLPNDLKILSDRIYHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEKALAGYTPSNLRGV 2256
            EG+ P DL+I +++I++++                           K+L+ +TPS LRGV
Sbjct: 638  EGFSPLDLEIFTEKIFYDLQLERDCDNVVTREL-----------FSKSLSAFTPSALRGV 686

Query: 2257 KLQK-SSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTL 2433
            KL K ++I W DIG L  AK++LLETLEWPTKY PIF NCPLRLRSGILLYGYPGCGKTL
Sbjct: 687  KLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTL 746

Query: 2434 LASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKR 2613
            LASA+A QCGLNFIS+KGPEILNK+IGASEQ++RELFERAQ+ KPCILFFDEFDSIAPKR
Sbjct: 747  LASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKR 806

Query: 2614 GHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPN 2793
            GHDSTGVTDRVVNQ+LTQMDGAEGLDGVY+LAATSRPDLIDSALLRPGRLDKSVIC++P 
Sbjct: 807  GHDSTGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPT 866

Query: 2794 YEDRLDILQSITTKMD---------LSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVH 2946
              +RLDILQ+I    D         L  + +L  IAEKT GFSGAD+QGL YNAYLK+VH
Sbjct: 867  ESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNAYLKSVH 926

Query: 2947 VTLEELSQRXXXXXXXXXXXXXXXXXSIEFFQVGNSEKKLKTNEKIQLLHQIQQFMNPNK 3126
              L    Q                  +IE+F +    ++ +   +++ L Q         
Sbjct: 927  RWLSAADQ----------SEVVPGNDNIEYFSINEHGRREENRLRLKTLLQ--------- 967

Query: 3127 DNSDSERKAGQDAMNKSKVLITHENFLESLKETKPSISHSEKIKLTKIYKEFVNDRDGNM 3306
             +   E K    A ++   ++T  + LE+ +ETKPSIS SE +KL  IY  F  DR+G M
Sbjct: 968  QDVVHETKTSTSAASELTAVVTINDLLEACQETKPSISTSELVKLRGIYDRFQKDRNGEM 1027

Query: 3307 PDGTPSNEIGGRTTLM 3354
            P+G  S +IG R +LM
Sbjct: 1028 PNGENSIDIGSRLSLM 1043


>O43933|PEX1|PEX1_HUMAN (SP: Homo sapiens (Human)) Peroxisome
            biogenesis factor 1 (Peroxin-1) (Peroxisome biogenesis
            disorder protein 1).
          Length = 1283

 Score =  374 bits (959), Expect = e-102
 Identities = 205/478 (42%), Positives = 288/478 (60%), Gaps = 13/478 (2%)
 Frame = +1

Query: 1552 NTGTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQT 1731
            N   L+ G  GSGK+ L K + ++   +     + + C  +  +  +N+ K     + + 
Sbjct: 592  NGALLLTGGKGSGKSTLAKAICKEAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSEA 651

Query: 1732 CAWNKPSVLILDNIDKLMSVEM-----ENMDATKSNQLTEFFISNLTKIHHQXXXXXXXX 1896
              W +PSV++LD++D +  +        + DA +S +L    ++++ K            
Sbjct: 652  -VWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHA-LNDMIKEFISMGSLVALI 709

Query: 1897 XXXXXKDNINKLLL---GSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIK----VDL 2055
                 + +++ LL+   G H+ +   H+ PP++  R EIL   + NKL   I     +DL
Sbjct: 710  ATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINKFTDLDL 769

Query: 2056 MDLVSETEGYLPNDLKILSDRIYHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEKALAGYT 2235
              +  ET G++  D  +L DR  H  L                         +KAL G+ 
Sbjct: 770  QHVAKETGGFVARDFTVLVDRAIHSRL-------SRQSISTREKLVLTTLDFQKALRGFL 822

Query: 2236 PSNLRGVKLQKS-SINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGY 2412
            P++LR V L K   + W  IGGL E + IL++T++ P KY  +FAN P+R R+GILLYG 
Sbjct: 823  PASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGP 882

Query: 2413 PGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEF 2592
            PG GKTLLA  IA +  +NFIS+KGPE+L+KYIGASEQ+VR++F RAQAAKPCILFFDEF
Sbjct: 883  PGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEF 942

Query: 2593 DSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKS 2772
            +SIAP+RGHD+TGVTDRVVNQ+LTQ+DG EGL GVYVLAATSRPDLID ALLRPGRLDK 
Sbjct: 943  ESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKC 1002

Query: 2773 VICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVH 2946
            V C  P+   RL+IL  ++  + L+DDV+L  +A  T  F+GAD++ L YNA L+A+H
Sbjct: 1003 VYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEALH 1060



 Score = 45.1 bits (105), Expect = 0.006
 Identities = 24/82 (29%), Positives = 43/82 (52%)
 Frame = +1

Query: 397 INLEPLTSSDWELVELHAQSIEDKLLSQTRCVALNQVLVVYPSATTSAKLLVTDLGSTDH 576
           + +EPL++ DWE++ELHA S+E  LL Q R V    +  V+    T   + +  L     
Sbjct: 106 VEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPKAIFPVWVDQQTYIFIQIVAL-IPAA 164

Query: 577 TFAKISPYCEIAIAPKVREKEQ 642
           ++ ++    ++ I PK R  ++
Sbjct: 165 SYGRLETDTKLLIQPKTRRAKE 186


>O74941|SPCC553.03|O74941 (TrEMBL: Schizosaccharomyces pombe (Fission
            yeast)) Putative peroxisome biosynthesis protein, AAA
            family ATPases.
          Length = 937

 Score =  328 bits (842), Expect = 2e-88
 Identities = 214/578 (37%), Positives = 304/578 (52%), Gaps = 6/578 (1%)
 Frame = +1

Query: 1567 VYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWNK 1746
            + G  G GK+ L+  +    +    YF   +SC  I   +F          +IQ   + +
Sbjct: 377  INGPKGCGKSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSFAKFQSFWNNVFIQAERY-E 435

Query: 1747 PSVLILDNIDKLMSVEMENMDA----TKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXK 1914
            PS++ LD++  L+S   EN +      +     +  I NL +                 +
Sbjct: 436  PSIIYLDDVHCLISSSNENGELGFVEEREIAFLQHQIINLKRKRKIIFIGFGEEFLTFSE 495

Query: 1915 DNINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVS-ETEGYLP 2091
            + +  LL    +      L     + R EIL           I +D ++ +S +TEGYL 
Sbjct: 496  NLVLPLLFQIKIA-----LPSLAVTRRKEILTTIFQENFS-DITMDSIEFISVKTEGYLM 549

Query: 2092 NDLKILSDRIYHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEKALAGYTPSNLRGVKLQKS 2271
             DL +   R+  E                          IEK L  + P  LR  K  KS
Sbjct: 550  TDLVLFVKRLLSEAFVEKIQNGPKHLMNKGL--------IEKTLKDFVPLQLRKAKFVKS 601

Query: 2272 SINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIA 2451
            SI W DI G++EAK  + + +E P KY+ I+  C LRL +GILL+GYPGCGKT LASAI+
Sbjct: 602  SIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAIS 661

Query: 2452 GQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTG 2631
                + FISIKGPE+L+KYIG SEQ VR+LF RAQ AKPC+LFFDEFDS+AP+RG DSTG
Sbjct: 662  STFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTG 721

Query: 2632 VTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLD 2811
            VTDRVVNQ+LTQMDGAE LDGVY++AAT+RPD+ID ALLRPGRLDK + CD+PN E+RL+
Sbjct: 722  VTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLE 781

Query: 2812 ILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEELSQRXXXXXX 2991
            +LQ +  +  + +   L +++  T G++ AD+  L Y+A+L AVH  L+ +S        
Sbjct: 782  VLQKLANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLKRVS-------- 833

Query: 2992 XXXXXXXXXXXSIEFFQVGNSEKKLKTNEKIQLLHQIQQFMNPNKDNSDSERKAGQDAMN 3171
                       +++  Q  +S   L T  K            P     +S       +M+
Sbjct: 834  ---------INAVDPSQTTSSFTNLTTESK----RNASMLALP----PESRYNQNMQSMS 876

Query: 3172 KSK-VLITHENFLESLKETKPSISHSEKIKLTKIYKEF 3282
             SK V+I     +E+LK+  PS++  E   L+ +Y++F
Sbjct: 877  DSKSVVIEDYMLMEALKKNSPSLNSEEFEHLSNLYRDF 914



 Score = 64.3 bits (155), Expect = 9e-09
 Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
 Frame = +1

Query: 103 ISYKTLKSNLVNLPSSLTNLLF--TANIQVQDVIIEMVXXXXXXXXXXXXXXXHYAGWSG 276
           +SYK+L+S LVN+P  L   +     N  VQ V+ +                  Y G SG
Sbjct: 5   VSYKSLRSCLVNVPELLLESISEPVQNYAVQAVVCK-----------NDIKKTFYFGISG 53

Query: 277 MSSSDISNLEIDPVFAQSLNLIDKTPIIVNLKLGNYESTNINLEPLTSSDWELVELHAQS 456
           + S    + EID  +A +L L +   I +++    +E   + +EP+TS+DWE+ E +A  
Sbjct: 54  IPSQ--FSFEIDSTYAHTLKLAENQEINLSIIDCTHEIEQLEIEPVTSNDWEIAERNAAW 111

Query: 457 IEDKLLSQTRCVALNQVLVVYPSAT 531
           +E+ LL Q R     + ++  PS T
Sbjct: 112 LEENLLVQYRVATTERFIIYLPSGT 136


>Q9FQ60|PEX1|Q9FQ60 (TrEMBL: Arabidopsis thaliana (Mouse-ear cress))
            Peroxisome biogenesis protein PEX1 (Fragment).
          Length = 1119

 Score =  328 bits (841), Expect = 3e-88
 Identities = 207/542 (38%), Positives = 296/542 (54%), Gaps = 13/542 (2%)
 Frame = +1

Query: 1564 LVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYI--SCDTIMNENFQNLSKNHFFKWIQTCA 1737
            L+YG  GSGKT+L +  A+   +Q       I  SC T+  E  Q++  +     I    
Sbjct: 586  LIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIH-HVLSSVIAEGL 644

Query: 1738 WNKPSVLILDNIDKLMSV--EMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXX 1911
             + PSV+ILD++D ++S   + E   A+    +   F++++   + +             
Sbjct: 645  EHAPSVIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAF 704

Query: 1912 KDNINKL-----LLGSHLIENFH-HLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSE 2073
              ++  L      L S    +FH  L  P  S R  IL   +  +L    +  L++L ++
Sbjct: 705  VASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAK 764

Query: 2074 TEGYLPNDLKILSDRIYHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEKALAGYTPSNLRG 2253
             EGY   DL+IL DR  H  +                          +A+  + P  +R 
Sbjct: 765  CEGYDAYDLEILVDRAVHAAI-----GRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRD 819

Query: 2254 VKLQKSS---INWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCG 2424
            +    S    + W D+GG+ + KN + E +E P+K+  IFA  PLRLRS +LLYG PGCG
Sbjct: 820  ITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCG 879

Query: 2425 KTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIA 2604
            KT +  A A  C L FIS+KGPE+LNKYIGASEQ+VR++F +A AA PCILFFDEFDSIA
Sbjct: 880  KTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIA 939

Query: 2605 PKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICD 2784
            PKRGHD+TGVTDRVVNQ LT++DG E L GV+V AATSRPDL+D ALLRPGRLD+ ++CD
Sbjct: 940  PKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCD 999

Query: 2785 MPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEEL 2964
             P+  +RL+IL  ++ K+ ++DD++L  IA  T GFSGAD+Q L  +A L AVH   E L
Sbjct: 1000 FPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAAVH---EYL 1056

Query: 2965 SQRXXXXXXXXXXXXXXXXXSIEFFQVGNSEKKLKTNEKIQLLHQIQQFMNPNKDNSDSE 3144
            ++                  SI       ++  +   EK +L     QF++  K + +++
Sbjct: 1057 NREDKPETGTTPIITDPLLKSI----ASKTKPSVSETEKQKLYDIYSQFLDSRKSSREAK 1112

Query: 3145 RK 3150
             K
Sbjct: 1113 GK 1114



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 42/126 (33%), Positives = 68/126 (53%)
 Frame = +1

Query: 268 WSGMSSSDISNLEIDPVFAQSLNLIDKTPIIVNLKLGNYESTNINLEPLTSSDWELVELH 447
           WSG SSS  S +EI  VFA+S++L D T + V +     ++T + +EP T  DWE++EL+
Sbjct: 56  WSGSSSSS-SAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWEVLELN 114

Query: 448 AQSIEDKLLSQTRCVALNQVLVVYPSATTSAKLLVTDLGSTDHTFAKISPYCEIAIAPKV 627
           A+  E  +LSQ R +       ++    T  +  V     +     ++ P  E+A+APK 
Sbjct: 115 AELAEAAILSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGV-VQLVPGTEVAVAPKR 173

