BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Candida_albicans_chr7-r1-69539-69078-3
         (459 letters)

Database: sptrembl 
           1,070,300 sequences; 339,323,595 total letters

Searching.................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q876Z1|YCL012C|Q876Z1 (TrEMBL: Ashbya gossypii (Yeast) (Eremothe...    84   4e-16
Q8J0N0|YCL012C|Q8J0N0 (TrEMBL: Saccharomyces paradoxus (Yeast)) ...    80   8e-15
Q8J0M6|YCL012C|Q8J0M6 (TrEMBL: Saccharomyces bayanus (Yeast) (Sa...    79   1e-14
Q8J0M4|YCL012C|Q8J0M4 (TrEMBL: Saccharomyces cerevisiae (Baker's...    77   9e-14
O14068|SPAC1687.07|YFF7_SCHPO (SP: Schizosaccharomyces pombe (Fi...    75   2e-13
Q8J0M8||Q8J0M8 (TrEMBL: Cryptococcus neoformans var. grubii) Ayc...    59   2e-08
Q8IJ80|PF10_0319|Q8IJ80 (TrEMBL: Plasmodium falciparum (isolate ...    37   0.059
Q8IB67|GCN5|Q8IB67 (TrEMBL: Plasmodium falciparum (isolate 3D7))...    34   0.50 
Q8I1R5|PFD0835C|Q8I1R5 (TrEMBL: Plasmodium falciparum (isolate 3...    34   0.50 
Q8XIV0|CPE2013|Q8XIV0 (TrEMBL: Clostridium perfringens) Hypothet...    33   1.5  
Q8MMZ9||Q8MMZ9 (TrEMBL: Dictyostelium discoideum (Slime mold)) H...    32   1.9  
Q8IDL6|MAL13P1.243|Q8IDL6 (TrEMBL: Plasmodium falciparum (isolat...    32   1.9  
Q88HI4|PP3373|Q88HI4 (TrEMBL: Pseudomonas putida (strain KT2440)...    32   1.9  
Q88MH2|PP1599|Q88MH2 (TrEMBL: Pseudomonas putida (strain KT2440)...    32   1.9  
Q8I5M9|PFL0865W|Q8I5M9 (TrEMBL: Plasmodium falciparum (isolate 3...    32   2.5  
Q8I5I1|PFL1135C|Q8I5I1 (TrEMBL: Plasmodium falciparum (isolate 3...    32   2.5  
Q8IIQ7|PF11_0111|Q8IIQ7 (TrEMBL: Plasmodium falciparum (isolate ...    32   2.5  
Q869R4||Q869R4 (TrEMBL: Dictyostelium discoideum (Slime mold)) S...    32   3.2  
P02401|RPLP2|RLA2_RAT (SP: Rattus norvegicus (Rat)) 60S acidic r...    31   4.2  
Q88YW3|LP_0628|Q88YW3 (TrEMBL: Lactobacillus plantarum) Prophage...    31   4.2  
Q97FK1|SBCC|SBCC_CLOAB (SP: Clostridium acetobutylicum) Nuclease...    31   5.5  
Q886N5|PSPTO1542|Q886N5 (TrEMBL: Pseudomonas syringae (pv. tomat...    31   5.5  
Q9CQ99|RPLP2|Q9CQ99 (TrEMBL: Mus musculus (Mouse)) 2700049I22Rik...    31   5.5  
P05387|RPLP2|RLA2_HUMAN (SP: Homo sapiens (Human)) 60S acidic ri...    31   5.5  
Q97BN4|TV0421|Q97BN4 (TrEMBL: Thermoplasma volcanium) Ribosomal ...    31   5.5  
Q9HL72|TA0358|Q9HL72 (TrEMBL: Thermoplasma acidophilum) Probable...    31   5.5  
Q86IG9||Q86IG9 (TrEMBL: Dictyostelium discoideum (Slime mold)) H...    30   7.2  
Q8T145||Q8T145 (TrEMBL: Dictyostelium discoideum (Slime mold)) S...    30   7.2  
P41889|CUT9|CUT9_SCHPO (SP: Schizosaccharomyces pombe (Fission y...    30   7.2  
Q8TZC6|RPP1A|Q8TZC6 (TrEMBL: Methanopyrus kandleri) Ribosomal pr...    30   7.2  

