BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Candida_albicans_chr7-f3-60279-61298-12
         (1017 letters)

Database: sptrembl 
           1,070,300 sequences; 339,323,595 total letters

Searching.................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

P25559|DCC1|DCC1_YEAST (SP: Saccharomyces cerevisiae (Baker's ye...   165   9e-40
Q9HF62|YCL016C|Q9HF62 (TrEMBL: Ashbya gossypii (Yeast) (Eremothe...   108   1e-22
Q9BVC3||Q9BVC3 (TrEMBL: Homo sapiens (Human)) Hypothetical protein.    47   3e-04
Q969N5||Q969N5 (TrEMBL: Homo sapiens (Human)) Hypothetical prote...    47   5e-04
O44992|K09H9.2|O44992 (TrEMBL: Caenorhabditis elegans) Hypotheti...    45   0.001
Q8I525|PFL1930W|Q8I525 (TrEMBL: Plasmodium falciparum (isolate 3...    40   0.044
Q8DTH6|SMU.1365C|Q8DTH6 (TrEMBL: Streptococcus mutans) Hypotheti...    40   0.044
Q8DTJ0|SMU.1347C|Q8DTJ0 (TrEMBL: Streptococcus mutans) Conserved...    40   0.044
Q8C1P7|2010006I05RIK|Q8C1P7 (TrEMBL: Mus musculus (Mouse)) Simil...    39   0.098
P50086|NAS6|PSDA_YEAST (SP: Saccharomyces cerevisiae (Baker's ye...    37   0.49 
Q8I3Q3|PFE1045C|Q8I3Q3 (TrEMBL: Plasmodium falciparum (isolate 3...    36   0.64 
Q25662||Q25662 (TrEMBL: Plasmodium chabaudi) Repeat organellar p...    36   0.64 
Q9CMR5|PM0747|Y747_PASMU (SP: Pasteurella multocida) Hypothetica...    35   1.1  
Q8Y5C7|LMO2138|Q8Y5C7 (TrEMBL: Listeria monocytogenes) Hypotheti...    35   1.4  
Q98PK8|MYPU_7140|Q98PK8 (TrEMBL: Mycoplasma pulmonis) P115-like ...    35   1.9  
Q98S16|ORF232|Q98S16 (TrEMBL: Guillardia theta (Cryptomonas phi)...    34   3.2  
Q8RF85|FN0831|Q8RF85 (TrEMBL: Fusobacterium nucleatum (subsp. nu...    34   3.2  
Q8IK84|PF14_0722|Q8IK84 (TrEMBL: Plasmodium falciparum (isolate ...    34   3.2  
O96343|OCEDI5|O96343 (TrEMBL: Onchocerca cervicalis) Ladder prot...    34   3.2  
Q88N65|PP1350|Q88N65 (TrEMBL: Pseudomonas putida (strain KT2440)...    33   4.1  
Q8PTP3|MM2670|Q8PTP3 (TrEMBL: Methanosarcina mazei (Methanosarci...    33   4.1  
Q91MS4|LSDV088|Q91MS4 (TrEMBL: Lumpy skin disease virus (LSDV)) ...    33   4.1  
Q8JTT0|LW088|Q8JTT0 (TrEMBL: Lumpy skin disease virus (LSDV)) Pu...    33   4.1  
Q86ES0||Q86ES0 (TrEMBL: Schistosoma japonicum (Blood fluke)) Clo...    33   7.0  
Q8TM25|MA2845|Q8TM25 (TrEMBL: Methanosarcina acetivorans) Predic...    33   7.0  
Q9V914|CG11788|Q9V914 (TrEMBL: Drosophila melanogaster (Fruit fl...    33   7.0  
Q9HFM3||Q9HFM3 (TrEMBL: Kluyveromyces lactis (Yeast)) Nuclear fu...    32   9.2  

>P25559|DCC1|DCC1_YEAST (SP: Saccharomyces cerevisiae (Baker's yeast))
            Sister chromatid cohesion protein DCC1.
          Length = 380

 Score =  165 bits (417), Expect = 9e-40
 Identities = 102/360 (28%), Positives = 180/360 (50%), Gaps = 48/360 (13%)
 Frame = +1

Query: 58   TYKLLQLPSKILNQLESKSTNLYIK-----SDINSLALCTDSETFKLRQMNHSNTVLLLN 222
            +YKL+QL  ++L+ ++    N  ++      D + + LC+  +T+ L+Q  HSNTVLL+ 
Sbjct: 14   SYKLIQLTPELLDIIQDPVQNHQLRFKSLDKDKSEVVLCSHDKTWVLKQRKHSNTVLLMR 73

Query: 223  K------------------EPDNKLIGFQKTSYEYELTEIKGSIDTSDIPIFNGQ----- 333
            +                  +P   ++GF KT  E+E  E  G ++ + +PI+NG+     
Sbjct: 74   EFVPEQPITFDETLLFGLSKPYMDVVGFAKTESEFETRETHGELNLNSVPIYNGELDFSD 133

Query: 334  ------TAQQPIDLIALEDNSICSHQEFLSNWYELGGCEIDNGAYIMSADIITELLYLLI 495
                  + +    L  L +NS CS  E +S W+++GG   D    I+S D + + L++L+
Sbjct: 134  KIMKRSSTKVIGTLEELLENSPCSALEGISKWHKIGGSVKDGVLCILSQDFLFKALHVLL 193

Query: 496  TKLM--SLQVHEFSPEDVSSIITP-------PYNDSMLTSIIHKFCTIESEK----YQLN 636
               M  SL +   + ED    +         PY   ++ ++++KF   E E     ++L 
Sbjct: 194  MSAMAESLDLQHLNVEDTHHAVGKDIEDEFNPYTREIIETVLNKFAVQEQEAENNTWRLR 253