Query: 628 REKEQK 645
           R++  K
Sbjct: 174 RDRNLK 179


>Q9FNP1||Q9FNP1 (TrEMBL: Arabidopsis thaliana (Mouse-ear cress))
            Similarity to ATPase.
          Length = 1125

 Score =  327 bits (837), Expect = 8e-88
 Identities = 196/474 (41%), Positives = 273/474 (57%), Gaps = 13/474 (2%)
 Frame = +1

Query: 1564 LVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYI--SCDTIMNENFQNLSKNHFFKWIQTCA 1737
            L+YG  GSGKT+L +  A+   +Q       I  SC T+  E  Q++  +     I    
Sbjct: 597  LIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIH-HVLSSVIAEGL 655

Query: 1738 WNKPSVLILDNIDKLMSV--EMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXX 1911
             + PSV+ILD++D ++S   + E   A+    +   F++++   + +             
Sbjct: 656  EHAPSVIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAF 715

Query: 1912 KDNINKL-----LLGSHLIENFH-HLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSE 2073
              ++  L      L S    +FH  L  P  S R  IL   +  +L    +  L++L ++
Sbjct: 716  VASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAK 775

Query: 2074 TEGYLPNDLKILSDRIYHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEKALAGYTPSNLRG 2253
             EGY   DL+IL DR  H  +                          +A+  + P  +R 
Sbjct: 776  CEGYDAYDLEILVDRAVHAAI-----GRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRD 830

Query: 2254 VKLQKSS---INWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCG 2424
            +    S    + W D+GG+ + KN + E +E P+K+  IFA  PLRLRS +LLYG PGCG
Sbjct: 831  ITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCG 890

Query: 2425 KTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIA 2604
            KT +  A A  C L FIS+KGPE+LNKYIGASEQ+VR++F +A AA PCILFFDEFDSIA
Sbjct: 891  KTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIA 950

Query: 2605 PKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICD 2784
            PKRGHD+TGVTDRVVNQ LT++DG E L GV+V AATSRPDL+D ALLRPGRLD+ ++CD
Sbjct: 951  PKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCD 1010

Query: 2785 MPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVH 2946
             P+  +RL+IL  ++ K+ ++DD++L  IA  T GFSGAD+Q L  +A L AVH
Sbjct: 1011 FPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAAVH 1064



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 42/126 (33%), Positives = 68/126 (53%)
 Frame = +1

Query: 268 WSGMSSSDISNLEIDPVFAQSLNLIDKTPIIVNLKLGNYESTNINLEPLTSSDWELVELH 447
           WSG SSS  S +EI  VFA+S++L D T + V +     ++T + +EP T  DWE++EL+
Sbjct: 67  WSGSSSSS-SAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWEVLELN 125

Query: 448 AQSIEDKLLSQTRCVALNQVLVVYPSATTSAKLLVTDLGSTDHTFAKISPYCEIAIAPKV 627
           A+  E  +LSQ R +       ++    T  +  V     +     ++ P  E+A+APK 
Sbjct: 126 AELAEAAILSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGV-VQLVPGTEVAVAPKR 184

Query: 628 REKEQK 645
           R++  K
Sbjct: 185 RDRNLK 190


>Q9CU85|PEX1|Q9CU85 (TrEMBL: Mus musculus (Mouse)) 5430414H02Rik
            protein (Fragment).
          Length = 490

 Score =  315 bits (806), Expect = 3e-84
 Identities = 155/245 (63%), Positives = 194/245 (79%), Gaps = 1/245 (0%)
 Frame = +1

Query: 2212 EKALAGYTPSNLRGVKLQKS-SINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLR 2388
            +KAL G+ P++LR V L K   + W  IGGL E + IL++T++ P KY  +FAN P+R R
Sbjct: 22   QKALRGFLPASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQR 81

Query: 2389 SGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKP 2568
            +GILLYG PG GKTLLA  +A + G+NFISIKGPE+L+KYIGASEQ+VR++F RAQAAKP
Sbjct: 82   TGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKP 141

Query: 2569 CILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALL 2748
            CILFFDEF+SIAP+RGHD+TGVTDRVVNQ+LTQ+DG EGL GVYVLAATSRPDLID ALL
Sbjct: 142  CILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALL 201

Query: 2749 RPGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNA 2928
            RPGRLDK V C  P+   RL+IL  ++  + L+DDV+L  +A  T  F+GAD++ L YNA
Sbjct: 202  RPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVASVTDSFTGADLKALLYNA 261

Query: 2929 YLKAV 2943
             L+A+
Sbjct: 262  QLEAL 266



 Score = 34.7 bits (78), Expect = 8.0
 Identities = 20/85 (23%), Positives = 36/85 (42%)
 Frame = +1

Query: 3064 LKTNEKIQLLHQIQQFMNPNKDNSDSERKAGQDAMNKSKVLITHENFLESLKETKPSISH 3243
            L   ++ QL  +I       +  S  +    Q    K+   I+  + + +L  T+PSIS 
Sbjct: 395  LTQEQRDQLRAEISIIKGRYRSQSGEDESLNQPGPIKTTFAISQAHLMTALAHTRPSISE 454

Query: 3244 SEKIKLTKIYKEFVNDRDGNMPDGT 3318
             E  +  ++Y+ F N +      GT
Sbjct: 455  DEGKEFAELYENFQNPKKRKNQSGT 479


>Q58556|MJ1156|YB56_METJA (SP: Methanococcus jannaschii) Cell division
            cycle protein 48 homolog MJ1156.
          Length = 903

 Score =  276 bits (707), Expect = 9e-73
 Identities = 206/628 (32%), Positives = 301/628 (47%), Gaps = 48/628 (7%)
 Frame = +1

Query: 1558 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 1737
            G L+ G  G+GKTLL K VA +                 + E  +NL K       +   
Sbjct: 215  GVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKI-----FEEAE 269

Query: 1738 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKD 1917
             N PS++ +D ID +     E     +   + +     LT +                + 
Sbjct: 270  ENAPSIIFIDEIDAIAPKRDEATGEVERRLVAQL----LTLMDGLKGRGQVVVIGATNRP 325

Query: 1918 N-INKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLPN 2094
            N ++  L      +    +  PD+  R EIL  + T  + L   VDL  L   T G++  
Sbjct: 326  NALDPALRRPGRFDREIVIGVPDREGRKEILQIH-TRNMPLAEDVDLDYLADVTHGFVGA 384

Query: 2095 DLKILSD----RIYHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEKALAGYTPSNLRGVKL 2262
            DL  L      R    VL                         ++AL    PS +R V +
Sbjct: 385  DLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKDVEPSAMREVLV 444

Query: 2263 QKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLAS 2442
            +  ++ W DIGGL+E K  L E +EWP K   +F    +R   G+LL+G PG GKTLLA 
Sbjct: 445  EVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAK 504

Query: 2443 AIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHD 2622
            A+A + G NFIS+KGPEI +K++G SE+++RE+F +A+ + PCI+FFDE D+IAPKRG D
Sbjct: 505  AVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRD 564

Query: 2623 -STGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYE 2799
             S+ VTD+VVNQ+LT++DG E    V V+AAT+RPD+ID ALLRPGRLD+ ++  +P+ +
Sbjct: 565  LSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEK 624

Query: 2800 DRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAV----------HV 2949
             RLDI +  T  M+L++DVNL E+A+KT G++GAD++ L   A + AV           V
Sbjct: 625  ARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRESIGKPWDIEV 684

Query: 2950 TLEELSQRXXXXXXXXXXXXXXXXXSI------------EFFQVGNSEKKL-----KTNE 3078
             L EL                     I            EF ++ N+  K+        E
Sbjct: 685  KLRELINYLQSISGTFRAAAVELNSVIKATKERESAEAGEFSELKNAIGKIISVLSPAKE 744

Query: 3079 KIQLLH-QIQQFMN---------PNKDNSDSERKAGQDAMNKSKVLITH----ENFLESL 3216
            KI+ +  +I +F+            KD +    K  +D + K K +I +    EN L +L
Sbjct: 745  KIEAVEKEIDKFLEVINKEELKPSEKDEAQKLAKYLKDILGKLKEMIDNIYELENKLNTL 804

Query: 3217 KETKPSISHSEKIKLTK-IYKEFVNDRD 3297
            KE   +    E IK T+ I + F    D
Sbjct: 805  KEQVSAEEIDEIIKTTQNIIQRFTTSLD 832



 Score =  194 bits (492), Expect = 8e-48
 Identities = 99/230 (43%), Positives = 146/230 (63%)
 Frame = +1

Query: 2275 INWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAG 2454
            + + DIGGLKE    + E +E P ++  +F    +    G+LL G PG GKTLLA A+A 
Sbjct: 176  VTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVAN 235

Query: 2455 QCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV 2634
            + G NF  I GPEI++KY+G +E+++R++FE A+   P I+F DE D+IAPKR   +  V
Sbjct: 236  EAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEV 295

Query: 2635 TDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDI 2814
              R+V Q+LT MDG +G   V V+ AT+RP+ +D AL RPGR D+ ++  +P+ E R +I
Sbjct: 296  ERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEI 355

Query: 2815 LQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEEL 2964
            LQ  T  M L++DV+L  +A+ T GF GAD+  L   A ++A+   L  +
Sbjct: 356  LQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSI 405



 Score = 43.5 bits (101), Expect = 0.017
 Identities = 44/216 (20%), Positives = 88/216 (40%), Gaps = 7/216 (3%)
 Frame = +1

Query: 1483 EEQEAIGLDNTVEDIVDSFITSDNTGTLVYGNSGSGKTLLLKLVAQQLNQQH------GY 1644
            E +EA+      +++ +        G L++G  G+GKTLL K VA +             
Sbjct: 463  ELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEI 522

Query: 1645 FTKYI-SCDTIMNENFQNLSKNHFFKWIQTCAWNKPSVLILDNIDKLMSVEMENMDATKS 1821
            F+K++   +  + E F+   +            + P ++  D ID +      ++ +  +
Sbjct: 523  FSKWVGESEKAIREIFRKARQ------------SAPCIIFFDEIDAIAPKRGRDLSSAVT 570

Query: 1822 NQLTEFFISNLTKIHHQXXXXXXXXXXXXXKDNINKLLLGSHLIENFHHLNPPDKSLRFE 2001
            +++    ++ L  +  +              D I+  LL    ++    +  PD+  R +
Sbjct: 571  DKVVNQLLTELDGM--EEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLD 628

Query: 2002 ILDKYLTNKLGLKIKVDLMDLVSETEGYLPNDLKIL 2109
            I  K  T  + L   V+L +L  +TEGY   D++ L
Sbjct: 629  IF-KIHTRSMNLAEDVNLEELAKKTEGYTGADIEAL 663


>Q9Y090|L(3)70DA|Q9Y090 (TrEMBL: Drosophila melanogaster (Fruit fly))
            L(3)70DA.
          Length = 1006

 Score =  276 bits (705), Expect = 2e-72
 Identities = 181/537 (33%), Positives = 284/537 (52%), Gaps = 23/537 (4%)
 Frame = +1

Query: 1420 EILRPSSFIEQEIDKPTTNDTEEQEAIGL---DNTVEDIVDSF-----ITSDNT-----G 1560
            +++RP   I +E + P T+    Q+ I L   D  V+ +V        +++DN+      
Sbjct: 421  DLVRPVGEIIKE-ETPPTSPLSVQDLIQLPEYDKIVDQVVQELRMNLCLSADNSVMRQCN 479

Query: 1561 TLVYGNSGSGKTLLLKLVAQQLNQQHGY----FTKYISCDTIMNENFQNLSKNHFFKWIQ 1728
             L+ G SG+GKT+L++ +  QL+++  Y    F           E+ Q   +N F     
Sbjct: 480  VLLAGASGTGKTVLVERILDQLSRKPDYCHFEFFHGSRSKGRKTESIQKDLRNIF----T 535

Query: 1729 TCAWNKPSVLILDNIDKLMSV--EMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXX 1902
            +C  + P++++L+N+D L     E  + D    N++ +     +  + +           
Sbjct: 536  SCLQHAPAIVVLENLDVLAHAAGEQSSQDGEYYNRMADTVYQLI--VQYTTNNAIAVIAT 593

Query: 1903 XXXKDNINKLLL---GSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSE 2073
                  +NK L    G H+ +    L   +++ R EI+ + L + + +   +DL+   + 
Sbjct: 594  VNELQTLNKRLSSPRGRHVFQTVARLPNLERADR-EIILRELCSHINVAKDLDLVKFSNL 652

Query: 2074 TEGYLPNDLKILSDRIYHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEK-ALAGYTPSNLR 2250
            TEGY   DL    +R     +F                      H     L G   +   
Sbjct: 653  TEGYRKCDLVQFVER----AIFYAYRISKTQPLLTNDQLIESLEHTNSYCLQGIQSNQRT 708