>Q876Z1|YCL012C|Q876Z1 (TrEMBL: Ashbya gossypii (Yeast)
           (Eremothecium gossypii)) YCL012Cp.
          Length = 134

 Score = 84.3 bits (207), Expect = 4e-16
 Identities = 48/107 (44%), Positives = 65/107 (60%)
 Frame = +1

Query: 139 RHKIIELHDRYRTRSRIDSGYYSNLQSFEDDVASGLSSSNFDLESNNIATNDNRAGLSES 318
           R+K  E   R R+R     GY S    F  D+  G SS NFDL S N  +ND R+GL E+
Sbjct: 31  RYKTSEFMVRLRSRF---GGYTSINDHFVRDLEDGFSSQNFDLTSAN--SNDTRSGLDEA 85

Query: 319 AKLQIKKIMEEKGVSFDDARLEYTRNELSKNNIDENGVPRDPKLVMF 459
           +K +I++IMEE+G+ FD ARL YT  +   + I  +G+P DPK+V F
Sbjct: 86  SKQEIRRIMEEQGLGFDQARLVYTTRKFGAHGIAPDGMPLDPKVVTF 132


>Q8J0N0|YCL012C|Q8J0N0 (TrEMBL: Saccharomyces paradoxus (Yeast))
           YCL012Cp.
          Length = 133

 Score = 80.1 bits (196), Expect = 8e-15
 Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
 Frame = +1

Query: 142 HKIIELHDRYRT-RSRIDSGYYSNLQ---SFEDDVASGLSSSNFDLESNNIATNDNRAGL 309
           H+  ++ D++R  RSRI S +   ++   SF DD+ +GL S NFD+ S N  +ND R GL
Sbjct: 24  HRKTKVADKFRALRSRIQSRFNRRIRLNDSFADDLENGLHSRNFDIISEN--SNDARGGL 81

Query: 310 SESAKLQIKKIMEEKGVSFDDARLEYTRNELSKNNIDENGVPRDPKLVMF 459
            + +K +IKKIME   + FD ARL Y   +  +N I  +G P DPK   F
Sbjct: 82  DDISKNEIKKIMENDNIDFDKARLLYMEKKFGQNGIAPDGTPIDPKAFTF 131


>Q8J0M6|YCL012C|Q8J0M6 (TrEMBL: Saccharomyces bayanus (Yeast)
           (Saccharomyces uvarum)) YCL012Cp.
          Length = 132

 Score = 79.3 bits (194), Expect = 1e-14
 Identities = 46/106 (43%), Positives = 62/106 (58%)
 Frame = +1

Query: 142 HKIIELHDRYRTRSRIDSGYYSNLQSFEDDVASGLSSSNFDLESNNIATNDNRAGLSESA 321
           +K  EL  R+++R    + + S   SF DD+ SGL SSNFD+ S N   ND R GL + +
Sbjct: 31  NKFRELRSRFQSRF---NRHISLNDSFTDDLESGLHSSNFDIISEN--NNDTRGGLDDIS 85

Query: 322 KLQIKKIMEEKGVSFDDARLEYTRNELSKNNIDENGVPRDPKLVMF 459
           K +IK+IME   +SFD ARL Y   +  +N I  +G P DPK   F
Sbjct: 86  KNEIKQIMEMNNISFDKARLLYMERKFGQNGIAPDGTPIDPKAFTF 131


>Q8J0M4|YCL012C|Q8J0M4 (TrEMBL: Saccharomyces cerevisiae (Baker's
           yeast)) YCL012Cp (Fragment).
          Length = 116

 Score = 76.6 bits (187), Expect = 9e-14
 Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
 Frame = +1

Query: 142 HKIIELHDRYRT-RSRIDSGYYSNLQ---SFEDDVASGLSSSNFDLESNNIATNDNRAGL 309
           H+  ++ D++R  RSRI   +  +++   SF DD+ +GL S NFD+ S N  +ND R GL
Sbjct: 6   HRKTKVADKFRALRSRIQLRFNRHIRLNDSFADDLENGLHSRNFDIISEN--SNDVRGGL 63