Query: 637  DLKITQWFGIVEMSK-INHKMTDISEFLLNWKTSLPSFYNPPLDISQLAGYYCSPIENKI 813
               I QW+GI  + K ++     I EFL+ WK+  P F+   +DI  L GY+  P +  +
Sbjct: 254  IPFIAQWYGIQALRKYVSGISMPIDEFLIKWKSLFPPFFPCDIDIDMLRGYHFKPTDKTV 313

Query: 814  LYVDPESLSENLSQRFKELFELDKSWNYDEFIPFIKKFVPAGKKVDSIILKYGKKKKVGR 993
             Y+   +L  +  +RFK LF L   W+ ++  P I++    G K+DS I+KY ++K++G+
Sbjct: 314  QYIAKSTLPMDPKERFKVLFRLQSQWDLEDIKPLIEELNSRGMKIDSFIMKYARRKRLGK 373


>Q9HF62|YCL016C|Q9HF62 (TrEMBL: Ashbya gossypii (Yeast)
           (Eremothecium gossypii)) Ycl016c (Fragment).
          Length = 252

 Score =  108 bits (269), Expect = 1e-22
 Identities = 57/228 (25%), Positives = 118/228 (51%), Gaps = 16/228 (7%)
 Frame = +1

Query: 244 IGFQKTSYEYELTEIKGSIDTSDIPIFNGQTAQQPIDLIALEDNSICSHQEFLSNWYELG 423
           +G+ + + E E     G +D S +PI+NGQ      D+  L +N+ CS  EF + W   G
Sbjct: 25  LGYTQQTCELEPRATAGQVDLSALPIYNGQHVGDGPDVETLVENATCSRAEFYAAWRAAG 84

Query: 424 GCEIDNGAYIMSADIITELLYLLITKLMS--LQVHEFSPEDVSSII-----------TPP 564
           GC +   A ++S D++   L+L++   ++    +    PE + + I           T P
Sbjct: 85  GCSVGGTACVISPDLLGRTLHLVLATAVADGFDLACVGPEQMWASIARSMAAGAHGATHP 144

Query: 565 YNDSMLTSIIHKFCTIESE--KYQLNDLKITQWFGIVEMSKI-NHKMTDISEFLLNWKTS 735
           Y+  ++ +++H+F  + S+   ++L+  +I +W+G+  + K  + +   + EF++ W++ 
Sbjct: 145 YSREVIETVLHRFGRVGSDGVSFELDLSRIARWYGVQALKKFASTEAIMVDEFMIKWRSL 204

Query: 736 LPSFYNPPLDISQLAGYYCSPIENKILYVDPESLSENLSQRFKELFEL 879
            P+++   LD+  L G +  P   +I Y+   +L  ++  RF++LF +
Sbjct: 205 FPAYFRCDLDLELLYGEFARPQHERIQYLSRSTLPMDIKDRFQQLFRI 252


>Q9BVC3||Q9BVC3 (TrEMBL: Homo sapiens (Human)) Hypothetical protein.
          Length = 393

 Score = 47.4 bits (111), Expect = 3e-04
 Identities = 76/341 (22%), Positives = 142/341 (41%), Gaps = 38/341 (11%)
 Frame = +1

Query: 67   LLQLPSKILNQLESKSTNLYIKSDINSLA-LCTDSETFKLRQMNHSNTVLLLN--KEPDN 237
            LL+L   +  QLE    +L I+ D +  A LC+  +T+ L+  + SN +L +   K PD 
Sbjct: 45   LLELEPTLCQQLED-GHSLVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPGCKTPDQ 103

Query: 238  -------------KLIGFQKTSYEY-----ELTEIKGSIDTSDIPIFNGQTAQQPIDLIA 363
                         ++ GF    +E      +L ++K  +  +    + G  +Q+  D  +
Sbjct: 104  LKKEDSHCNIIHTEIFGFSNNYWELRRRRPKLKKLKKLLMENP---YEGPDSQKEKDSNS 160

Query: 364  -------LEDNSICSHQEFLSNWYELGGCEIDNGAYIMSADIITELLYLLITKLMSLQVH 522
                   L D    S +E ++    L  C+I     I+  D   +LL   +T+L+  +  
Sbjct: 161  SKYTTEDLLDQIQASEEEIMTQLQVLNACKIGGYWRILEFDYEMKLLNH-VTQLVDSESW 219

Query: 523  EFSPEDVSSIIT---PPYNDSMLTSIIH---KFCTIESEKY-QLNDLKITQWFGIVEMSK 681
             F    +++ +    P   + M+   +    K    E E Y +L+  KI +      M  
Sbjct: 220  SFGKVPLNTCLQELGPLEPEEMIEHCLKCYGKKYVDEGEVYFELDADKICR--AAARMLL 277

Query: 682  INHKMTDISEFLLNWKTSLPSFYNPPLDISQLAGYYCSPIENK---ILYVDPESLSENLS 852
             N    +++EF   W+ S+P      LD  QL G       ++   I  +  + L E+  
Sbjct: 278  QNAVKFNLAEFQEVWQQSVPEGMVTSLD--QLKGLALVDRHSRPEIIFLLKVDDLPEDNQ 335

Query: 853  QRFKELFELDKSWNYDEFIPFIKKFVPAGKKVDSIILKYGK 975
            +RF  LF L + W  ++  P+I+      + + +++ KY +
Sbjct: 336  ERFNSLFSLREKWTEEDIAPYIQDLCGEKQTIGALLTKYSR 376