Query: 2251 GVKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKT 2430
            G     + +   ++ GL+    +L E L WP++Y  IF   PLR ++G+LLYG PG GKT
Sbjct: 709  GNDADANEMRVEELPGLESVVGVLEEVLMWPSRYPTIFNASPLRNQAGVLLYGPPGTGKT 768

Query: 2431 LLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPK 2610
             L S +A    L  IS+KGPE+L KYIG SE++VR LF RA++A+PC+LFFDEFDS+APK
Sbjct: 769  YLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVLFFDEFDSLAPK 828

Query: 2611 RGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMP 2790
            RGHDSTGVTDRVVNQ+LT++DG EGL GV V+AATSRP+L+D ALLR GR+D+ V C +P
Sbjct: 829  RGHDSTGVTDRVVNQLLTELDGVEGLQGVTVIAATSRPELLDPALLRSGRIDRLVECPLP 888

Query: 2791 NYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEE 2961
            +   R+ I +++++ + L + V+    A KT  ++GAD+Q +  +A + AV   L +
Sbjct: 889  DAPARVRIFEALSSTLSLDECVDFDWFAGKTANYTGADIQSILTSANMAAVKEALAQ 945



 Score = 52.4 bits (124), Expect = 4e-05
 Identities = 39/179 (21%), Positives = 76/179 (42%), Gaps = 3/179 (1%)
 Frame = +1

Query: 100 RISYKTLKSNLVNLPSSLTNLLFTANIQVQDVIIEMVXXXXXXXXXXXXXXXHYAGWS-- 273
           ++ Y+ ++SN V LP     ++ T +     +                    HYA W+  
Sbjct: 7   KVVYRPIRSNFVLLPDQYYGVVSTYDTGCLSL--------------QYNGRTHYASWAPQ 52

Query: 274 -GMSSSDISNLEIDPVFAQSLNLIDKTPIIVNLKLGNYESTNINLEPLTSSDWELVELHA 450
            G      + + I+   A+ + L +   +   L        ++++ P++S DWE++EL  
Sbjct: 53  KGGGGIKDTEIGINARAAKEIGLHENDLVKCALIADVLNLRSVHVTPVSSKDWEIIELST 112

Query: 451 QSIEDKLLSQTRCVALNQVLVVYPSATTSAKLLVTDLGSTDHTFAKISPYCEIAIAPKV 627
           + I   +L QTR V   Q+L+V+ + +    L V  L      + +I    E+ +AP +
Sbjct: 113 EKISGSVLEQTRIVNSTQILIVWINKSMQVALTVDRL-KPHMNYGRIDHNTELVVAPNL 170


>Q9VUC7|L(3)70DA|Q9VUC7 (TrEMBL: Drosophila melanogaster (Fruit fly))
            CG6760 protein (LD43687p).
          Length = 1006

 Score =  276 bits (705), Expect = 2e-72
 Identities = 181/537 (33%), Positives = 284/537 (52%), Gaps = 23/537 (4%)
 Frame = +1

Query: 1420 EILRPSSFIEQEIDKPTTNDTEEQEAIGL---DNTVEDIVDSF-----ITSDNT-----G 1560
            +++RP   I +E + P T+    Q+ I L   D  V+ +V        +++DN+      
Sbjct: 421  DLVRPVGEIIKE-ETPPTSPLSVQDLIQLPEYDKIVDQVVQELRMNLCLSADNSVMRQCN 479

Query: 1561 TLVYGNSGSGKTLLLKLVAQQLNQQHGY----FTKYISCDTIMNENFQNLSKNHFFKWIQ 1728
             L+ G SG+GKT+L++ +  QL+++  Y    F           E+ Q   +N F     
Sbjct: 480  VLLAGASGTGKTVLVERILDQLSRKPDYCHFEFFHGSRSKGRKTESIQKDLRNIF----T 535

Query: 1729 TCAWNKPSVLILDNIDKLMSV--EMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXX 1902
            +C  + P++++L+N+D L     E  + D    N++ +     +  + +           
Sbjct: 536  SCLQHAPAIVVLENLDVLAHAAGEQSSQDGEYYNRMADTVYQLI--VQYTTNNAIAVIAT 593

Query: 1903 XXXKDNINKLLL---GSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSE 2073
                  +NK L    G H+ +    L   +++ R EI+ + L + + +   +DL+   + 
Sbjct: 594  VNELQTLNKRLSSPRGRHVFQTVARLPNLERADR-EIILRELCSHINVAKDLDLVKFSNL 652

Query: 2074 TEGYLPNDLKILSDRIYHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEK-ALAGYTPSNLR 2250
            TEGY   DL    +R     +F                      H     L G   +   
Sbjct: 653  TEGYRKCDLVQFVER----AIFYAYRISKTQPLLTNDQLIESLEHTNSYCLQGIQSNQRT 708

Query: 2251 GVKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKT 2430
            G     + +   ++ GL+    +L E L WP++Y  IF   PLR ++G+LLYG PG GKT
Sbjct: 709  GNDADANEMRVEELPGLESVVGVLEEVLMWPSRYPTIFNASPLRNQAGVLLYGPPGTGKT 768

Query: 2431 LLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPK 2610
             L S +A    L  IS+KGPE+L KYIG SE++VR LF RA++A+PC+LFFDEFDS+APK
Sbjct: 769  YLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVLFFDEFDSLAPK 828

Query: 2611 RGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMP 2790
            RGHDSTGVTDRVVNQ+LT++DG EGL GV V+AATSRP+L+D ALLR GR+D+ V C +P
Sbjct: 829  RGHDSTGVTDRVVNQLLTELDGVEGLQGVTVIAATSRPELLDPALLRSGRIDRLVECPLP 888

Query: 2791 NYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEE 2961
            +   R+ I +++++ + L + V+    A KT  ++GAD+Q +  +A + AV   L +
Sbjct: 889  DAPARVRIFEALSSTLSLDECVDFDWFAGKTANYTGADIQSILTSANMAAVKEALAQ 945



 Score = 52.4 bits (124), Expect = 4e-05
 Identities = 39/179 (21%), Positives = 76/179 (42%), Gaps = 3/179 (1%)
 Frame = +1

Query: 100 RISYKTLKSNLVNLPSSLTNLLFTANIQVQDVIIEMVXXXXXXXXXXXXXXXHYAGWS-- 273
           ++ Y+ ++SN V LP     ++ T +     +                    HYA W+  
Sbjct: 7   KVVYRPIRSNFVLLPDQYYGVVSTYDTGCLSL--------------QYNGRTHYASWAPQ 52

Query: 274 -GMSSSDISNLEIDPVFAQSLNLIDKTPIIVNLKLGNYESTNINLEPLTSSDWELVELHA 450
            G      + + I+   A+ + L +   +   L        ++++ P++S DWE++EL  
Sbjct: 53  KGGGGIKDTEIGINARAAKEIGLHENDLVKCALIADVLNLRSVHVTPVSSKDWEIIELST 112

Query: 451 QSIEDKLLSQTRCVALNQVLVVYPSATTSAKLLVTDLGSTDHTFAKISPYCEIAIAPKV 627
           + I   +L QTR V   Q+L+V+ + +    L V  L      + +I    E+ +AP +
Sbjct: 113 EKISGSVLEQTRIVNSTQILIVWINKSMQVALTVDRL-KPHMNYGRIDHNTELVVAPNL 170


>O28972|AF1297|O28972 (TrEMBL: Archaeoglobus fulgidus) Cell division
            control protein 48 (CDC48-1).
          Length = 733

 Score =  269 bits (688), Expect = 1e-70
 Identities = 167/467 (35%), Positives = 256/467 (54%), Gaps = 5/467 (1%)
 Frame = +1

Query: 1558 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 1737
            G L+YG  G+GKTL+ K VA   N+   +F   IS   IM++ +   S+    +  +   
Sbjct: 218  GVLLYGPPGTGKTLIAKAVA---NEVDAHFIP-ISGPEIMSKYYGE-SEQRLREIFEEAK 272

Query: 1738 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKD 1917
             N PS++ +D ID + + + E +      ++    ++ +  +  +              D
Sbjct: 273  ENAPSIIFIDEIDSI-APKREEVTGEVERRVVAQLLALMDGL--EARGDVIVIAATNRPD 329

Query: 1918 NINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLPND 2097
             I+  L      +    +  PDK  R EIL+ + T K+ L   VDL +L   T G++  D
Sbjct: 330  AIDPALRRPGRFDREIEIGVPDKEGRKEILEIH-TRKMPLAEDVDLEELAELTNGFVGAD 388

Query: 2098 LKILSDRI----YHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEKALAGYTPSNLRGVKLQ 2265
            L+ L           VL                          +AL    PS +R V ++
Sbjct: 389  LEALCKEAAMHALRRVLPEIDIEAEEIPAEVIENLKVTREDFMEALKNIEPSAMREVLVE 448

Query: 2266 KSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASA 2445
              ++ W DIGGL+ AK  L+E +EWP KY  +F    ++   GILL+G PG GKTLLA A
Sbjct: 449  VPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKA 508

Query: 2446 IAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGH-D 2622
            +A +   NFIS+KGPE+L+K++G SE+ VRE+F +A+   PC++FFDE DS+AP+RG   
Sbjct: 509  VANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIG 568

Query: 2623 STGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYED 2802
             + VT+RVV+Q+LT++DG E L  V V+AAT+RPD+ID ALLRPGRL++ +    P+ + 
Sbjct: 569  DSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKA 628

Query: 2803 RLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAV 2943
            R++I +       L+DDVN+ E+AEKT G+SGAD++ +   A + A+
Sbjct: 629  RVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAI 675



 Score =  206 bits (523), Expect = 2e-51
 Identities = 110/237 (46%), Positives = 148/237 (62%)
 Frame = +1

Query: 2254 VKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTL 2433
            VK     + + DIGGLK    ++ E +E P K+  +F    +    G+LLYG PG GKTL
Sbjct: 172  VKRAVPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTL 231

Query: 2434 LASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKR 2613
            +A A+A +   +FI I GPEI++KY G SEQ +RE+FE A+   P I+F DE DSIAPKR
Sbjct: 232  IAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKR 291

Query: 2614 GHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPN 2793
               +  V  RVV Q+L  MDG E    V V+AAT+RPD ID AL RPGR D+ +   +P+
Sbjct: 292  EEVTGEVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPD 351

Query: 2794 YEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEEL 2964
             E R +IL+  T KM L++DV+L E+AE T GF GAD++ L   A + A+   L E+
Sbjct: 352  KEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEI 408


>Q9YC86|APE1367|Q9YC86 (TrEMBL: Aeropyrum pernix) 726AA long
            hypothetical transitional endoplasmic reticulum ATPase.
          Length = 726

 Score =  268 bits (686), Expect = 3e-70
 Identities = 167/475 (35%), Positives = 255/475 (53%), Gaps = 8/475 (1%)
 Frame = +1

Query: 1558 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 1737
            G L+YG  G+GKTLL K +A ++     YF   I+   IM++ +   S+    +  +   
Sbjct: 220  GILLYGPPGTGKTLLAKALANEIG---AYFIS-INGPEIMSKYYGE-SEQRLREIFKEAE 274

Query: 1738 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKD 1917
             N PS++ +D ID + + + E +      ++    ++ +  +  +              D
Sbjct: 275  ENAPSIIFIDEIDAI-APKREEVTGEVEKRVVAQLLTLMDGLKERGRVIVIGATNR--PD 331

Query: 1918 NINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLPND 2097
             I+  L      +    + PPDK  R EIL K  T  + L   VDL  L   T GY   D
Sbjct: 332  AIDPALRRPGRFDREIEIRPPDKRARAEIL-KVHTRNMPLAEDVDLDKLAEMTHGYTGAD 390

Query: 2098 LKILSDRIYHEVLFXXXXXXXXXXXXXXXXXXX------XXXHIEKALAGYTPSNLRGVK 2259
            L  L+       L                                +A+    P+ +R + 
Sbjct: 391  LAALAKEAAMAALRRFIREGKINFEAKEIPATVLKELKVTMKDFMEAMKMIRPTLIREIY 450

Query: 2260 LQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLA 2439
            ++   + WSDIGGL+EAK  L E +EWP K+  IF    +R   G+LL+G PG GKTLLA
Sbjct: 451  VEVPEVRWSDIGGLEEAKQALREAVEWPLKHPEIFEKMGIRPPRGVLLFGPPGTGKTLLA 510

Query: 2440 SAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRG- 2616
             A+A + G NFI+++GPEIL+K++G SE+++R++FERA+ A P ++FFDE D+IAP RG 
Sbjct: 511  KAVATESGANFIAVRGPEILSKWVGESERAIRKIFERARQAAPAVVFFDEIDAIAPARGA 570