Query: 310 SESAKLQIKKIMEEKGVSFDDARLEYTRNELSKNNIDENGVPRDPKLVMF 459
            + +K +IK+IME   V FD ARL Y   +  +N I  +G P DPK   F
Sbjct: 64  DDVSKNEIKQIMENDNVDFDKARLLYMERKFGQNGIAPDGTPIDPKAFTF 113


>O14068|SPAC1687.07|YFF7_SCHPO (SP: Schizosaccharomyces pombe
           (Fission yeast)) Hypothetical protein C1687.07 in
           chromosome I.
          Length = 124

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
 Frame = +1

Query: 181 SRIDSGYYSNLQ-SFEDDVASGLSSSNFDLESNNIATNDNRAGLSESAKLQIKKIMEEKG 357
           SR  S  YS ++ SFE D  +GL+SS+FD+ + NI   D RAGL E+A  QI+ +M++  
Sbjct: 31  SRYRSIRYSPVENSFEADFNNGLNSSSFDI-AQNILAQDTRAGLDEAATSQIRGLMKQLQ 89

Query: 358 VSFDDARLEYTRNELSKNNIDENGVPRDPKLV 453
            SFD ARL Y R  +S NN+D  G+P D K V
Sbjct: 90  CSFDQARLIYIRKVMSDNNVDSTGMPLDNKAV 121


>Q8J0M8||Q8J0M8 (TrEMBL: Cryptococcus neoformans var. grubii)
           Aycl012.
          Length = 133

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
 Frame = +1

Query: 133 HFRHKIIELHDRYRTRSRIDS-GYYSNLQS--FEDDVASGLSSSNFDLESN-NIATNDNR 300
           ++R ++  L  R+   + ++   +Y+ L+S  F D   +G+SS NFDLE+N    + + R
Sbjct: 20  YYRARLFSLAARFLPDTIVNRLSHYTPLESYSFADQAEAGMSSGNFDLEANIGEGSGEGR 79

Query: 301 AGLSESAKLQIKKIMEEKGVSFDDARLEYTRNELSKNNIDENGVPRDPKLV 453
            GL E+   ++++IM  +  +FD ARL      L+KN I  +G P D K +
Sbjct: 80  LGLDEAGVEEVRRIMAIERCTFDQARLIRHNRILAKNGIAPDGTPLDRKAI 130


>Q8IJ80|PF10_0319|Q8IJ80 (TrEMBL: Plasmodium falciparum (isolate
           3D7)) Hypothetical protein.
          Length = 553

 Score = 37.4 bits (85), Expect = 0.059
 Identities = 22/79 (27%), Positives = 37/79 (46%)
 Frame = +1

Query: 199 YYSNLQSFEDDVASGLSSSNFDLESNNIATNDNRAGLSESAKLQIKKIMEEKGVSFDDAR 378
           YY+N    +D++     + N D   NN   NDN   + E+A +    + EEK +  ++  
Sbjct: 77  YYNNYNDKDDNI--NYYNIN-DEHINNNENNDNIYNVKENAHINHDTLYEEKYIQKEEGT 133

Query: 379 LEYTRNELSKNNIDENGVP 435
           + +  N     NI+EN  P
Sbjct: 134 INHINNNTDMENINENNSP 152


>Q8IB67|GCN5|Q8IB67 (TrEMBL: Plasmodium falciparum (isolate 3D7))
            Histone acetyltransferase Gcn5, putative.
          Length = 1484

 Score = 34.3 bits (77), Expect = 0.50
 Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
 Frame = +1

Query: 205  SNLQSFEDDVASG--LSSSNFDLES--NNIATNDNRAGLSESAKLQIKKIMEEK--GVSF 366
            +N+   ED+      +   N+ LE   N   TN+N   + +  +L +KKI E+K   +  
Sbjct: 762  NNINDLEDNKKDDGHVDKQNYSLEKKDNEEHTNNNSDPIMDGVELDVKKISEKKEDQIEK 821

Query: 367  DDARLEYTRNELSKNNIDEN-------GVPRDPK 447
            D  + + T+N+ +K + ++N        +P+ PK
Sbjct: 822  DKPKNDNTKNDNTKEDKNQNDDNKTNTSIPKTPK 855


>Q8I1R5|PFD0835C|Q8I1R5 (TrEMBL: Plasmodium falciparum (isolate
           3D7)) Hypothetical protein.
          Length = 802