>Q969N5||Q969N5 (TrEMBL: Homo sapiens (Human)) Hypothetical protein
            FLJ30023.
          Length = 393

 Score = 46.6 bits (109), Expect = 5e-04
 Identities = 76/339 (22%), Positives = 141/339 (41%), Gaps = 38/339 (11%)
 Frame = +1

Query: 67   LLQLPSKILNQLESKSTNLYIKSDINSLA-LCTDSETFKLRQMNHSNTVLLLN--KEPDN 237
            LL+L   +  QLE    +L I+ D +  A LC+  +T+ L+  + SN +L +   K PD 
Sbjct: 45   LLELEPTLCQQLED-GHSLVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPGCKTPDQ 103

Query: 238  -------------KLIGFQKTSYEY-----ELTEIKGSIDTSDIPIFNGQTAQQPIDLIA 363
                         ++ GF    +E      +L ++K  +  +    + G  +Q+  D  +
Sbjct: 104  LKKEDSHCNIIHTEIFGFSNNYWELRRRRPKLKKLKKLLMENP---YEGPDSQKEKDSNS 160

Query: 364  -------LEDNSICSHQEFLSNWYELGGCEIDNGAYIMSADIITELLYLLITKLMSLQVH 522
                   L D    S +E ++    L  C+I     I+  D   +LL   +T+L+  +  
Sbjct: 161  SKYTTEDLLDQIQASEEEIMTQLQVLNACKIGGYWRILEFDYEMKLLNH-VTQLVDSESW 219

Query: 523  EFSPEDVSSIIT---PPYNDSMLTSIIH---KFCTIESEKY-QLNDLKITQWFGIVEMSK 681
             F    +++ +    P   + M+   +    K    E E Y +L+  KI +      M  
Sbjct: 220  SFGKVPLNTCLQELGPLEPEEMIEHCLKCYGKKYVDEGEVYFELDADKICR--AAARMLL 277

Query: 682  INHKMTDISEFLLNWKTSLPSFYNPPLDISQLAGYYCSPIENK---ILYVDPESLSENLS 852
             N    +++EF   W+ S+P      LD  QL G       ++   I  +  + L E+  
Sbjct: 278  QNAVKFNLAEFQEVWQQSVPEGMVTSLD--QLKGLALVDRHSRPEIIFLLKVDDLPEDNQ 335

Query: 853  QRFKELFELDKSWNYDEFIPFIKKFVPAGKKVDSIILKY 969
            +RF  LF L + W  ++  P+I+      + + +++ KY
Sbjct: 336  ERFNSLFSLREKWTEEDIAPYIQDLCGEKQTIGALLTKY 374


>O44992|K09H9.2|O44992 (TrEMBL: Caenorhabditis elegans) Hypothetical
            protein K09H9.2.
          Length = 443

 Score = 45.4 bits (106), Expect = 0.001
 Identities = 72/358 (20%), Positives = 143/358 (39%), Gaps = 36/358 (10%)
 Frame = +1

Query: 1    MSEYSVYQQLNEDTNATKYTYKLLQLPSKILNQLESKSTNLYIKSD-INSLALCTDSETF 177
            M++     + + D +     + LL +   ++    S+  +L I+ D  +   LCTD+ TF
Sbjct: 73   MNKTMTKMEFSPDYSDPSSEFMLLSVDESVIGAF-SEGQSLTIRGDSTDDAVLCTDNATF 131

Query: 178  KLRQMNHSNTVLLLNK---EPDNKLI-GFQKTSYE---YELTEIKGSIDTSDIPIFNGQT 336
             ++ +  + TVLLL+K    PD+  +  FQ  +     +   E+   +D   I       
Sbjct: 132  PMKIIESATTVLLLHKCLEAPDSPTLPNFQVKTIGGKCFSTGELCPQVDVLSIGRLKDML 191

Query: 337  AQQPI----------------DLIALEDNSICSHQEFLSNWYELGGCEIDNGAY-IMSAD 465
             +Q +                 L  L ++   S +E      +L   +  +G Y  +S  
Sbjct: 192  REQELRWDWKDREEEENLKGYKLRDLLNSVQMSVEEVKIALNDLPVVKFSSGRYRYLSHK 251

Query: 466  IITELLYLLITKLMSLQVHEFSPEDVS-----SIITPPYNDSMLTSIIHKFCTIESEK-- 624
               E+L L++  L    + +   E +S     S +     D ++   ++  C    E   
Sbjct: 252  YRGEMLGLIVELLDEDSIGDVKLEKISRASLRSNLPENVPDEVIDWFLNSRCEQNPEDPF 311

Query: 625  -YQLNDLKITQWFGIVEMSKINHKMTDISEFLLNWKTSLPSFYNPPLDISQLAGYYC--- 792
             Y+L ++ + +   +V +     +   + +F       LP  Y   ++I+QL G      
Sbjct: 312  TYRLPEINLIRDLTVVIL--YGTQKMPLQQFRELLHKILP--YGVTMNIAQLEGVADISD 367

Query: 793  SPIENKILYVDPESLSENLSQRFKELFELDKSWNYDEFIPFIKKFVPAGKKVDSIILK 966
            +P    I Y+ PE L + + +R   LFE  K W+ ++  P+ K    +    D  +++
Sbjct: 368  APFGKVISYLSPEDLPDTIKERMLYLFEYRKLWSMEQLRPYFKDVYKSKVAFDKYVVQ 425


>Q8I525|PFL1930W|Q8I525 (TrEMBL: Plasmodium falciparum (isolate 3D7))
            Hypothetical protein.
          Length = 5767