Query: 2617 -HDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPN 2793
              D++GVTDR+VNQML +MDG + L  V V+ AT+RPD++D ALLRPGR D+ +    P+
Sbjct: 571  RFDTSGVTDRIVNQMLAEMDGIQPLSNVVVIGATNRPDILDPALLRPGRFDRLIYVPPPD 630

Query: 2794 YEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLE 2958
             E R +I +  T K+ L +DV+L ++AE T G++GAD++ +   A +  +   LE
Sbjct: 631  KEARKEIFKIHTKKVPLGEDVDLEKLAEMTEGYTGADIEAVVREAVMAKLREKLE 685



 Score =  201 bits (510), Expect = 6e-50
 Identities = 111/239 (46%), Positives = 149/239 (62%)
 Frame = +1

Query: 2245 LRGVKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCG 2424
            LRGV      + W DIG L+EAK  + E +E P K+  IF +  +    GILLYG PG G
Sbjct: 175  LRGVP----KVTWEDIGDLEEAKERIREIVELPMKHPEIFKHLGIEPPKGILLYGPPGTG 230

Query: 2425 KTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIA 2604
            KTLLA A+A + G  FISI GPEI++KY G SEQ +RE+F+ A+   P I+F DE D+IA
Sbjct: 231  KTLLAKALANEIGAYFISINGPEIMSKYYGESEQRLREIFKEAEENAPSIIFIDEIDAIA 290

Query: 2605 PKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICD 2784
            PKR   +  V  RVV Q+LT MDG +    V V+ AT+RPD ID AL RPGR D+ +   
Sbjct: 291  PKREEVTGEVEKRVVAQLLTLMDGLKERGRVIVIGATNRPDAIDPALRRPGRFDREIEIR 350

Query: 2785 MPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEE 2961
             P+   R +IL+  T  M L++DV+L ++AE T G++GAD+  L   A + A+   + E
Sbjct: 351  PPDKRARAEILKVHTRNMPLAEDVDLDKLAEMTHGYTGADLAALAKEAAMAALRRFIRE 409



 Score = 47.4 bits (111), Expect = 0.001
 Identities = 65/284 (22%), Positives = 112/284 (39%), Gaps = 16/284 (5%)
 Frame = +1

Query: 1300 IANVLPYGGLLRFRKNDEYNAWIKPYNLDLKKPIKFEIGD-----EILRPSSFIEQEIDK 1464
            +A       L RF +  + N   K     + K +K  + D     +++RP+   E  ++ 
Sbjct: 394  LAKEAAMAALRRFIREGKINFEAKEIPATVLKELKVTMKDFMEAMKMIRPTLIREIYVEV 453

Query: 1465 PTTNDTE----EQEAIGLDNTVE------DIVDSFITSDNTGTLVYGNSGSGKTLLLKLV 1614
            P    ++    E+    L   VE      +I +        G L++G  G+GKTLL K V
Sbjct: 454  PEVRWSDIGGLEEAKQALREAVEWPLKHPEIFEKMGIRPPRGVLLFGPPGTGKTLLAKAV 513

Query: 1615 AQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWNKPSVLILDNIDKLMSVE 1794
            A     + G     +    I+++ +   S+    K  +      P+V+  D ID +    
Sbjct: 514  A----TESGANFIAVRGPEILSK-WVGESERAIRKIFERARQAAPAVVFFDEIDAIAPAR 568

Query: 1795 MENMDAT-KSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKDNINKLLLGSHLIENFHHL 1971
                D +  ++++    ++ +  I  Q              D ++  LL     +   ++
Sbjct: 569  GARFDTSGVTDRIVNQMLAEMDGI--QPLSNVVVIGATNRPDILDPALLRPGRFDRLIYV 626

Query: 1972 NPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLPNDLK 2103
             PPDK  R EI  K  T K+ L   VDL  L   TEGY   D++
Sbjct: 627  PPPDKEARKEIF-KIHTKKVPLGEDVDLEKLAEMTEGYTGADIE 669


>Q97ZZ9|SSO0421|Q97ZZ9 (TrEMBL: Sulfolobus solfataricus) AAA family
            ATPase.
          Length = 769

 Score =  266 bits (681), Expect = 1e-69
 Identities = 183/582 (31%), Positives = 292/582 (50%), Gaps = 8/582 (1%)
 Frame = +1

Query: 1558 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 1737
            G L+YG  G GKTLL + +A ++     YFT  I+   IM++ F   S+    +  +   
Sbjct: 237  GVLLYGPPGVGKTLLARALANEIG---AYFTS-INGPEIMSK-FYGESEQRLREIFEEAE 291

Query: 1738 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKD 1917
             N P+++ +D ID + + + E +      ++    ++ +  I  +              D
Sbjct: 292  KNSPAIIFIDEIDAI-APKREEVTGEVEKRVVAQLLTLMDGI--KGRGKVIVIGATNRPD 348

Query: 1918 NINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLPND 2097
             ++  L      +    + PPD   R EIL  + T  + L   VDL  +  +T GY   D
Sbjct: 349  AVDPALRRPGRFDREIEIRPPDAKARKEILQVH-TRNMPLAEDVDLDKISEQTHGYTGAD 407

Query: 2098 LKILSDRIYHEVLFXXXXXXXXXXXXXXX------XXXXXXXHIEKALAGYTPSNLRGVK 2259
            L  L+       L                                 A+    P+ LR V 
Sbjct: 408  LAALAREAAMNALRRFINERKINLEQEQIPVDVLKELKVTMQDFIDAMKFIQPTLLREVY 467

Query: 2260 LQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLA 2439
            ++   + W DIGGL+EAK  L E +EWP K+  +F    +R   GILL+G PG GKT+LA
Sbjct: 468  VEVPKVKWEDIGGLEEAKQQLREAVEWPLKFPEMFEKLGIRPPKGILLFGPPGTGKTMLA 527

Query: 2440 SAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRG- 2616
             A+A + G NFI+++GPEIL+K++G SE++VRE+F RA+   PC++FFDE DSIAP RG 
Sbjct: 528  KAVATESGANFIAVRGPEILSKWVGESEKAVREIFRRARQTAPCVIFFDEIDSIAPMRGF 587

Query: 2617 -HDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPN 2793
             HDS GVT+R+VNQ+L++MDG + L+ V V+AAT+RPD++D ALLRPGR D+ +    P+
Sbjct: 588  THDS-GVTERIVNQLLSEMDGIQSLNRVVVIAATNRPDILDPALLRPGRFDRLIYVPPPD 646

Query: 2794 YEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEELSQR 2973
             + R++IL+  T  + +   VNL E+A+K  G++GAD++ L       A   T++ L Q+
Sbjct: 647  EKARIEILKIYTRTLPIDSSVNLEELAKKLEGYTGADIEAL-------ARETTMKVLRQK 699

Query: 2974 XXXXXXXXXXXXXXXXXSIEFFQVGNSEKKLKTNEKIQLLHQIQQFMNPNKDNSDSERKA 3153
                                ++   N  KK                    KD   ++ K 
Sbjct: 700  --------------------YYDCLNKAKK------------------ECKDQECTD-KT 720

Query: 3154 GQDAMNKSKVLITHENFLESLKETKPSISHSEKIKLTKIYKE 3279
             +  M+  ++ IT ++FL+++K   PS++ ++ ++   + KE
Sbjct: 721  IKSCMSNLEIKITMQDFLDTMKIVTPSLTKADIMRYENMVKE 762



 Score =  199 bits (507), Expect = 1e-49
 Identities = 106/251 (42%), Positives = 156/251 (62%), Gaps = 4/251 (1%)
 Frame = +1

Query: 2221 LAGYTPSNLRGVKLQKSS----INWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLR 2388
            + G T   +R   +++S+    + W DIG L++ K  + E +E P ++  +F +  +   
Sbjct: 176  ITGRTSLEIRQEPVKESAAVPKVTWEDIGDLEDVKEKIREIVELPMRHPEVFQHLGIEPP 235

Query: 2389 SGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKP 2568
             G+LLYG PG GKTLLA A+A + G  F SI GPEI++K+ G SEQ +RE+FE A+   P
Sbjct: 236  KGVLLYGPPGVGKTLLARALANEIGAYFTSINGPEIMSKFYGESEQRLREIFEEAEKNSP 295

Query: 2569 CILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALL 2748
             I+F DE D+IAPKR   +  V  RVV Q+LT MDG +G   V V+ AT+RPD +D AL 
Sbjct: 296  AIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGIKGRGKVIVIGATNRPDAVDPALR 355

Query: 2749 RPGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNA 2928
            RPGR D+ +    P+ + R +ILQ  T  M L++DV+L +I+E+T G++GAD+  L   A
Sbjct: 356  RPGRFDREIEIRPPDAKARKEILQVHTRNMPLAEDVDLDKISEQTHGYTGADLAALAREA 415

Query: 2929 YLKAVHVTLEE 2961
             + A+   + E
Sbjct: 416  AMNALRRFINE 426


>Q8SSJ5|ECU01_1230|Q8SSJ5 (TrEMBL: Encephalitozoon cuniculi) Protein
            of the CDC48/PAS1/SEC28 family of ATPases.
          Length = 780

 Score =  265 bits (676), Expect = 4e-69
 Identities = 167/480 (34%), Positives = 257/480 (53%), Gaps = 8/480 (1%)
 Frame = +1

Query: 1558 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 1737
            G L+YG  G+GKTL+ + +A +     G F   I+   IM++     S+++  K  +   
Sbjct: 244  GILLYGPPGTGKTLIARAIANET----GAFLFLINGPEIMSK-MAGESESNLRKAFEEAE 298

Query: 1738 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKD 1917
             N P+++ +D ID L     ++    +   +++     LT +                + 
Sbjct: 299  KNSPAIIFIDEIDALAPKREKSQGEVERRIVSQL----LTLMDGMKARSNVIVLGATNRP 354

Query: 1918 N-INKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLPN 2094
            N I+  L      +    +  PD++ R EIL +  T  + +   VDL+ +  E  G+  +
Sbjct: 355  NSIDPALRRYGRFDREIEIGVPDETGRLEIL-RIHTKNMKMSEDVDLVAINKELHGFTGS 413

Query: 2095 DLKILSDRI----YHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEKALAGYTPSNLRGVKL 2262
            DL  L          E L                       +   A+    PS+LR   +
Sbjct: 414  DLASLCSEAALQQIREKLPQIDLDSEKIDAKVLASLKVNSENFRYAIEHTDPSSLRETVI 473

Query: 2263 QKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLAS 2442
            Q  ++ WSDIGGL++ K  L ET+++P +Y   F    +    G+L YG PGCGKTLLA 
Sbjct: 474  QSPNVKWSDIGGLEQVKQELRETVQYPVEYPEKFIKFGMTPAKGVLFYGPPGCGKTLLAK 533

Query: 2443 AIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKR-GH 2619
            A+A +C  NFISIKGPE+L+ ++G SE ++R+LF RA+ A PC+LFFDE DSIA  R G+
Sbjct: 534  AVATECKANFISIKGPELLSMWVGESESNIRDLFARARGAAPCVLFFDEIDSIAKARSGN 593

Query: 2620 D-STGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNY 2796
            D S+G TDR++NQ+L++MDG      V+V+ AT+RPD +DSAL+RPGRLD+ V   +P+ 
Sbjct: 594  DGSSGATDRMLNQLLSEMDGINQKKNVFVIGATNRPDQLDSALMRPGRLDQLVYIPLPDL 653

Query: 2797 EDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLE-ELSQR 2973
            + R+ ILQ+   K  LS +++L ++AE T  FSGAD+  +   A   A+  T+E EL Q+
Sbjct: 654  DSRVSILQATLKKTPLSPEIDLRQLAEATDKFSGADLSEICQRACKLAIRETIEYELEQK 713



 Score =  171 bits (434), Expect = 4e-41
 Identities = 91/237 (38%), Positives = 143/237 (60%)
 Frame = +1

Query: 2254 VKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTL 2433
            V+ + + + + D+GG +     + E +E P +++ +++   ++   GILLYG PG GKTL
Sbjct: 198  VEKEFNMVGYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKTL 257

Query: 2434 LASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKR 2613
            +A AIA + G     I GPEI++K  G SE ++R+ FE A+   P I+F DE D++APKR
Sbjct: 258  IARAIANETGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPKR 317

Query: 2614 GHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPN 2793
                  V  R+V+Q+LT MDG +    V VL AT+RP+ ID AL R GR D+ +   +P+
Sbjct: 318  EKSQGEVERRIVSQLLTLMDGMKARSNVIVLGATNRPNSIDPALRRYGRFDREIEIGVPD 377

Query: 2794 YEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEEL 2964
               RL+IL+  T  M +S+DV+L  I ++  GF+G+D+  L   A L+ +   L ++
Sbjct: 378  ETGRLEILRIHTKNMKMSEDVDLVAINKELHGFTGSDLASLCSEAALQQIREKLPQI 434