 Score = 34.3 bits (77), Expect = 0.50
 Identities = 21/93 (22%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
 Frame = +1

Query: 142 HKIIELHDRYRTRSRIDSGYYSNLQ--SFEDDVASGLSSSNFDLESNNIATNDNRAGLSE 315
           H I+++HD  +    + +G  +N +  S  +++ +  +++N +  +NN   +DN   +  
Sbjct: 599 HAIMDIHDEEKKNQNLQNGNNNNNKGTSNNNNINNNNNNNNNNNNNNNNNHSDNNNNIPH 658

Query: 316 SAKLQIK-KIMEEKGVSFDDARLEYTRNELSKN 411
           S+ +  K K+++E     DD +++    E+ KN
Sbjct: 659 SSHIDDKQKLIQEAKEKLDDLKMK--EQEIKKN 689


>Q8XIV0|CPE2013|Q8XIV0 (TrEMBL: Clostridium perfringens)
           Hypothetical protein CPE2013.
          Length = 208

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 14/47 (29%), Positives = 31/47 (65%)
 Frame = +1

Query: 313 ESAKLQIKKIMEEKGVSFDDARLEYTRNELSKNNIDENGVPRDPKLV 453
           E +K++ +K+MEEK  SF+D + ++ ++ + K N+    + +D K++
Sbjct: 47  EESKVEEEKVMEEKAESFEDIK-KFLKDLIDKGNVSRIRILKDEKVL 92


>Q8MMZ9||Q8MMZ9 (TrEMBL: Dictyostelium discoideum (Slime mold))
            Hypothetical protein.
          Length = 2625

 Score = 32.3 bits (72), Expect = 1.9
 Identities = 19/81 (23%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
 Frame = +1

Query: 184  RIDSGYYSNLQSFEDDVASGLSSSNFDLESNNIATNDNRAGLSESAKLQIKKIMEEKGVS 363
            ++++ +YS + +F +D  +  +++N +  +NN   N+N    +E+ K + ++  +E+ + 
Sbjct: 1462 KLNTQWYSRISNFFNDSTNNNNNNNNNNNNNNNNNNNNNTTSNENPKDKEEEKEQEEEIE 1521

Query: 364  FDDARL-EYTRNELSKNNIDE 423
             +  R  E  + EL KN  +E
Sbjct: 1522 EEKRRKEEEIKKELLKNREEE 1542


>Q8IDL6|MAL13P1.243|Q8IDL6 (TrEMBL: Plasmodium falciparum (isolate
           3D7)) Elongation factor Tu, putative.
          Length = 1394

 Score = 32.3 bits (72), Expect = 1.9
 Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
 Frame = +1

Query: 157 LHDRYRTRSRIDSGYYSNLQSFE---DDVASGLSSSNFDLESNNIATNDNRAGLSESAKL 327
           +++ +     ID+    N++S +   +D+ S    SN D++SN+I +ND ++   +S  +
Sbjct: 103 IYNEHAVERNIDNKIKDNIKSNDIKSNDIQSNDIKSN-DIQSNDIQSNDKQSNDKQSNDI 161

Query: 328 QIKKIMEEKGVSFDDARLEYTRNELSKNNIDE-NGVPRDPK 447
           Q   I      S D   ++ + N ++ +NI+    +P++ K
Sbjct: 162 QSNDIQSNDKQSND---IKSSDNIINSDNINSGQNIPKEEK 199


>Q88HI4|PP3373|Q88HI4 (TrEMBL: Pseudomonas putida (strain KT2440))
           Bacterial surface antigen family protein.
          Length = 787

 Score = 32.3 bits (72), Expect = 1.9
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
 Frame = +1

Query: 175 TRSRIDSGYYSNLQSFED------DVASGLSSSNFDLESNN-IATNDNRAGLSESAKLQI 333
           TRS   +G++ ++Q   D      +V    S S+ ++E N  I+T D   GL +S   + 
Sbjct: 62  TRSLFKTGFFQDIQLSRDGNVLIINVVERPSVSSIEIEGNKAISTEDLMKGLKQSGLAE- 120