 Score = 40.0 bits (92), Expect = 0.044
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
 Frame = +1

Query: 19   YQQLNEDTNAT-----KYTYKLLQLPSKIL-----NQLESKSTNLYIKSDINSLALCTDS 168
            Y+QLNE  N       K  Y+L  L  ++L     NQ++++  N  + SD+N      D 
Sbjct: 4825 YKQLNEQYNEQIILIQKNEYELKSLSDQLLLEKNENQIKTEKINKLLNSDLNHFNTSLDK 4884

Query: 169  ETFKLRQMNH---SNTVLLLNKEPDNKLIGFQKTSYE 270
              ++L ++N+    N +LL   E   K+I   +  +E
Sbjct: 4885 SAYQLSELNNEKKKNKILLNELEEKEKIISHLQKDFE 4921


>Q8DTH6|SMU.1365C|Q8DTH6 (TrEMBL: Streptococcus mutans) Hypothetical
           protein, possible permease.
          Length = 781

 Score = 40.0 bits (92), Expect = 0.044
 Identities = 24/99 (24%), Positives = 44/99 (44%)
 Frame = +1

Query: 10  YSVYQQLNEDTNATKYTYKLLQLPSKILNQLESKSTNLYIKSDINSLALCTDSETFKLRQ 189
           Y +   +    N+ K+T+K+  +       ++    NL  +     +   T+ + F + +
Sbjct: 144 YKMNDSIQIQINSKKFTFKIAGIIENPEFVMKVSGNNLTPEPQKFGIGYITEQKAFDISK 203

Query: 190 MNHSNTVLLLNKEPDNKLIGFQKTSYEYELTEIKGSIDT 306
            NHS   LLL  + +N     QK S +Y+ T I G + T
Sbjct: 204 KNHSYNQLLLKIKGNNSKKVLQKLSEDYDTTYISGLVTT 242


>Q8DTJ0|SMU.1347C|Q8DTJ0 (TrEMBL: Streptococcus mutans) Conserved
           hypothetical protein, possible permease.
          Length = 780

 Score = 40.0 bits (92), Expect = 0.044
 Identities = 24/99 (24%), Positives = 44/99 (44%)
 Frame = +1

Query: 10  YSVYQQLNEDTNATKYTYKLLQLPSKILNQLESKSTNLYIKSDINSLALCTDSETFKLRQ 189
           Y +   +    N+ K+T+K+  +       ++    NL  +     +   T+ + F + +
Sbjct: 143 YKMNDSIQIQINSKKFTFKIAGIIENPEFVMKVSGNNLTPEPQKFGIGYITEQKAFDISK 202

Query: 190 MNHSNTVLLLNKEPDNKLIGFQKTSYEYELTEIKGSIDT 306
            NHS   LLL  + +N     QK S +Y+ T I G + T
Sbjct: 203 KNHSYNQLLLKIKGNNSKKVLQKLSEDYDTTYISGLVTT 241


>Q8C1P7|2010006I05RIK|Q8C1P7 (TrEMBL: Mus musculus (Mouse)) Similar
           to CDNA FLJ30023 FIS.
          Length = 214

 Score = 38.9 bits (89), Expect = 0.098
 Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
 Frame = +1

Query: 670 EMSKINHKMTDISEFLLNWKTSLPSFYNPPLDISQLAGYYCSPIENK---ILYVDPESLS 840
           EM   N    +++EF   W+ S+P      LD  QL G       ++   I  +  + L 
Sbjct: 95  EMLLQNAVKFNLAEFQEVWQQSVPEGMTTRLD--QLKGLALVDRNSRPEIIFLLKVDDLP 152

Query: 841 ENLSQRFKELFELDKSWNYDEFIPFIKKFVPAGKKVDSIILKYGK 975
           E    RF  LF L + W  ++  P+I+      + + +++ KY +
Sbjct: 153 EGTQDRFNSLFSLREKWTEEDITPYIQDLCGEKQTIGALLTKYSR 197


>P50086|NAS6|PSDA_YEAST (SP: Saccharomyces cerevisiae (Baker's
           yeast)) Probable 26S proteasome regulatory subunit p28
           (Proteasome non-ATPase subunit 6).
          Length = 228

 Score = 36.6 bits (83), Expect = 0.49
 Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 25/133 (18%)
 Frame = +1

Query: 157 CTDSETFKLRQMNHSNTVLLLNKEPDNKL-----IGFQKTSYEYELTEIKGSIDTSDIPI 321
           C ++E FK++++ HS   LLL K+ D ++     + FQ       L     +++  D P 
Sbjct: 10  CMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPD 69

Query: 322 FNGQTA-----------------QQPI--DLIALEDNSI-CSHQEFLSNWYELGGCEIDN 441
            +G T                   +P+  DL  + +  + C H      W+E+    I+N
Sbjct: 70  DSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN 129

Query: 442 GAYIMSADIITEL 480
           GA +   D   ++
Sbjct: 130 GASVRIKDKFNQI 142


>Q8I3Q3|PFE1045C|Q8I3Q3 (TrEMBL: Plasmodium falciparum (isolate 3D7))
            Hypothetical protein.
          Length = 2054

 Score = 36.2 bits (82), Expect = 0.64
 Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 13/197 (6%)
 Frame = +1

Query: 430  EIDNGAYIMSADIITELLYLLITKLMSLQVHEFSPEDVSSIITPPYNDSMLTSIIHKFCT 609
            E  N    +   ++   L+  I KL + + + F P   + IIT  Y D    SI  +   
Sbjct: 927  ETTNNIMTLQMMVVIGELFRNIRKLRTKEKYFFKPIIQTDIITDLYKDK---SIYDEHMD 983