>Q9Y910|APE2474|Q9Y910 (TrEMBL: Aeropyrum pernix) 699AA long
            hypothetical transitional endoplasmic reticulum ATPase.
          Length = 699

 Score =  264 bits (675), Expect = 5e-69
 Identities = 170/480 (35%), Positives = 257/480 (53%), Gaps = 8/480 (1%)
 Frame = +1

Query: 1558 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 1737
            G L+YG  G+GKTLL K VA   N+   YF   I+   IM++ +   S+    +  +   
Sbjct: 186  GILLYGPPGTGKTLLAKAVA---NEADAYFIS-INGPEIMSKYYGE-SEQRLREIFEEAK 240

Query: 1738 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKD 1917
             N PS++ +D ID +     E +   +   + +     L  +                + 
Sbjct: 241  KNAPSIIFIDEIDAIAPKRDEVVGEVERRVVAQL----LALMDGLEARGNVIVIAATNRP 296

Query: 1918 N-INKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLPN 2094
            N I+  L      +    +  PDK  R EIL  + T  + L   +DL  L   T+G+   
Sbjct: 297  NAIDPALRRPGRFDREIEVPLPDKHGRLEILQIH-TRHMPLAEDMDLEKLAEMTKGFTGA 355

Query: 2095 DLKILSDRI----YHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEKALAGYTPSNLRGVKL 2262
            DL  L+           L                          KAL   TPS LR +++
Sbjct: 356  DLAALAREAAMYALRRYLPEIDLDQESIPVEVLEKMVVTMEDFLKALREITPSGLREIQI 415

Query: 2263 QKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLAS 2442
            +   + WSDIGGL++ K  L E +EWP K+   F    +R   G+LL+G PG GKTLLA 
Sbjct: 416  EVPEVRWSDIGGLEDVKQELREVVEWPLKHPEAFTRMGIRPPRGVLLFGPPGTGKTLLAK 475

Query: 2443 AIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHD 2622
            A+A + G NFI+++GPEIL+K++G SE+++RE+F +A+   P ++FFDE D+IAP RG D
Sbjct: 476  AVATESGANFIAVRGPEILSKWVGESERAIREIFAKARQHAPAVVFFDEIDAIAPVRGTD 535

Query: 2623 -STGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYE 2799
              T VT+R+V+Q+LT++DG   L  V V+AAT+RPD++D AL+RPGRL+K +    P++ 
Sbjct: 536  VGTRVTERIVSQLLTEIDGVSDLHDVVVIAATNRPDMVDPALMRPGRLEKMIYVPPPDFS 595

Query: 2800 DRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVH--VTLEELSQR 2973
             RL+IL+  T K+ L++DV+L EIA +T G++GAD++ L   A L A+   +   E+S R
Sbjct: 596  SRLEILRIHTRKVPLAEDVDLAEIARRTEGYTGADIEALVREASLAALREDINAAEVSMR 655



 Score =  199 bits (507), Expect = 1e-49
 Identities = 108/230 (46%), Positives = 144/230 (62%)
 Frame = +1

Query: 2275 INWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAG 2454
            + + DIGGLKE    + E +E P ++  IF    +    GILLYG PG GKTLLA A+A 
Sbjct: 147  VTYEDIGGLKEVIEKVREMVELPLRHPEIFKRLGIEPPKGILLYGPPGTGKTLLAKAVAN 206

Query: 2455 QCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV 2634
            +    FISI GPEI++KY G SEQ +RE+FE A+   P I+F DE D+IAPKR      V
Sbjct: 207  EADAYFISINGPEIMSKYYGESEQRLREIFEEAKKNAPSIIFIDEIDAIAPKRDEVVGEV 266

Query: 2635 TDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDI 2814
              RVV Q+L  MDG E    V V+AAT+RP+ ID AL RPGR D+ +   +P+   RL+I
Sbjct: 267  ERRVVAQLLALMDGLEARGNVIVIAATNRPNAIDPALRRPGRFDREIEVPLPDKHGRLEI 326

Query: 2815 LQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEEL 2964
            LQ  T  M L++D++L ++AE T GF+GAD+  L   A + A+   L E+
Sbjct: 327  LQIHTRHMPLAEDMDLEKLAEMTKGFTGADLAALAREAAMYALRRYLPEI 376


>Q976H7|ST0209|Q976H7 (TrEMBL: Sulfolobus tokodaii) Putative SAV
            protein.
          Length = 689

 Score =  263 bits (671), Expect = 1e-68
 Identities = 168/481 (34%), Positives = 256/481 (53%), Gaps = 9/481 (1%)
 Frame = +1

Query: 1558 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 1737
            G L+YG  G GKTLL K VA   N+   YFT  I+   IM++ F   S+    +  +   
Sbjct: 148  GILLYGPPGVGKTLLAKAVA---NETEAYFTS-INGPEIMSK-FYGESEQRLREIFEDAK 202

Query: 1738 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKD 1917
             + P+++ +D ID +     E +   +   + +     LT +                + 
Sbjct: 203  KHAPAIIFIDEIDAIAPKRDEVIGEVERRVVAQL----LTLMDGLESRGNVIVIAATNRP 258

Query: 1918 N-INKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLPN 2094
            N ++  L      +    +  PDK  R EIL  + T  + L   VDL  L   T GY   
Sbjct: 259  NAVDPALRRPGRFDREIEIPLPDKQGRLEILQIH-TRNMPLSKDVDLEKLAEMTHGYTGA 317

Query: 2095 DLKIL-------SDRIYHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEKALAGYTPSNLRG 2253
            DL  L       + R Y +V+                          KA     PS LR 
Sbjct: 318  DLSALVREAAMNALRRYLQVI---DLNQDKIPPEILEKMEVNMDDFLKAFKEIVPSGLRE 374

Query: 2254 VKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTL 2433
            + ++   ++WSDIGGL++ K  L E +E+P KY   + N  +    GILL+G PG GKT+
Sbjct: 375  IYVEVPEVHWSDIGGLEDVKEELREVVEYPLKYREAYENVGIEPPKGILLFGPPGTGKTM 434

Query: 2434 LASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKR 2613
            LA A+A + G NFI+++GPEIL+K++G SE+++RE+F +A+ A P ++FFDE D+IAP R
Sbjct: 435  LAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDAIAPMR 494

Query: 2614 G-HDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMP 2790
            G    +GVT+R+VNQ+L +MDG E L+ V ++AAT+RPD++D ALLRPGR D+ +    P
Sbjct: 495  GLTTDSGVTERIVNQLLAEMDGIEKLENVVIIAATNRPDILDPALLRPGRFDRLIYVPPP 554

Query: 2791 NYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEELSQ 2970
            +   R +IL+  T  + L++D+ L E+AEKT G++GAD+  L   A L+A+   + E  +
Sbjct: 555  DKRARAEILKVHTRNVPLAEDITLDELAEKTEGYTGADLAALVREATLRAIREEMTECMK 614

Query: 2971 R 2973
            +
Sbjct: 615  K 615



 Score =  193 bits (491), Expect = 1e-47
 Identities = 104/228 (45%), Positives = 142/228 (62%)
 Frame = +1

Query: 2275 INWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAG 2454
            + + DIGG+K     + E +E P K+  +F    +    GILLYG PG GKTLLA A+A 
Sbjct: 109  VTYEDIGGMKHIIQKIRELVELPLKHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAVAN 168

Query: 2455 QCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV 2634
            +    F SI GPEI++K+ G SEQ +RE+FE A+   P I+F DE D+IAPKR      V
Sbjct: 169  ETEAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEIDAIAPKRDEVIGEV 228

Query: 2635 TDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDI 2814
              RVV Q+LT MDG E    V V+AAT+RP+ +D AL RPGR D+ +   +P+ + RL+I
Sbjct: 229  ERRVVAQLLTLMDGLESRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPLPDKQGRLEI 288

Query: 2815 LQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLE 2958
            LQ  T  M LS DV+L ++AE T G++GAD+  L   A + A+   L+
Sbjct: 289  LQIHTRNMPLSKDVDLEKLAEMTHGYTGADLSALVREAAMNALRRYLQ 336


>P54609|CDC48A|C48A_ARATH (SP: Arabidopsis thaliana (Mouse-ear cress))
            Cell division control protein 48 homolog A (AtCDC48a).
          Length = 809

 Score =  263 bits (671), Expect = 1e-68
 Identities = 191/685 (27%), Positives = 324/685 (47%), Gaps = 58/685 (8%)
 Frame = +1

Query: 1081 NQIGNIISLKPAIKNLPKRPTTFTIHPYIIHTKKKEITI----------SSNKKENKLAQ 1230
            N   +++SL PA     ++   F     +I  KK++ T+              + NK+ +
Sbjct: 37   NDDNSVVSLHPATM---EKLQLFRGDTILIKGKKRKDTVCIALADETCEEPKIRMNKVVR 93

Query: 1231 QLTEIMYPGIASIPITNFTKIPIIANVLPYGGLLRFRKNDEYNAWIKPYNLDLKKPIK-- 1404
                +    + S+      K     ++LP    +     + ++A++KPY L+  +P++  
Sbjct: 94   SNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKG 153

Query: 1405 -------------FEIGDE------ILRPSSFIEQEIDKPTTNDTEEQEAIGLDNT---- 1515
                         F++ +       ++ P + I  E +     D E  + +G D+     
Sbjct: 154  DLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLDDVGYDDVGGVR 213

Query: 1516 -----VEDIVD----------SFITSDNTGTLVYGNSGSGKTLLLKLVAQQLNQQHGYFT 1650
                 + ++V+          S       G L+YG  GSGKTL+ + VA +     G F 
Sbjct: 214  KQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET----GAFF 269

Query: 1651 KYISCDTIMNENFQNLSKNHFFKWIQTCAWNKPSVLILDNIDKLMSVEMENMDATKSNQL 1830
              I+   IM++     S+++  K  +    N PS++ +D ID + + + E  +     ++
Sbjct: 270  FCINGPEIMSK-LAGESESNLRKAFEEAEKNAPSIIFIDEIDSI-APKREKTNGEVERRI 327

Query: 1831 TEFFISNLTKIHHQXXXXXXXXXXXXXKDNINKLLLGSHLIENFHHLNPPDKSLRFEILD 2010
                ++ +  +  +              ++I+  L      +    +  PD+  R E+L 
Sbjct: 328  VSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL- 384

Query: 2011 KYLTNKLGLKIKVDLMDLVSETEGYLPNDLKILSD----RIYHEVLFXXXXXXXXXXXXX 2178
            +  T  + L   VDL  +  +T GY+  DL  L      +   E +              
Sbjct: 385  RIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEI 444

Query: 2179 XXXXXXXXXHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAP 2358
                     H   AL    PS LR   ++  +++W+DIGGL+  K  L ET+++P ++  
Sbjct: 445  LNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPE 504

Query: 2359 IFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRE 2538
             F    +    G+L YG PGCGKTLLA AIA +C  NFIS+KGPE+L  + G SE +VRE
Sbjct: 505  KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564

Query: 2539 LFERAQAAKPCILFFDEFDSIAPKR----GHDSTGVTDRVVNQMLTQMDGAEGLDGVYVL 2706
            +F++A+ + PC+LFFDE DSIA +R    G D  G  DRV+NQ+LT+MDG      V+++
Sbjct: 565  IFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFII 624

Query: 2707 AATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTT 2886
             AT+RPD+IDSALLRPGRLD+ +   +P+ + RL+I ++   K  ++ DV++  +A+ T 
Sbjct: 625  GATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQ 684

Query: 2887 GFSGADMQGLGYNAYLKAVHVTLEE 2961
            GFSGAD+  +   A   A+   +E+
Sbjct: 685  GFSGADITEICQRACKYAIRENIEK 709


>Q9LZF6|CDC48E|C48E_ARATH (SP: Arabidopsis thaliana (Mouse-ear cress))
            Cell division control protein 48 homolog E (AtCDC48e)
            (Transitional endoplasmic reticulum ATPase E).
          Length = 810

 Score =  262 bits (670), Expect = 2e-68
 Identities = 181/629 (28%), Positives = 305/629 (48%), Gaps = 47/629 (7%)
 Frame = +1

Query: 1216 NKLAQQLTEIMYPGIASIPITNFTKIPIIANVLPYGGLLRFRKNDEYNAWIKPYNLDLKK 1395
            NK+ +    +    + S+      K     ++LP    +     + ++A++KPY L+  +
Sbjct: 89   NKVVRSNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAYLKPYFLEAYR 148

Query: 1396 PIK---------------FEIGDE------ILRPSSFIEQEIDKPTTNDTEEQEAIGLDN 1512
            P++               F++ +       ++ P + I  E +     D E  + +G D+
Sbjct: 149  PVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDD 208