Query: 334 KKIMEEKGVSFDDARLEYTRNELSKNNI 417
                  G  F  A LE  RNEL +  +
Sbjct: 121 -------GEIFQRATLEGVRNELQRQYV 141


>Q88MH2|PP1599|Q88MH2 (TrEMBL: Pseudomonas putida (strain KT2440))
           Outer membrane protein, bacterial surface antigen
           family.
          Length = 786

 Score = 32.3 bits (72), Expect = 1.9
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
 Frame = +1

Query: 175 TRSRIDSGYYSNLQSFED------DVASGLSSSNFDLESNN-IATNDNRAGLSESAKLQI 333
           TRS   +G++ ++Q   D      +V    S S+ ++E N  I+T D   GL +S   + 
Sbjct: 62  TRSLFKTGFFQDIQLSRDGNVLIINVVERPSVSSIEIEGNKAISTEDLMKGLKQSGLAE- 120

Query: 334 KKIMEEKGVSFDDARLEYTRNELSKNNI 417
                  G  F  A LE  RNEL +  +
Sbjct: 121 -------GEIFQRATLEGVRNELQRQYV 141


>Q8I5M9|PFL0865W|Q8I5M9 (TrEMBL: Plasmodium falciparum (isolate
           3D7)) Hypothetical protein.
          Length = 483

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
 Frame = +1

Query: 148 IIELHDRYRTRSRIDSGYYSNL-----QSFEDDVASGLSSSNFDLESNNIATNDNRAGLS 312
           I+++   Y+  S I  G+ +N      Q     + + ++S +  L SNNIA+ DN   +S
Sbjct: 143 ILDMMQSYQ--SSIAPGFDNNQNNATNQQNNQSIQNNIASQDNTLISNNIASQDNTL-IS 199

Query: 313 ESAKLQIKKIMEEKGVSFDDARLEYTRNELSKNN 414
            +   +  K+MEEK  S  D  +   +N  S  N
Sbjct: 200 NNISCKTLKLMEEKTSSI-DGNMNNIKNMSSNEN 232


>Q8I5I1|PFL1135C|Q8I5I1 (TrEMBL: Plasmodium falciparum (isolate
           3D7)) Hypothetical protein.
          Length = 1560

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
 Frame = +1

Query: 187 IDSGYYSNLQSFEDDVASGLSSSNFDLESNNIATN---DNRAG-LSESAKLQIKKIMEEK 354
           I++ +Y NL++F D+ +  ++ ++ D+  NN   N   DN    L +  KL+ ++     
Sbjct: 4   IENAHYQNLENFNDETSEDVNDTSDDINKNNDDNNKYDDNNVNVLDDKNKLENEEDNNNN 63

Query: 355 -GVSFDDARLEYTRNELSKNNI 417
             +    + L Y R +  K NI
Sbjct: 64  DNMMIFSSILRYQRYKTKKGNI 85


>Q8IIQ7|PF11_0111|Q8IIQ7 (TrEMBL: Plasmodium falciparum (isolate
           3D7)) Asparagine-rich antigen.
          Length = 1483

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = +1

Query: 262 DLESNNIATNDNRAGLSESAKLQIKKIMEEKGVSFDDARLEYTRNELSKNNIDENGVPRD 441
           +LESNN++ N N A L+ S       ++ +     ++ ++    N+    N+D N + RD
Sbjct: 617 NLESNNMSGNKNLANLNHSGNTNSNNMVND----MNNKKMNNVNNKNFNKNMDNNNITRD 672


>Q869R4||Q869R4 (TrEMBL: Dictyostelium discoideum (Slime mold))
           Similar to streptococcus pneumoniae. cell wall surface
           anchor family protein.
          Length = 1806

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
 Frame = +1

Query: 238 SGLSSSNFDLESNNIATNDNRAGLSESAKLQIKKIMEEKGVSFDDARL-------EYTRN 396
           S  +++N +  SNN   N+N+  +S+     + K+    G++FD + L        Y  N
Sbjct: 124 SNNNTNNQNNNSNNNNNNNNKINISDDYDSNLSKVKVPSGINFDTSSLSVADLTRSYQTN 183

Query: 397 ELSKNNIDENGV 432
             +KN +D   +
Sbjct: 184 ISNKNILDNKPI 195


>P02401|RPLP2|RLA2_RAT (SP: Rattus norvegicus (Rat)) 60S acidic
           ribosomal protein P2.
          Length = 115