Query: 610  IESEKYQLNDLKITQWFGIVEMSKIN-HKMTDISEFLLNWKT------SLPS-----FYN 753
            IE+ KY +N+LKI   + +     +N     +I+ + LN+ T       LP+     F +
Sbjct: 984  IENMKYVINNLKIK--YPLQNNITLNDQNREEIAYYFLNYYTKHIFRFDLPNNIVIKFVD 1041

Query: 754  PPLDISQLAGYYCSPIENKILYVDPESLSENLSQRFKELFELDKSWN-YDEFIPFIKKFV 930
              L ++     Y     + I+Y++    +  +  R      LD+  N Y+++  ++ K+ 
Sbjct: 1042 NILGLTYYDYNYDYLTNDNIIYINKNITNSLILSRVL----LDECLNIYEKYTTYVHKY- 1096

Query: 931  PAGKKVDSIILKYGKKK 981
              G   DS  ++  KKK
Sbjct: 1097 --GGNSDSETIEKAKKK 1111


>Q25662||Q25662 (TrEMBL: Plasmodium chabaudi) Repeat organellar
            protein.
          Length = 1939

 Score = 36.2 bits (82), Expect = 0.64
 Identities = 71/348 (20%), Positives = 141/348 (40%), Gaps = 48/348 (13%)
 Frame = +1

Query: 1    MSEYSVYQQLNEDTNAT--------KYTYKLLQLPSKILNQLESKSTNLYIKSDINS--- 147
            M EY +  QL E   +         +Y  K+ +L  ++  + E K  N   + ++N    
Sbjct: 72   MKEYELEDQLKETLKSITALSIKVKEYEVKIEELEKELKLEKE-KQINKEYEKELNEKSE 130

Query: 148  -----LALCTDSE---TFKLRQMNHSNTVLLLNKEPDNKLIGF------QKTSYEYELTE 285
                 + L  + E     K  ++N+   + L  +E  N +         +K    YE+T 
Sbjct: 131  FIKRQMELLKEKELNINLKENKINNKEIITLKREEKLNDIESEYIEKNKEKEKLNYEVTN 190

Query: 286  IKGSIDTSDIPIFNGQTAQQPIDLIALE-DNSICSHQEFLSNWYEL-----GGCEIDNGA 447
            IK S+D     +   +   + I+   +E +N++   +EF+    E+     G       A
Sbjct: 191  IKMSLDKLTCEVQEKKDNLEKINKKVIEKENNLRELKEFMKEKNEIIESLDGTINDKKNA 250

Query: 448  Y---IMSADIITELLYLLITKLMSLQVH----EFSPEDVSSIITPPYND-----SMLTSI 591
            Y    +S +   +++ +L +KL+  + +    +   E  + II     D         S 
Sbjct: 251  YEKLEISFEEKRKMIEMLDSKLIEKEENFANKQAKLEKENEIIIEKLKDIESREKDFKSK 310

Query: 592  IHKFCTIESEKYQLNDLKITQWFGIVEMSKINHKMTDISEFLLNWKTSLPSFYNPPLD-- 765
              KF ++E+E   LN LK        +M     ++ D+S+ L+  +  +    N   D  
Sbjct: 311  EEKFASMENE---LNTLKSDLSKNACQMEVYKLEIKDLSQSLVEKEREIFEIKNEYDDKI 367

Query: 766  ---ISQLAGYYCSPIENKILYVDPESLSENLSQRFKELFELDKSWNYD 900
                 +L+      I+N +L+ + E +++ L ++  EL E+ K +N +
Sbjct: 368  NNMKEKLSSINDKGIDNTVLHSEEEKINKLLKEKETELNEIHKKYNLE 415


>Q9CMR5|PM0747|Y747_PASMU (SP: Pasteurella multocida) Hypothetical
           protein PM0747.
          Length = 195

 Score = 35.4 bits (80), Expect = 1.1
 Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
 Frame = +1

Query: 643 KITQWFGIVEMSKINHKMTDISEFLLNWKTSLPSFYNPPLDISQLAGYYCSPIENKIL-- 816
           KITQ +  +E +   H +  + +        L + + P LD +Q +      ++   L  
Sbjct: 88  KITQAYKEIENAAEAHLLALLPK-------ELQADFAPYLDSTQFSAQEKHVVKQADLIC 140

Query: 817 -YVDPESLSENLSQRFK----ELFELDKSWNYDEFIPFIKKFVPA-GKKVDSIIL 963
            YV  +   EN +Q FK     L  L K+W+ DE   FI+ F+P+ GK +D I L
Sbjct: 141 AYVKAQFELENGNQEFKAAKARLETLMKTWHSDEMRYFIEVFIPSFGKPIDEITL 195


>Q8Y5C7|LMO2138|Q8Y5C7 (TrEMBL: Listeria monocytogenes) Hypothetical
           protein lmo2138.
          Length = 485

 Score = 35.0 bits (79), Expect = 1.4
 Identities = 60/278 (21%), Positives = 106/278 (38%), Gaps = 5/278 (1%)
 Frame = +1

Query: 7   EYSVYQQLNEDTNATKYTYKLLQLPSKILNQLESKSTNLYIKSDINSLALCTDSETFKLR 186
           +Y  Y Q   +T    + Y   +   KIL Q+  KS      +++         E + + 
Sbjct: 65  DYKAYIQAKLETTGDIFGYTPTERREKILLQVLFKSPKYLNVTELY--------EDYYVG 116