Query: 1513 T---------VEDIVD----------SFITSDNTGTLVYGNSGSGKTLLLKLVAQQLNQQ 1635
                      + ++V+          S       G L+YG  GSGKTL+ + VA +    
Sbjct: 209  VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET--- 265

Query: 1636 HGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWNKPSVLILDNIDKLMSVEMENMDAT 1815
             G F   I+   IM++     S+++  K  +    N PS++ +D ID + + + E  +  
Sbjct: 266  -GAFFFCINGPEIMSK-LAGESESNLRKAFEEAEKNAPSIIFIDEIDSI-APKREKTNGE 322

Query: 1816 KSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKDNINKLLLGSHLIENFHHLNPPDKSLR 1995
               ++    ++ +  +  +              ++I+  L      +    +  PD+  R
Sbjct: 323  VERRIVSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 380

Query: 1996 FEILDKYLTNKLGLKIKVDLMDLVSETEGYLPNDLKILSD----RIYHEVLFXXXXXXXX 2163
             E+L +  T  + L   VDL  +  +T GY+  DL  L      +   E +         
Sbjct: 381  LEVL-RIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDS 439

Query: 2164 XXXXXXXXXXXXXXHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETLEWP 2343
                          H   AL    PS LR   ++  +++W DIGGL+  K  L ET+++P
Sbjct: 440  IDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYP 499

Query: 2344 TKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASE 2523
             ++   F    +    G+L YG PGCGKTLLA AIA +C  NFIS+KGPE+L  + G SE
Sbjct: 500  VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 559

Query: 2524 QSVRELFERAQAAKPCILFFDEFDSIAPKRGH---DSTGVTDRVVNQMLTQMDGAEGLDG 2694
             +VRE+F++A+ + PC+LFFDE DSIA +RG+   D+ G  DRV+NQ+LT+MDG      
Sbjct: 560  ANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKT 619

Query: 2695 VYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIA 2874
            V+++ AT+RPD+IDSALLRPGRLD+ +   +P+ + RL+I ++   K  ++ DV++  +A
Sbjct: 620  VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALA 679

Query: 2875 EKTTGFSGADMQGLGYNAYLKAVHVTLEE 2961
            + T GFSGAD+  +   A   A+   +E+
Sbjct: 680  KYTQGFSGADITEICQRACKYAIRENIEK 708


>Q975P4|ST0376|Q975P4 (TrEMBL: Sulfolobus tokodaii) Putative SAV
            protein.
          Length = 747

 Score =  262 bits (670), Expect = 2e-68
 Identities = 177/581 (30%), Positives = 291/581 (50%), Gaps = 7/581 (1%)
 Frame = +1

Query: 1558 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 1737
            G L+YG  G+GKTLL + +A ++     ++T  I+   IM++ F   S+    +  +   
Sbjct: 215  GILLYGPPGNGKTLLARALANEVGAS--FYT--INGPEIMSK-FYGESEQRLREIFEEAQ 269

Query: 1738 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKD 1917
             N P+++ +D ID + + + E +      ++    ++ +  I  +              D
Sbjct: 270  KNAPAIIFIDEIDSI-APKREEVTGEVEKRVVAQLLTLMDGI--KGRGKVIVIGATNRPD 326

Query: 1918 NINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLPND 2097
             ++  L      +    + PPD   R EIL  + T  + L   VDL  L   T GY   D
Sbjct: 327  AVDPALRRPGRFDREIEIRPPDTKGRKEILQVH-TRNMPLAEDVDLDKLAEITYGYTGAD 385

Query: 2098 LKILSDRIYHEVLFXXXXXXXXXX------XXXXXXXXXXXXHIEKALAGYTPSNLRGVK 2259
            L  L+       L                                +A+    P+ LR V 
Sbjct: 386  LAALAKEAAMNALRRFIAEKKINLEQERIPAEILKELKVTMQDFLEAMKSIQPTLLREVY 445

Query: 2260 LQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLA 2439
            ++   ++W+DIGGL+E K  L E +EWP +++ +F    +    GILL+G PG GKT+LA
Sbjct: 446  VEVPKVHWNDIGGLEEVKQQLREAVEWPLRFSELFNKSGITPPKGILLFGPPGTGKTMLA 505

Query: 2440 SAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRG- 2616
             A+A + G NFI+++GPEIL+K++G SE+++RE+F +A+ A P I+FFDE D+IAP RG 
Sbjct: 506  KAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTIIFFDEIDAIAPMRGL 565

Query: 2617 HDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNY 2796
               +GVT+R+VNQ+L +MDG   L+ V V+AAT+RPD++D ALLRPGR D+ +    P+ 
Sbjct: 566  TTDSGVTERIVNQLLAEMDGIVPLNKVVVIAATNRPDILDPALLRPGRFDRLIYVPPPDK 625

Query: 2797 EDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEELSQRX 2976
              R +IL+  T  + L++D+ L E+AEKT G++GAD++ L   A + A+     +     
Sbjct: 626  RARAEILKVHTRNVPLAEDITLDELAEKTEGYTGADIEALVREATINAMRKIFND----- 680

Query: 2977 XXXXXXXXXXXXXXXXSIEFFQVGNSEKKLKTNEKIQLLHQIQQFMNPNKDNSDSERKAG 3156
                                      +KK K               +  ++N D      
Sbjct: 681  -------------------------CDKKAK---------------DQCQNNVDCYNSKM 700

Query: 3157 QDAMNKSKVLITHENFLESLKETKPSISHSEKIKLTKIYKE 3279
            +D MN +KV++T E+F ++L+  KPS++ ++  +  ++ KE
Sbjct: 701  RDCMNNAKVIVTKEDFNKALEVVKPSLTAADIQRYERLAKE 741



 Score =  206 bits (523), Expect = 2e-51
 Identities = 107/229 (46%), Positives = 147/229 (64%)
 Frame = +1

Query: 2275 INWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAG 2454
            + W DIG L+EAK  + E +EWP ++  +F    +    GILLYG PG GKTLLA A+A 
Sbjct: 176  VTWEDIGDLEEAKQKIREIVEWPLRHPELFQRLGIEPPKGILLYGPPGNGKTLLARALAN 235

Query: 2455 QCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV 2634
            + G +F +I GPEI++K+ G SEQ +RE+FE AQ   P I+F DE DSIAPKR   +  V
Sbjct: 236  EVGASFYTINGPEIMSKFYGESEQRLREIFEEAQKNAPAIIFIDEIDSIAPKREEVTGEV 295

Query: 2635 TDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDI 2814
              RVV Q+LT MDG +G   V V+ AT+RPD +D AL RPGR D+ +    P+ + R +I
Sbjct: 296  EKRVVAQLLTLMDGIKGRGKVIVIGATNRPDAVDPALRRPGRFDREIEIRPPDTKGRKEI 355

Query: 2815 LQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEE 2961
            LQ  T  M L++DV+L ++AE T G++GAD+  L   A + A+   + E
Sbjct: 356  LQVHTRNMPLAEDVDLDKLAEITYGYTGADLAALAKEAAMNALRRFIAE 404


>P90532|CDCD|P90532 (TrEMBL: Dictyostelium discoideum (Slime mold))
            Cell division cycle protein 48.
          Length = 793

 Score =  262 bits (669), Expect = 2e-68
 Identities = 185/638 (28%), Positives = 306/638 (47%), Gaps = 48/638 (7%)
 Frame = +1

Query: 1192 TISSNK-KENKLAQQLTEIMYPGIASIPITNFTKIPIIANVLPYGGLLRFRKNDEYNAWI 1368
            TI  +K + NK+ +    +    + S+   +  K     +VLP    +     + ++ ++
Sbjct: 75   TIDPSKIRMNKVVRNNLRVRLGDMISVHQCSDVKYGKRIHVLPIDDTIEGLSGNLFDLYL 134

Query: 1369 KPYNLDLKKPIK---------------FEIGDE------ILRPSSFIEQEIDKPTTNDTE 1485
            KPY L+  +P++               F++ +       I+ P +FI  E +     D +
Sbjct: 135  KPYFLEAYRPVRKGDLFLVRGGMRAVEFKVVETDPGEYCIVAPETFIHCEGEAVKREDED 194

Query: 1486 EQEAIGLDNT---------VEDIVD----------SFITSDNTGTLVYGNSGSGKTLLLK 1608
              + +G D+          + ++V+          +       G L+YG  G GKT++ +
Sbjct: 195  RLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIAR 254

Query: 1609 LVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWNKPSVLILDNIDKLMS 1788
             VA +     G F   I+   IM++     S+++  K  +    N PS++ +D ID + +
Sbjct: 255  AVANET----GAFFFLINGPEIMSK-LAGESESNLRKAFEEAEKNAPSIIFIDEIDSI-A 308

Query: 1789 VEMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKDNINKLLLGSHLIENFHH 1968
             + E        ++    ++ +  +  +              ++I+  L      +    
Sbjct: 309  PKREKTQGEVERRIVSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREID 366

Query: 1969 LNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLPNDLKILSD----RIYHEVL 2136
            +  PD + R EI+ +  T  + L   VDL  + +ET GY+  DL  L      +   E +
Sbjct: 367  ITIPDATGRLEIM-RIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKM 425

Query: 2137 FXXXXXXXXXXXXXXXXXXXXXXHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKN 2316
                                   H   AL    PS LR   ++  +  W DIGGL+  K 
Sbjct: 426  DVIDLEDETISAEILESMSVTQDHFRTALTLSNPSALRETVVEVPTTTWEDIGGLEGVKR 485

Query: 2317 ILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEI 2496
             L ET+++P ++   F    ++   G+L YG PGCGKTLLA AIA +C  NFISIKGPE+
Sbjct: 486  ELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 545

Query: 2497 LNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGH---DSTGVTDRVVNQMLTQ 2667
            L  + G SE +VRELF++A+ A PC+LFFDE DSIA  RG    D+ G  DRV+NQ+LT+
Sbjct: 546  LTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVINQILTE 605

Query: 2668 MDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKMDLS 2847
            MDG      V+++ AT+RPD+ID A+LRPGRLD+ +   +P+   R+ IL++   K  ++
Sbjct: 606  MDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKACLNKSPVA 665

Query: 2848 DDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEE 2961
             DV+L  + +KT GFSGAD+  +   A   A+  ++E+
Sbjct: 666  KDVDLEFLGQKTQGFSGADLTEICQRACKLAIRESIEK 703


>Q96372|CAFP|CC48_CAPAN (SP: Capsicum annuum (Bell pepper)) Cell
            division cycle protein 48 homolog.
          Length = 805

 Score =  262 bits (669), Expect = 2e-68
 Identities = 192/688 (27%), Positives = 323/688 (46%), Gaps = 57/688 (8%)
 Frame = +1

Query: 1081 NQIGNIISLKPAIKNLPKRPTTFTIHPYIIHTKKKEITI----------SSNKKENKLAQ 1230
            N   ++++L PA     ++   F     +I  KK++ T+              + NK+ +
Sbjct: 38   NDDNSVVALHPATM---EKLQLFRGDTILIKGKKRKDTVVIALADETCDEPKIRMNKVVR 94

Query: 1231 QLTEIMYPGIASIPITNFTKIPIIANVLPYGGLLRFRKNDEYNAWIKPYNLDLKKPIK-- 1404
                +    + S+      K     ++LP    +     D ++A++KPY L+  +P++  
Sbjct: 95   SNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGLTGDLFDAFLKPYFLEAYRPLRKG 154

Query: 1405 -------------FEIGDE------ILRPSSFIEQEIDKPTTNDTEEQEAIGLDNT---- 1515
                         F++ +       ++ P + I  E +     D E  + +G D+     
Sbjct: 155  DNFLVRGGMRSVEFKVIETDPGEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVR 214

Query: 1516 -----VEDIVD----------SFITSDNTGTLVYGNSGSGKTLLLKLVAQQLNQQHGYFT 1650
                 + ++V+          S       G L+YG  GSGKTL+ + VA +     G F 
Sbjct: 215  KQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET----GAFF 270

Query: 1651 KYISCDTIMNENFQNLSKNHFFKWIQTCAWNKPSVLILDNIDKLMSVEMENMDATKSNQL 1830
              I+   IM++     S+++  K  +    N PS++ +D ID + + + E        ++
Sbjct: 271  FCINGPEIMSK-LAGESESNLRKAFEEAEKNAPSIIFIDEIDSI-APKREKTHGEVERRI 328

Query: 1831 TEFFISNLTKIHHQXXXXXXXXXXXXXKDNINKLLLGSHLIENFHHLNPPDKSLRFEILD 2010
                ++ +  +  +              ++I+  L      +    +  PD+  R E+L 
Sbjct: 329  VSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLG 386

Query: 2011 KYLTNKLGLKIKVDLMDLVSETEGYLPNDLKILSD----RIYHEVLFXXXXXXXXXXXXX 2178
             + T  + L  +VDL  +  +T GY+  DL  L      +   E +              
Sbjct: 387  IH-TKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVLDLEDDTIDAEV 445

Query: 2179 XXXXXXXXXHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAP 2358
                     H + AL    PS LR   ++  +++W DIGGL+  K  L ET+++P +   
Sbjct: 446  LNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEPPE 505

Query: 2359 IFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRE 2538
             F    +    G+L YG PGCGKTLLA AIA +C  NFIS+KGPE+L  + G SE +VRE
Sbjct: 506  KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 565

Query: 2539 LFERAQAAKPCILFFDEFDSIAPKRGH---DSTGVTDRVVNQMLTQMDGAEGLDGVYVLA 2709
            +F++A+ + PC+LFFDE DSIA +RG    D+ G  DRV+NQ+LT+MDG      V+++ 
Sbjct: 566  IFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 625

Query: 2710 ATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTTG 2889
            AT+RPD+ID ALLRPGRLD+ +   +P+ + R  I ++   K  LS D++L  +A+ T G
Sbjct: 626  ATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQG 685

Query: 2890 FSGADMQGLGYNAYLKAVHVTLEELSQR 2973
            FSGAD+  +   A   A+   +E+  +R
Sbjct: 686  FSGADVTEICQRACKYAIRENIEKDIER 713


>Q877G7|SAV2|Q877G7 (TrEMBL: Sulfolobus acidocaldarius) AAA family
            ATPase.
          Length = 773

 Score =  261 bits (668), Expect = 3e-68
 Identities = 167/474 (35%), Positives = 249/474 (52%), Gaps = 6/474 (1%)
 Frame = +1

Query: 1558 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 1737
            G L+YG  G GKTLL K VA   N+   YFT  I+   IM++ F   S+    +  +   
Sbjct: 232  GILLYGPPGVGKTLLAKAVA---NETDAYFTS-INGPEIMSK-FYGESEQRLREIFEDAK 286

Query: 1738 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKD 1917
             + P+++ +D ID +     E +   +   + +     LT +                + 
Sbjct: 287  KHAPAIIFIDEIDAIAPKRDEVIGEVERRVVAQL----LTLMDGLENRGNVIVIAATNRP 342

Query: 1918 N-INKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLPN 2094
            N ++  L      +    +  PDK  R EIL  + T  + L   VDL  L   T GY   
Sbjct: 343  NAVDPALRRPGRFDREIEIPLPDKQGRLEILQIH-TRNMPLSKDVDLHKLAEMTHGYTGA 401

Query: 2095 DLKILSDRIYHEVLFXXXXXXXXXXXXX----XXXXXXXXXHIEKALAGYTPSNLRGVKL 2262
            DL  L        L                              KA     PS LR + +
Sbjct: 402  DLSALVREAAMNALRRYIQMIDLSQDKIPPEILEKMEVRMDDFLKAFKDIVPSGLREIYI 461

Query: 2263 QKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLAS 2442
            +   ++W DIGGL+E K  L E +E+P KY  ++ N  +    GILL+G PG GKT+LA 
Sbjct: 462  EVPEVHWFDIGGLEEVKEELREVVEYPLKYREVYENMSIEPPKGILLFGPPGTGKTMLAK 521

Query: 2443 AIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRG-H 2619
            A+A + G NFI+++GPEIL+K++G SE+++RE+F +A+ A P ++FFDE DSIAP RG  
Sbjct: 522  AVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLS 581

Query: 2620 DSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYE 2799
              +GVT+R+VNQ+L +MDG E L+ V V+AAT+RPD++D ALLRPGR D+ +    P+  
Sbjct: 582  TDSGVTERIVNQLLAEMDGIEKLENVVVIAATNRPDILDPALLRPGRFDRLIYVPPPDKT 641

Query: 2800 DRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEE 2961
             R +IL+  T  + L++DV+L +IAEK  G++GAD+  +   A L+A+   + E
Sbjct: 642  ARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLAAVVREAALRAIREQMAE 695



 Score =  199 bits (506), Expect = 2e-49
 Identities = 107/234 (45%), Positives = 149/234 (63%), Gaps = 2/234 (0%)
 Frame = +1

Query: 2275 INWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAG 2454
            + + DIGG+KE    + E +E P ++  +F    +    GILLYG PG GKTLLA A+A 
Sbjct: 193  VTYEDIGGMKEIIQKIRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAVAN 252

Query: 2455 QCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV 2634
            +    F SI GPEI++K+ G SEQ +RE+FE A+   P I+F DE D+IAPKR      V
Sbjct: 253  ETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEIDAIAPKRDEVIGEV 312

Query: 2635 TDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDI 2814
              RVV Q+LT MDG E    V V+AAT+RP+ +D AL RPGR D+ +   +P+ + RL+I
Sbjct: 313  ERRVVAQLLTLMDGLENRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPLPDKQGRLEI 372

Query: 2815 LQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAV--HVTLEELSQ 2970
            LQ  T  M LS DV+LH++AE T G++GAD+  L   A + A+  ++ + +LSQ
Sbjct: 373  LQIHTRNMPLSKDVDLHKLAEMTHGYTGADLSALVREAAMNALRRYIQMIDLSQ 426



 Score = 50.1 bits (118), Expect = 2e-04
 Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 2/208 (0%)
 Frame = +1

Query: 1483 EEQEAIGLDNTVEDIVDSFITSDNTGTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYIS 1662
            E +E +       ++ ++       G L++G  G+GKT+L K VA +     G     + 
Sbjct: 480  ELREVVEYPLKYREVYENMSIEPPKGILLFGPPGTGKTMLAKAVATE----SGANFIAVR 535

Query: 1663 CDTIMNENFQNLSK--NHFFKWIQTCAWNKPSVLILDNIDKLMSVEMENMDATKSNQLTE 1836
               I+++      K     F+  +  A   P+V+  D ID +  +   + D+  + ++  
Sbjct: 536  GPEILSKWVGESEKAIREIFRKARQAA---PTVIFFDEIDSIAPIRGLSTDSGVTERIVN 592

Query: 1837 FFISNLTKIHHQXXXXXXXXXXXXXKDNINKLLLGSHLIENFHHLNPPDKSLRFEILDKY 2016
              ++ +  I  +              D ++  LL     +   ++ PPDK+ RFEIL K 
Sbjct: 593  QLLAEMDGI--EKLENVVVIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEIL-KV 649

Query: 2017 LTNKLGLKIKVDLMDLVSETEGYLPNDL 2100
             T  + L   V L D+  + EGY   DL
Sbjct: 650  HTKNVPLAEDVSLEDIAEKAEGYTGADL 677


>Q9SCN8|CDC48D|C48D_ARATH (SP: Arabidopsis thaliana (Mouse-ear cress))
            Putative cell division control protein 48 homolog D
            (AtCDC48d) (Transitional endoplasmic reticulum ATPase D).
          Length = 815

 Score =  261 bits (667), Expect = 4e-68
 Identities = 182/629 (28%), Positives = 302/629 (48%), Gaps = 47/629 (7%)
 Frame = +1

Query: 1216 NKLAQQLTEIMYPGIASIPITNFTKIPIIANVLPYGGLLRFRKNDEYNAWIKPYNLDLKK 1395
            NK+ +    +    + S+      K     ++LP    +     + ++A++KPY L+  +
Sbjct: 90   NKVVRSNLRVRLGDVISVHQCPDVKYGNRVHILPLDDTIEGVSGNIFDAYLKPYFLEAYR 149

Query: 1396 PIK---------------FEIGDE------ILRPSSFIEQEIDKPTTNDTEEQEAIGLDN 1512
            P++               F++ +       ++ P + I  E +     D E  + +G D+
Sbjct: 150  PVRKGDLFLVRGGMRSIEFKVIETDPAEYCVVAPDTEIFCEGEPIKREDEERLDEVGYDD 209

Query: 1513 T---------VEDIVD----------SFITSDNTGTLVYGNSGSGKTLLLKLVAQQLNQQ 1635
                      + ++V+          S       G L+YG  GSGKTL+ + VA +    
Sbjct: 210  VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET--- 266

Query: 1636 HGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWNKPSVLILDNIDKLMSVEMENMDAT 1815
             G F   I+   IM++     S+++  K  +    N PS++ +D ID + + + E     
Sbjct: 267  -GAFFFCINGPEIMSK-LAGESESNLRKAFEEAEKNAPSIIFIDEIDSI-APKREKTHGE 323

Query: 1816 KSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKDNINKLLLGSHLIENFHHLNPPDKSLR 1995
               ++    ++ +  +  +              ++I+  L      +    +  PD+  R
Sbjct: 324  VERRIVSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 381

Query: 1996 FEILDKYLTNKLGLKIKVDLMDLVSETEGYLPNDLKILSD----RIYHEVLFXXXXXXXX 2163
             E+L +  T  + L   VDL  +  +T GY+  DL  L      +   E +         
Sbjct: 382  LEVL-RIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEE 440

Query: 2164 XXXXXXXXXXXXXXHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETLEWP 2343
                          H + AL    PS LR   ++  +++W DIGGL+  K  L ET+++P
Sbjct: 441  IDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYP 500

Query: 2344 TKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASE 2523
             ++   F    +    G+L YG PGCGKTLLA AIA +C  NFISIKGPE+L  + G SE
Sbjct: 501  VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 560

Query: 2524 QSVRELFERAQAAKPCILFFDEFDSIAPKRGH---DSTGVTDRVVNQMLTQMDGAEGLDG 2694
             +VRE+F++A+ + PC+LFFDE DSIA +RG+   D+ G  DRV+NQ+LT+MDG      
Sbjct: 561  ANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKT 620

Query: 2695 VYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIA 2874
            V+++ AT+RPD+ID ALLRPGRLD+ +   +P+ E R  I +S   K  ++ DV+L  +A
Sbjct: 621  VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALA 680

Query: 2875 EKTTGFSGADMQGLGYNAYLKAVHVTLEE 2961
            + T GFSGAD+  +   +   A+   +E+
Sbjct: 681  KYTQGFSGADITEICQRSCKYAIRENIEK 709


>O60058|SPBC56F2.07C|O60058 (TrEMBL: Schizosaccharomyces pombe
            (Fission yeast)) AAA family ATPase.
          Length = 809

 Score =  259 bits (663), Expect = 1e-67
 Identities = 160/468 (34%), Positives = 251/468 (53%), Gaps = 1/468 (0%)
 Frame = +1

Query: 1558 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 1737
            G L+YG  G+GKT++++ VA + N Q   FT  I   +++ + +   +++   K  +   
Sbjct: 315  GVLLYGPPGTGKTMVMRAVAAEANAQ--VFT--IDGPSVVGK-YLGETESRLRKIFEDAR 369

Query: 1738 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKD 1917
             ++PS++ +D ID L     E++   +S  +       LT +                + 
Sbjct: 370  AHQPSIIFIDEIDALAPKRTEDVSEAESRAVATL----LTLLDGMANAGKVVVIAATNRP 425

Query: 1918 N-INKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLPN 2094
            N I++ L     +E    +  PDKS R +I+   L+          L DL S T  Y+  
Sbjct: 426  NSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGA 485

Query: 2095 DLKILSDRIYHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEKALAGYTPSNLRGVKLQKSS 2274
            DL  +        +                        +E AL+    S +R   ++  +
Sbjct: 486  DLAAVVREAALRAI-KRTISLQKDTSGLDIFGAVQMDDLEFALSSVRQSAMREFMMESPN 544

Query: 2275 INWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAG 2454
            ++WSDIGG +E K  L E++EWP  +   F+   +R   G+LLYG PGC KT+ A AIA 
Sbjct: 545  VHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIAT 604

Query: 2455 QCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV 2634
            + GLNFI++KGPE+ +K++G SE++VR++F++A+ A P ++FFDE D++   RG D++  
Sbjct: 605  ETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRGEDNS-- 662

Query: 2635 TDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDI 2814
            +DRVV  +L ++DG E L  V VLAAT+RPD+ID AL+RPGRLD+ +    PN+E R  I
Sbjct: 663  SDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQI 722

Query: 2815 LQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLE 2958
            ++    KM  ++DV+L  IAEKT G SGA++  L   A L A+H  LE
Sbjct: 723  VKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLE 770



 Score =  156 bits (394), Expect = 2e-36
 Identities = 83/230 (36%), Positives = 137/230 (59%), Gaps = 1/230 (0%)
 Frame = +1

Query: 2269 SSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAI 2448
            S++ +S IGGL+     + + +E P +   +F    +    G+LLYG PG GKT++  A+
Sbjct: 274  SAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAV 333

Query: 2449 AGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDST 2628
            A +      +I GP ++ KY+G +E  +R++FE A+A +P I+F DE D++APKR  D +
Sbjct: 334  AAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVS 393

Query: 2629 GVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRL 2808
                R V  +LT +DG      V V+AAT+RP+ ID AL RPGRL+K +   +P+   RL
Sbjct: 394  EAESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARL 453