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +1

Query: 304 GLSESAKLQIKKIMEEKGVSFDDARLEYTRNELSKNNIDE 423
           G S  +   IKKI++  G+  DD RL    +EL+  NI++
Sbjct: 14  GNSNPSAKDIKKILDSVGIEADDERLNKVISELNGKNIED 53


>Q88YW3|LP_0628|Q88YW3 (TrEMBL: Lactobacillus plantarum) Prophage
           Lp1 protein 5.
          Length = 348

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
 Frame = +1

Query: 133 HFRHKIIELHDRYRTRSRIDSGYYSNLQSFEDDVASGLSSSNFDLESN-NIATNDNRAGL 309
           H R +I +      T ++  + Y ++L   + D     SSS+ +  S+ NI  ND+   L
Sbjct: 175 HVRKQIKKTKPYTLTLTKAQADYQNSLDGSKKDSKKASSSSSKETSSSSNIDKNDDSESL 234

Query: 310 SESAKLQIKKIMEEKGVSFDDARLEYTRNELSKNNIDENGV 432
           S S           K  S D A LE  ++  ++ N+ + GV
Sbjct: 235 SSSN----SSTSSSKVSSEDKAALEKAQDYATEMNMSKQGV 271


>Q97FK1|SBCC|SBCC_CLOAB (SP: Clostridium acetobutylicum) Nuclease
            sbcCD subunit C.
          Length = 1163

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 25/90 (27%), Positives = 43/90 (47%)
 Frame = +1

Query: 145  KIIELHDRYRTRSRIDSGYYSNLQSFEDDVASGLSSSNFDLESNNIATNDNRAGLSESAK 324
            K+ E+ D+YR  S     Y+SNL S +D   +       D++  N    + +    E AK
Sbjct: 844  KMNEIEDKYRKCSDEIIKYHSNLSSLKDRKVN-------DIDKLNKILMEEKFENIEKAK 896

Query: 325  LQIKKIMEEKGVSFDDARLEYTRNELSKNN 414
               +  + +K ++   + +E  +NELSK N
Sbjct: 897  ---ENYLNDKEINLLKSDVEKYKNELSKVN 923


>Q886N5|PSPTO1542|Q886N5 (TrEMBL: Pseudomonas syringae (pv. tomato))
           Outer membrane protein.
          Length = 795

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
 Frame = +1

Query: 175 TRSRIDSGYYSNLQSFED------DVASGLSSSNFDLESNN-IATNDNRAGLSESAKLQI 333
           TRS   +G++ ++Q   D      +V    S ++ ++E N  I+T D   GL +S   + 
Sbjct: 62  TRSLFKTGFFQDIQLGRDGNVLVINVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAE- 120

Query: 334 KKIMEEKGVSFDDARLEYTRNELSKNNI 417
                  G  F  A LE  RNEL +  +
Sbjct: 121 -------GEIFQRATLEGVRNELQRQYV 141


>Q9CQ99|RPLP2|Q9CQ99 (TrEMBL: Mus musculus (Mouse)) 2700049I22Rik
           protein (RIKEN cDNA 2700049I22 gene) (Ribosomal
           protein).
          Length = 115

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +1

Query: 310 SESAKLQIKKIMEEKGVSFDDARLEYTRNELSKNNIDE 423
           S SAK  IKKI++  G+  DD RL    +EL+  NI++
Sbjct: 17  SPSAK-DIKKILDSVGIEADDDRLNKVISELNGKNIED 53


>P05387|RPLP2|RLA2_HUMAN (SP: Homo sapiens (Human)) 60S acidic
           ribosomal protein P2.
          Length = 115

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +1

Query: 310 SESAKLQIKKIMEEKGVSFDDARLEYTRNELSKNNIDE 423
           S SAK  IKKI++  G+  DD RL    +EL+  NI++
Sbjct: 17  SPSAK-DIKKILDSVGIEADDDRLNKVISELNGKNIED 53


>Q97BN4|TV0421|Q97BN4 (TrEMBL: Thermoplasma volcanium) Ribosomal
           protein large subunit P2.
          Length = 104