Query: 187 QMNHSNTVLLLNKEPDNKLIGFQKTSYEYELTEIKGSIDTSDIPIFNGQTAQQPIDLIAL 366
             +  N   LLN+  +   +  +K   E  +   + +I T+   + N        DL   
Sbjct: 117 YNSIKNDFSLLNQAIEKYDLALEKRQKEIRVVGTEENIRTAINEVINNLDLSTYDDLKTE 176

Query: 367 EDNSICSHQEFLSNWYELGGCEIDNGAYIMSA---DI-ITELLYLLITKLMSLQVHEFSP 534
             +   +  +F+    EL    I+N   I      DI I   LY+LI +    +V +F  
Sbjct: 177 YSDLNKADVQFIVRQMEL----IENKLMISIPYPYDINIFSHLYILINRFRQGEVEDFKE 232

Query: 535 EDVSSIITPPYNDSMLTSIIHKFCTIESE-KYQLNDLKITQWFGIVEMSKINHKMTDISE 711
            D   I+T   N+ + T  +     IE   K +L   +   +   +  S+ NH++  +  
Sbjct: 233 SDDDYIVT---NEKLHTLAVEAIDAIEQYLKMKLPKRETFHFLQYLISSRFNHEIELVPG 289

Query: 712 FLLNWKTSLPSFYNPPLDISQLAGYYCSPIENKILYVD 825
            +L     +  FY     I Q+A     PI  K L ++
Sbjct: 290 KILPIVEEMTDFY-----IEQVAAKINMPINKKQLKIE 322


>Q98PK8|MYPU_7140|Q98PK8 (TrEMBL: Mycoplasma pulmonis) P115-like
            (Mycoplasma hyorhinis) ABC transporter ATP-binding
            protein.
          Length = 979

 Score = 34.7 bits (78), Expect = 1.9
 Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
 Frame = +1

Query: 130  KSDIN-SLALCTDSETFKLRQMNHSNTVLLLNKEPDNKLIGFQKTSYEYELTEIKGSIDT 306
            K+D+  SL +  DS + K+ + N +   L  N++   +L  F   +YE        SID 
Sbjct: 697  KNDLEKSLRILNDSFSKKITEKNKAEFYLDTNQK---RLSEFYNMTYEMAKDNFSLSIDI 753

Query: 307  SDIPIFNGQTAQQPIDLIALEDNSICSHQEFLSNWYELGGCE---IDNGAYIMSADIITE 477
            ++   F G+  ++  DL  +  +SI S++E    +  L   E   +D    I SA  I E
Sbjct: 754  TEAEEFVGRIKEEIKDLGNINIDSIKSYEEISERYDGLKATESEIVDAKDKIESA--IKE 811

Query: 478  LLYLLITKL 504
            +  ++ITKL
Sbjct: 812  MDKIIITKL 820


>Q98S16|ORF232|Q98S16 (TrEMBL: Guillardia theta (Cryptomonas phi))
           Hypothetical protein orf232 from chromosome 3.
          Length = 232

 Score = 33.9 bits (76), Expect = 3.2
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
 Frame = +1

Query: 31  NEDTNATKYTYKLLQLPSKILNQLESKSTNLYIKSDIN--------SLALCTDSETFKLR 186
           N   NA   T+ L     K L  ++ +   L +K +I+        S  +   S  F+  
Sbjct: 126 NISKNANNMTFNLKSYKKKNLYMIKREMNRLSLKVEIDIKILNEKVSYLITNQSICFEQI 185

Query: 187 QMNHSNTVLLLNKEPDNKLIGFQKTSYE 270
           ++N+SN +  LNK  +  L  F K SY+
Sbjct: 186 ELNNSNVLKNLNKTRETLLKKFHKPSYQ 213


>Q8RF85|FN0831|Q8RF85 (TrEMBL: Fusobacterium nucleatum (subsp.
           nucleatum)) Hemin receptor.
          Length = 698

 Score = 33.9 bits (76), Expect = 3.2
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
 Frame = +1

Query: 688 HKMTDISEFLLNWKTSLPSFYNPPLDISQLAGYYCSPIENKILYVDPESLSENLSQRFKE 867
           HK+TD     L++       Y    D  + + Y+ + +  KI      S ++NLS R+ +
Sbjct: 180 HKLTDKITLQLSYLRDNKDLYFK--DTYRNSDYFTAGLNYKI------SDNQNLSLRYSK 231

Query: 868 LFELD---KSWNYDEFIPFIKKFVPAGKKVDSIILKYGKK 978
           LFE     ++ NY  F+   K +VP  +KV   + K G K
Sbjct: 232 LFEKGQFVRTINYQNFMKEKKNYVPEDRKVTVGLDKAGHK 271


>Q8IK84|PF14_0722|Q8IK84 (TrEMBL: Plasmodium falciparum (isolate 3D7))
            Hypothetical protein.
          Length = 5890

 Score = 33.9 bits (76), Expect = 3.2
 Identities = 21/81 (25%), Positives = 39/81 (48%)
 Frame = +1

Query: 58   TYKLLQLPSKILNQLESKSTNLYIKSDINSLALCTDSETFKLRQMNHSNTVLLLNKEPDN 237
            T+  +  PS+  + +     N+ I     ++      E  ++  + H NT +L NK+ + 
Sbjct: 1051 TFHFIGAPSQKYHLIRENEENIIIHGYFKNI------ENERIHILKHQNTCVLTNKDKNK 1104

Query: 238  KLIGFQKTSYEYELTEIKGSI 300
            KL+  + +  EY L EIK +I
Sbjct: 1105 KLL--KSSEIEYILNEIKTNI 1123


>O96343|OCEDI5|O96343 (TrEMBL: Onchocerca cervicalis) Ladder protein
           (Fragment).
          Length = 133