Query: 2809 DILQSITTKM-DLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTL 2955
            DI++ + + + +  +D  L ++A +T  + GAD+  +   A L+A+  T+
Sbjct: 454  DIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTI 503


>P54774|CDC48|CC48_SOYBN (SP: Glycine max (Soybean)) Cell division
            cycle protein 48 homolog (Valosin containing protein
            homolog) (VCP).
          Length = 807

 Score =  258 bits (659), Expect = 3e-67
 Identities = 180/633 (28%), Positives = 302/633 (47%), Gaps = 47/633 (7%)
 Frame = +1

Query: 1216 NKLAQQLTEIMYPGIASIPITNFTKIPIIANVLPYGGLLRFRKNDEYNAWIKPYNLDLKK 1395
            NK+ +    +    + S+      K     ++LP    +     + ++A++KPY L+  +
Sbjct: 90   NKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAFLKPYFLEAYR 149

Query: 1396 PIK---------------FEIGDE------ILRPSSFIEQEIDKPTTNDTEEQEAIGLDN 1512
            P++               F++ +       ++ P + I  E +     D E  + +G D+
Sbjct: 150  PVRKGDLFLVRGGMRSVEFKVVETDPGEYCVVAPDTEIFCEGEPLKREDEERLDEVGYDD 209

Query: 1513 T---------VEDIVD----------SFITSDNTGTLVYGNSGSGKTLLLKLVAQQLNQQ 1635
                      + ++V+          S       G L+YG  GSGKTL+ + VA +    
Sbjct: 210  VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET--- 266

Query: 1636 HGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWNKPSVLILDNIDKLMSVEMENMDAT 1815
             G F   I+   IM++     S+++  K  +    N PS++ +D ID + + + E     
Sbjct: 267  -GAFFFCINGPEIMSK-LAGESESNLRKAFEEAEKNAPSIIFIDEIDSI-APKREKTHGE 323

Query: 1816 KSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKDNINKLLLGSHLIENFHHLNPPDKSLR 1995
               ++    ++ +  +  +              ++I+  L      +    +  PD+  R
Sbjct: 324  VERRIVSQLLTLMDGL--KSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 1996 FEILDKYLTNKLGLKIKVDLMDLVSETEGYLPNDLKILSD----RIYHEVLFXXXXXXXX 2163
             E+L +  T  + L   VDL  +  +T GY+  DL  L      +   E +         
Sbjct: 382  LEVL-RIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDET 440

Query: 2164 XXXXXXXXXXXXXXHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETLEWP 2343
                          H + AL    PS LR   ++  +++W DIGGL+  K  L ET+++P
Sbjct: 441  IDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYP 500

Query: 2344 TKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASE 2523
             ++   F    +    G+L YG PGCGKTLLA AIA +C  NFIS+KGPE+L  + G SE
Sbjct: 501  VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 560

Query: 2524 QSVRELFERAQAAKPCILFFDEFDSIAPKRGH---DSTGVTDRVVNQMLTQMDGAEGLDG 2694
             +VRE+F++A+ + PC+LFFDE DSIA +RG    D+ G  DRV+NQ+LT+MDG      
Sbjct: 561  ANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKT 620

Query: 2695 VYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIA 2874
            V+++ AT+RPD+ID ALLRPGRLD+ +   +P+ + R  I ++   K  ++ +V+L  +A
Sbjct: 621  VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALA 680

Query: 2875 EKTTGFSGADMQGLGYNAYLKAVHVTLEELSQR 2973
              T GFSGAD+  +   A   A+   +E+  +R
Sbjct: 681  RHTQGFSGADITEICQRACKYAIRENIEKDIER 713


>O44008|VCP|O44008 (TrEMBL: Trypanosoma brucei) Valosin-containing
            protein homolog.
          Length = 780

 Score =  257 bits (656), Expect = 8e-67
 Identities = 182/628 (28%), Positives = 304/628 (48%), Gaps = 48/628 (7%)
 Frame = +1

Query: 1216 NKLAQQLTEIMYPGIASIPITNFTKIPI--IANVLPYGGLLRFRKNDEYNAWIKPYNLDL 1389
            NK+ ++   I+   +  I +++ + +P     +VLP    ++    D +  ++KPY L+ 
Sbjct: 75   NKVTRRNIRILLGDL--ITVSSHSNVPYGNHVHVLPIDDTVKNLTGDLFETFLKPYFLEA 132

Query: 1390 KKPIK---------------FEIGDE------ILRPSSFIEQEIDKPTTNDTEEQEAIGL 1506
             +P+K               F++ +       I+ P + +  E D     D E  + +G 
Sbjct: 133  YRPVKTGDLFICRGAMRSVEFKVVEVDPGDCCIVAPETVVHCEGDPIRREDEERLDDVGY 192

Query: 1507 DNT---------VEDIVD----------SFITSDNTGTLVYGNSGSGKTLLLKLVAQQLN 1629
            D+          + ++V+          S       G L+YG  GSGKTL+ + VA +  
Sbjct: 193  DDIGGCRRQLVQIREMVELPIRHPELFKSIGIKPPRGILMYGPPGSGKTLIARAVANET- 251

Query: 1630 QQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWNKPSVLILDNIDKLMSVEMENMD 1809
               G F   I+   IM++       N    ++++   N P+++ +D ID +     +   
Sbjct: 252  ---GAFFFLINGPEIMSKMAGESEGNLRNAFVES-EKNAPAIIFIDEIDSIAPKREKAQG 307

Query: 1810 ATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKDN-INKLLLGSHLIENFHHLNPPDK 1986
              +   +++     LT +                + N I+  L      +    +  PD+
Sbjct: 308  EVEKRIVSQL----LTLMDGLKGRSQVIVMAATNRPNAIDPALRRFGRFDREIDIGVPDE 363

Query: 1987 SLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLPNDLKILSD----RIYHEVLFXXXXX 2154
              R EIL +  T  + L   VD+  +  ++ GY+  DL  L      +   E +      
Sbjct: 364  IGRLEIL-RIHTKNMKLDPNVDVEKIAKDSHGYVGADLAQLCTEAAMQCVREKMAVVDWD 422

Query: 2155 XXXXXXXXXXXXXXXXXHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETL 2334
                             H   AL+   PS LR  +++  ++ WSD+GGL + K  L E +
Sbjct: 423  DETIDAEVLDSMSVTNNHFLDALSKMNPSALRETQVETPNVTWSDVGGLLDVKRELQELV 482

Query: 2335 EWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIG 2514
            ++P ++   F    +    G+L YG PGCGKTLLA AIA +C  NFISIKGPE+L  + G
Sbjct: 483  QYPVEFPWKFEKYGISAPKGVLFYGPPGCGKTLLAKAIATECQANFISIKGPELLTMWFG 542

Query: 2515 ASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDST-GVTDRVVNQMLTQMDGAEGLD 2691
             SE +VR++F++A+AA PC+LFFDE DS+A  RGH    G +DRV+NQ+LT+MDG     
Sbjct: 543  ESEANVRDVFDKARAAAPCVLFFDELDSVARSRGHSGDGGASDRVINQILTEMDGMNSKK 602

Query: 2692 GVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEI 2871
             V+++ AT+RPD++D A++RPGRLD+ +   +P+   R+ IL++   K  L+ DV+L ++
Sbjct: 603  NVFIIGATNRPDVLDPAVMRPGRLDQLIYIPLPDKASRVAILKASFRKSPLAPDVDLDQL 662

Query: 2872 AEKTTGFSGADMQGLGYNAYLKAVHVTL 2955
            A  T GFSGAD+ G+   A   A+  ++
Sbjct: 663  AAATHGFSGADLAGICQRACKLAIRESI 690


>Q980U9|SSO0176|Q980U9 (TrEMBL: Sulfolobus solfataricus) AAA family
            ATPase.
          Length = 769

 Score =  256 bits (653), Expect = 2e-66
 Identities = 184/609 (30%), Positives = 293/609 (48%), Gaps = 22/609 (3%)
 Frame = +1

Query: 1558 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 1737
            G L+YG  G GKTLL K +A   N+   YFT  I+   IM++ F   S+    +  +   
Sbjct: 228  GILLYGPPGVGKTLLAKAIA---NETDAYFTS-INGPEIMSK-FYGESEQRLREIFEDAK 282

Query: 1738 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQXXXXXXXXXXXXXKD 1917
             + P+++ +D ID +     E +   +   + +     LT +                + 
Sbjct: 283  KHAPAIIFVDEIDAIAPKRDEVIGEVERRVVAQL----LTLMDGLENRGNVIVIAATNRP 338

Query: 1918 N-INKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLPN 2094
            + ++  L      +    +  PDK  R EIL  + T  + L   VDL  L   T GY   
Sbjct: 339  SAVDPALRRPGRFDREIEIPLPDKQGRLEILQIH-TRNMPLSKDVDLEKLADMTHGYTGA 397

Query: 2095 DLKIL-------------------SDRIYHEVLFXXXXXXXXXXXXXXXXXXXXXXHIEK 2217
            DL  L                    D+I  E+L                           
Sbjct: 398  DLSALVREAAMNSLRRYLPKIDLNQDKIPPEIL---------------ESMEVKMEDFIN 442

Query: 2218 ALAGYTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGI 2397
            A     PS LR + ++   + W+DIGGL+E K  L E +E+P KY+ ++ N  +    GI
Sbjct: 443  AFKEIVPSGLREIYIEVPEVKWTDIGGLEEIKEELKEVVEYPLKYSELYQNSGIEPPKGI 502

Query: 2398 LLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCIL 2577
            LL+G PG GKT+LA A+A + G NFI+++GPEIL+K++G SE++VRE+F +A+   P ++
Sbjct: 503  LLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREIFRKARMYAPAVI 562

Query: 2578 FFDEFDSIAPKRG--HDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLR 2751
            FFDE DSIAP RG  +DS GVT+R+VNQ+L +MDG E L+ V V+AAT+RPD++D ALLR
Sbjct: 563  FFDEIDSIAPIRGISYDS-GVTERIVNQLLAEMDGIEKLENVVVIAATNRPDILDPALLR 621

Query: 2752 PGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAY 2931
            PGR +K +    P+   R +IL+  T  + L +D++L ++AEKT G++GAD+  L   A 
Sbjct: 622  PGRFEKLIYVPPPDKRARTEILKVHTRNIALGEDISLEDVAEKTEGYTGADLAALVREAT 681

Query: 2932 LKAVHVTLEELSQRXXXXXXXXXXXXXXXXXSIEFFQVGNSEKKLKTNEKIQLLHQIQQF 3111
            ++A+  +++                                    KTNE           
Sbjct: 682  MRAIRESMKICID--------------------------------KTNE----------- 698

Query: 3112 MNPNKDNSDSERKAGQDAMNKSKVLITHENFLESLKETKPSISHSEKIKLTKIYKEFVND 3291
             N    +++   K  ++ M  + V ++  +F E++++ KPS++      + + Y+ +V  
Sbjct: 699  -NCKPTDAECRDKTMKECMKVNGVKVSLRHFEEAMRKVKPSVTQD----MLQFYQNWVEK 753

Query: 3292 RDGNMPDGT 3318
                +P  T
Sbjct: 754  ARQQLPKTT 762



 Score =  189 bits (481), Expect = 1e-46
 Identities = 102/230 (44%), Positives = 142/230 (61%)
 Frame = +1

Query: 2275 INWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAG 2454
            + + DIGG+K     + E +E P ++  +F    +    GILLYG PG GKTLLA AIA 
Sbjct: 189  VTYEDIGGMKNIIEKVRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAIAN 248

Query: 2455 QCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV 2634
            +    F SI GPEI++K+ G SEQ +RE+FE A+   P I+F DE D+IAPKR      V
Sbjct: 249  ETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFVDEIDAIAPKRDEVIGEV 308

Query: 2635 TDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDI 2814
              RVV Q+LT MDG E    V V+AAT+RP  +D AL RPGR D+ +   +P+ + RL+I
Sbjct: 309  ERRVVAQLLTLMDGLENRGNVIVIAATNRPSAVDPALRRPGRFDREIEIPLPDKQGRLEI 368

Query: 2815 LQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEEL 2964
            LQ  T  M LS DV+L ++A+ T G++GAD+  L   A + ++   L ++
Sbjct: 369  LQIHTRNMPLSKDVDLEKLADMTHGYTGADLSALVREAAMNSLRRYLPKI 418


  Database: sptrembl
    Posted date:  Oct 14, 2003  6:47 PM
  Number of letters in database: 339,323,595
  Number of sequences in database:  1,070,300
  
Lambda     K      H
   0.316    0.135    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 874,456,689
Number of Sequences: 1070300
Number of extensions: 17307472
Number of successful extensions: 66850
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65413
length of database: 339,323,595
effective HSP length: 132
effective length of database: 198,043,995
effective search space used: 195073335075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)