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +1

Query: 328 QIKKIMEEKGVSFDDARLEYTRNELSKNNIDE 423
           ++KK++E+ GV  D+ARL+   + L   NIDE
Sbjct: 21  KLKKVLEDVGVQVDEARLKTLVSGLKDVNIDE 52


>Q9HL72|TA0358|Q9HL72 (TrEMBL: Thermoplasma acidophilum) Probable
           50S ribosomal protein L12.
          Length = 106

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +1

Query: 328 QIKKIMEEKGVSFDDARLEYTRNELSKNNIDE 423
           ++KK++E+ GV  D+ARL+   + L   NIDE
Sbjct: 21  KLKKVLEDVGVQVDEARLKTLVSGLKDVNIDE 52


>Q86IG9||Q86IG9 (TrEMBL: Dictyostelium discoideum (Slime mold))
           Hypothetical protein.
          Length = 566

 Score = 30.4 bits (67), Expect = 7.2
 Identities = 16/56 (28%), Positives = 30/56 (53%)
 Frame = +1

Query: 187 IDSGYYSNLQSFEDDVASGLSSSNFDLESNNIATNDNRAGLSESAKLQIKKIMEEK 354
           I+  Y+S+   +EDD     ++++ +  SNN + N+N    S S+    + I EE+
Sbjct: 121 INHDYHSSEDEYEDDEDEDENNNSVNNNSNNNSNNNNNNNTSISSAHSCESIAEEE 176


>Q8T145||Q8T145 (TrEMBL: Dictyostelium discoideum (Slime mold))
           Similar to ATP-dependent RNA helicase, putative; protein
           id: At1g35530.1.
          Length = 1789

 Score = 30.4 bits (67), Expect = 7.2
 Identities = 17/91 (18%), Positives = 44/91 (48%)
 Frame = +1

Query: 169 YRTRSRIDSGYYSNLQSFEDDVASGLSSSNFDLESNNIATNDNRAGLSESAKLQIKKIME 348
           YR ++      Y+N  +  ++  +  +++N +  +NN   N+N   ++   ++++     
Sbjct: 154 YRQQTEQQQSVYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNPIEIEL----- 208

Query: 349 EKGVSFDDARLEYTRNELSKNNIDENGVPRD 441
                 DD  L ++ + L+KN+ + +  P+D
Sbjct: 209 ------DDFELSFSDDILNKNSGESSSAPKD 233


>P41889|CUT9|CUT9_SCHPO (SP: Schizosaccharomyces pombe (Fission
           yeast)) Protein cut9.
          Length = 671

 Score = 30.4 bits (67), Expect = 7.2
 Identities = 18/86 (20%), Positives = 40/86 (46%)
 Frame = +1

Query: 154 ELHDRYRTRSRIDSGYYSNLQSFEDDVASGLSSSNFDLESNNIATNDNRAGLSESAKLQI 333
           +L  R    + + SG+ ++   FED+V+  +  SN +    +++  D    ++ES     
Sbjct: 588 DLLKRALEENSLTSGFLNSKYVFEDEVSEYMQQSNLNTSDKSMSMEDQSGKVTES----- 642

Query: 334 KKIMEEKGVSFDDARLEYTRNELSKN 411
             + +   V + D+R E   +++  N
Sbjct: 643 --VNDRTQVLYADSRSEMMMDDIEGN 666


>Q8TZC6|RPP1A|Q8TZC6 (TrEMBL: Methanopyrus kandleri) Ribosomal
           protein L12E/L44/L45.
          Length = 105

 Score = 30.4 bits (67), Expect = 7.2
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 331 IKKIMEEKGVSFDDARLEYTRNELSKNNIDE 423
           ++K++E  GV  DDARL+ T   L + +IDE
Sbjct: 22  LRKVLEAAGVDVDDARLKATVAALEEVDIDE 52


  Database: sptrembl
    Posted date:  Oct 14, 2003  6:47 PM
  Number of letters in database: 339,323,595
  Number of sequences in database:  1,070,300
  
Lambda     K      H
   0.313    0.131    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,483,834
Number of Sequences: 1070300
Number of extensions: 2659667
Number of successful extensions: 6835
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6808
length of database: 339,323,595
effective HSP length: 110
effective length of database: 221,590,595
effective search space used: 9306804990
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)