 Score = 33.9 bits (76), Expect = 3.2
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 826 PESLSENLSQRFKELFELDKSWNYDEFIPFIKKFVP 933
           P+ LS  + + FK++F+ DK    DE+ P  +K +P
Sbjct: 90  PKELSMKVEEMFKDVFDKDKKVKIDEYAPVCRKILP 125


>Q88N65|PP1350|Q88N65 (TrEMBL: Pseudomonas putida (strain KT2440))
           Sensory box histidine kinase/response regulator.
          Length = 676

 Score = 33.5 bits (75), Expect = 4.1
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +1

Query: 13  SVYQQLNEDTNATKYTYKLLQLPSKILNQLESKSTNL--YIKSDINSL--ALCTDSETFK 180
           S Y Q       T++T + L+L  ++ +++E K T    Y+ S I+S+  AL    E   
Sbjct: 249 SAYDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSALIALDEQLY 308

Query: 181 LRQMNHSNTVL 213
           + Q NH  TVL
Sbjct: 309 VTQWNHEATVL 319


>Q8PTP3|MM2670|Q8PTP3 (TrEMBL: Methanosarcina mazei (Methanosarcina
           frisia)) Hypothetical protein MM2670.
          Length = 861

 Score = 33.5 bits (75), Expect = 4.1
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 208 VLLLNKEPDNKLIGFQKTSYEYELTEIKGSIDTSDIPIFNGQTAQQPIDL 357
           VLL+  EPD+ L G  K  Y+  ++   GS++ +D  I + Q A    D+
Sbjct: 275 VLLVTDEPDSPLAGMMKEIYDVRVSGSFGSLNRTDAVIIDNQAASTISDV 324


>Q91MS4|LSDV088|Q91MS4 (TrEMBL: Lumpy skin disease virus (LSDV))
            LSDV088 putative transcription termination factor.
          Length = 635

 Score = 33.5 bits (75), Expect = 4.1
 Identities = 80/358 (22%), Positives = 147/358 (41%), Gaps = 39/358 (10%)
 Frame = +1

Query: 4    SEYSVYQQLN-EDTNATKYTY-KLLQLPSKILNQLESKSTNLYIKSDINSLALCTD-SET 174
            +E+S+++ ++  D+ A K  Y K + +  K    +  K+  L IKS I+S  +    + T
Sbjct: 238  NEFSIFEDVDGSDSFARKKVYMKYINMTPK-QEFIYQKAKMLEIKSGISSFRIYRRMAAT 296

Query: 175  F--------KLRQMNHSNT-VLLLNKEPDNKLIG--FQKTSYEY--ELTEIKGSIDTSDI 315
            F        K R ++  N  V  L K+ +N + G  F   + +Y  +  E+KG ++ SD+
Sbjct: 297  FSFDVLPEKKDRNLDDFNKEVNTLYKDFENSIKGRYFSDKALDYFKKGEELKGDVNASDL 356

Query: 316  PIFNGQTAQQPIDLIALEDNSICSHQEFLSNWYELGGCEIDNGAYIMSADIITELLYLLI 495
             ++N            L++ S    +  LS     G C +    ++  + II  LLY  +
Sbjct: 357  SLYN-----------ELKEKSCKFTEVCLSILSSPGKCLVFE-PFVNQSGIIILLLYFSV 404

Query: 496  TKLMSLQVHEFSPEDVSSII--TPPYNDSMLT-SIIHKFCTIESEKYQLNDLKITQWFGI 666
             K+  +   EFS    ++ +     +N+ + T   + K C      + L+  +   +F I
Sbjct: 405  FKISYI---EFSSRTKNTRVQMVSKFNEEVNTDGTVIKVCV-----FSLSGGEGISFFSI 456

Query: 667  VEMSKINHKMTDIS-EFLLNWKTSLPSFYNPPLDISQL-AGYYCSPIENKILYVDPESL- 837
             ++  ++    + S   ++     L S  N P D   +   +  + + N    VD + L 
Sbjct: 457  NDIFILDMTWNEASLRQIIGRAIRLNSHVNTPKDRRYVNVHFIIARLSNGESTVDDDLLE 516

Query: 838  -----SENLSQRFKELFELDKSWNYDE------------FIPFIKKFVPAGKKVDSII 960
                 S+  SQ FK L E    W YD             +IP I + +    K   I+
Sbjct: 517  IIRTKSKEFSQLFKVLKESSIEWIYDHQKNFSPVDDESGWIPLISRSIDMNAKTKEIV 574


>Q8JTT0|LW088|Q8JTT0 (TrEMBL: Lumpy skin disease virus (LSDV))
            Putative transcription termination factor.
          Length = 635

 Score = 33.5 bits (75), Expect = 4.1
 Identities = 80/358 (22%), Positives = 147/358 (41%), Gaps = 39/358 (10%)
 Frame = +1

Query: 4    SEYSVYQQLN-EDTNATKYTY-KLLQLPSKILNQLESKSTNLYIKSDINSLALCTD-SET 174
            +E+S+++ ++  D+ A K  Y K + +  K    +  K+  L IKS I+S  +    + T
Sbjct: 238  NEFSIFEDVDGSDSFARKKVYMKYINMTPK-QEFIYQKAKMLEIKSGISSFRIYRRMAAT 296

Query: 175  F--------KLRQMNHSNT-VLLLNKEPDNKLIG--FQKTSYEY--ELTEIKGSIDTSDI 315
            F        K R ++  N  V  L K+ +N + G  F   + +Y  +  E+KG ++ SD+
Sbjct: 297  FSFDVLPEKKDRNLDDFNKEVNTLYKDFENSIKGRYFSDKALDYFKKGEELKGDVNASDL 356

Query: 316  PIFNGQTAQQPIDLIALEDNSICSHQEFLSNWYELGGCEIDNGAYIMSADIITELLYLLI 495
             ++N            L++ S    +  LS     G C +    ++  + II  LLY  +
Sbjct: 357  SLYN-----------ELKEKSCKFTEVCLSILSSPGKCLVFE-PFVNQSGIIILLLYFSV 404

Query: 496  TKLMSLQVHEFSPEDVSSII--TPPYNDSMLT-SIIHKFCTIESEKYQLNDLKITQWFGI 666
             K+  +   EFS    ++ +     +N+ + T   + K C      + L+  +   +F I
Sbjct: 405  FKISYI---EFSSRTKNTRVQMVSKFNEEVNTDGTVIKVCV-----FSLSGGEGISFFSI 456

Query: 667  VEMSKINHKMTDIS-EFLLNWKTSLPSFYNPPLDISQL-AGYYCSPIENKILYVDPESL- 837
             ++  ++    + S   ++     L S  N P D   +   +  + + N    VD + L 
Sbjct: 457  NDIFILDMTWNEASLRQIIGRAIRLNSHVNTPKDRRYVNVHFIIARLSNGESTVDDDLLE 516

Query: 838  -----SENLSQRFKELFELDKSWNYDE------------FIPFIKKFVPAGKKVDSII 960
                 S+  SQ FK L E    W YD             +IP I + +    K   I+
Sbjct: 517  IIRTKSKEFSQLFKVLKESSIEWIYDHQKNFSPVDDESGWIPLISRSIDMNAKTKEIV 574


>Q86ES0||Q86ES0 (TrEMBL: Schistosoma japonicum (Blood fluke)) Clone
           ZZD1493 mRNA sequence.
          Length = 261

 Score = 32.7 bits (73), Expect = 7.0
 Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 27/153 (17%)
 Frame = +1

Query: 556 TPPYN----DSMLTSIIHKFCTIESEKYQL-NDLKITQWFGIVEMSKINHKMTDISEFLL 720
           TP Y     D  L S+ H+      + Y    + KI Q  G   +S I+    D+++FL 
Sbjct: 24  TPKYYQASYDVNLCSMEHRKAPDSKDTYVYPRNSKICQVVGEHLLSVISS--FDLNDFLR 81

Query: 721 NWKTSLPSFYNPPL--DISQLAGYYC--SPIENKILYVDPESL----------------- 837
            WK S+P+   P L   ++     YC  +P+    L + PES                  
Sbjct: 82  LWKASVPNGLRPKLRRHLTCAGRAYCEITPLPLNSLSIKPESSDIRSRFRCISLLRSEDL 141

Query: 838 -SENLSQRFKELFELDKSWNYDEFIPFIKKFVP 933
             +++  R   LFE    W   E   FIK+ +P
Sbjct: 142 PDDSVEARLCALFERCSMWPEPEIGSFIKEMLP 174


>Q8TM25|MA2845|Q8TM25 (TrEMBL: Methanosarcina acetivorans) Predicted
           protein.
          Length = 860

 Score = 32.7 bits (73), Expect = 7.0
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +1

Query: 208 VLLLNKEPDNKLIGFQKTSYEYELTEIKGSIDTSDIPIFNGQTA 339
           +LL++ EPD+ L    K  Y+  +T+  GS++ +D  + + Q A
Sbjct: 275 ILLISNEPDSPLANTMKEIYDVRVTKSFGSLNGTDAVVMDNQAA 318


>Q9V914|CG11788|Q9V914 (TrEMBL: Drosophila melanogaster (Fruit fly))
           CG11788 protein.
          Length = 393

 Score = 32.7 bits (73), Expect = 7.0
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = +1

Query: 709 EFLLNWKTSLPSFYNPPLDISQLAGYYCSPIENK---ILYVDPESLSENLSQRFKELFEL 879
           EF+  W+  LP   +   D+  L G      E     I  +  E L  N+S R + LF+ 
Sbjct: 322 EFMRTWQEVLPEGMS--CDLKYLRGLGICDKEGAQPCIRSLAEELLPTNISDRMRALFKT 379

Query: 880 DKSWNYDEFIPFIK 921
            K W  +E  P+I+
Sbjct: 380 KKRWTMEEMEPYIE 393


>Q9HFM3||Q9HFM3 (TrEMBL: Kluyveromyces lactis (Yeast)) Nuclear
           fusion protein.
          Length = 406

 Score = 32.3 bits (72), Expect = 9.2
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +1

Query: 4   SEYSVYQQLNEDTNATKYTY-KLLQLPSKILNQLESKSTNLYIKSDINSLALCTDSETFK 180
           +E + YQQ + DT   +YT  K L    K + +LES+   L  K + N+L + ++ ET  
Sbjct: 304 TEMTEYQQKSHDTETKEYTLNKELDDARKKIGELESRVEELSKKQEENTLIVDSNIETLP 363

Query: 181 L 183
           L
Sbjct: 364 L 364


  Database: sptrembl
    Posted date:  Oct 14, 2003  6:47 PM
  Number of letters in database: 339,323,595
  Number of sequences in database:  1,070,300
  
Lambda     K      H
   0.317    0.135    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 309,554,355
Number of Sequences: 1070300
Number of extensions: 6725361
Number of successful extensions: 20143
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 19377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20120
length of database: 339,323,595
effective HSP length: 122
effective length of database: 208,746,995
effective search space used: 45089350920
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)