BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Candida_albicans_chr7-r2-52855-51707-10
         (1146 letters)

Database: sptrembl 
           1,070,300 sequences; 339,323,595 total letters

Searching.................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

P32579|SUA5|SUA5_YEAST (SP: Saccharomyces cerevisiae (Baker's ye...   400   e-110
O94530|SPCC895.03C|O94530 (TrEMBL: Schizosaccharomyces pombe (Fi...   372   e-102
Q9UYB2|PYRAB15960|Q9UYB2 (TrEMBL: Pyrococcus abyssi) SUA5 relate...   263   4e-69
O73972|PH0435|O73972 (TrEMBL: Pyrococcus horikoshii) Hypothetica...   252   7e-66
Q9K6F8|BH3771|Q9K6F8 (TrEMBL: Bacillus halodurans) Hypothetical ...   251   9e-66
Q8Y4B0|LMO2541|Q8Y4B0 (TrEMBL: Listeria monocytogenes) Hypotheti...   247   2e-64
Q927V2|LIN2685|Q927V2 (TrEMBL: Listeria innocua) Hypothetical pr...   246   3e-64
Q8U3Z4|PF0306|Q8U3Z4 (TrEMBL: Pyrococcus furiosus) Sua5 superfam...   245   6e-64
Q814U4|BC5325|Q814U4 (TrEMBL: Bacillus cereus (strain ATCC 14579...   244   1e-63
Q81JX5|BA5568|Q81JX5 (TrEMBL: Bacillus anthracis (strain Ames)) ...   239   3e-62
Q9UX54|SSO0664|Q9UX54 (TrEMBL: Sulfolobus solfataricus) Hypothet...   239   5e-62
P39153|YWLC|YWLC_BACSU (SP: Bacillus subtilis) Hypothetical prot...   237   2e-61
Q898Y2|CTC00305|Q898Y2 (TrEMBL: Clostridium tetani) SUA5 protein.     230   3e-59
Q970S6|ST1526|Q970S6 (TrEMBL: Sulfolobus tokodaii) Hypothetical ...   228   8e-59
Q8RD96|SUA5|Q8RD96 (TrEMBL: Thermoanaerobacter tengcongensis) Pu...   228   8e-59
Q8EM64|OB2994|Q8EM64 (TrEMBL: Oceanobacillus iheyensis) Hypothet...   224   2e-57
Q97F70|CAC2882|Q97F70 (TrEMBL: Clostridium acetobutylicum) Predi...   221   1e-56
Q88UT4|LP_2376|Q88UT4 (TrEMBL: Lactobacillus plantarum) SUA5 fam...   219   6e-56
Q831F8|EF2552|Q831F8 (TrEMBL: Enterococcus faecalis (Streptococc...   218   8e-56
Q9WZV6|TM0852|Q9WZV6 (TrEMBL: Thermotoga maritima) Hypothetical ...   218   1e-55
Q8XIC1|CPE2200|Q8XIC1 (TrEMBL: Clostridium perfringens) Hypothet...   213   5e-54
Q9Y988|APE2397|Q9Y988 (TrEMBL: Aeropyrum pernix) 367AA long hypo...   211   1e-53
Q978U4|TV1321|Q978U4 (TrEMBL: Thermoplasma volcanium) Hypothetic...   211   2e-53
Q8CRN1|SE1713|Q8CRN1 (TrEMBL: Staphylococcus epidermidis) Conser...   205   9e-52
Q8ZU26|PAE2978|Q8ZU26 (TrEMBL: Pyrobaculum aerophilum) Sua5 fami...   202   6e-51
Q8STM6|ECU09_1610|Q8STM6 (TrEMBL: Encephalitozoon cuniculi) Hypo...   201   1e-50
Q8NVG7|MW2040|Q8NVG7 (TrEMBL: Staphylococcus aureus (strain MW2)...   198   9e-50
Q9HLC7|TA0302|Q9HLC7 (TrEMBL: Thermoplasma acidophilum) Sua5 rel...   197   2e-49
Q99SE2|SAV2116|Q99SE2 (TrEMBL: Staphylococcus aureus (strain N31...   196   6e-49
Q8KBR8|CT1715|Q8KBR8 (TrEMBL: Chlorobium tepidum) SUA5/YciO/YrdC...   194   2e-48

>P32579|SUA5|SUA5_YEAST (SP: Saccharomyces cerevisiae (Baker's yeast))
            SUA5 protein.
          Length = 426

 Score =  400 bits (1027), Expect = e-110
 Identities = 235/404 (58%), Positives = 278/404 (68%), Gaps = 42/404 (10%)
 Frame = +1

Query: 34   FTTRILKVRPESIQFVNDK------PQISDNETLINLEIAAKELTTTHNAIGFPTETVYG 195
            F T+ILKV P SI F  D       P I+D ET   L  AA+ +  T   + FPTETVYG
Sbjct: 16   FDTKILKVNPLSIIFSPDAHIDGSLPTITDPETEAALVEAARIIRDTDETVAFPTETVYG 75

Query: 196  LAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKLINY----------EIPQVYL 345
            L GSAL+D SV SIY+AKNRP+DNPLI H+SSI+QL RK+ N            IP +Y 
Sbjct: 76   LGGSALNDNSVLSIYRAKNRPSDNPLITHVSSIDQLNRKVFNQPHLSGTSLFDNIPSIYR 135

Query: 346  DLISHFWPGPLTILLPI--TKDSPISKLVTANQDTFAVRMPNHPVARALIAMSDTPIAAP 519
             LIS  WPGPLTILLP+  ++ S +SKL TA+Q TFAVR+P +PVARALIA+SDTPIAAP
Sbjct: 136  PLISSLWPGPLTILLPVPSSEHSALSKLTTADQPTFAVRIPANPVARALIALSDTPIAAP 195

Query: 520  SANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLLRPGGVSLE 699
            SANASTRPSPTLA HVYHDL  KIP+ILDGGAC VGVESTV+DGL +PP LLRPGG + E
Sbjct: 196  SANASTRPSPTLASHVYHDLKDKIPIILDGGACKVGVESTVVDGLCNPPTLLRPGGFTYE 255

Query: 700  DIKRVGGKLWENIVVA-KKTAGKLEPVKTPGMKYRHYSPTAKVVLFV-NC-GDGI----N 858
            +I ++GG+ W    V  KKT  K E V+TPGMKYRHYSP+AKVVL V +C GDGI    +
Sbjct: 256  EIVKLGGEAWSLCKVENKKTVEKGEKVRTPGMKYRHYSPSAKVVLLVPHCEGDGILKGVD 315

Query: 859  AIENYL----TNNKVDASTTKIAL----------LKSKHFGE---DHPHFIIKRLGTTGN 987
             +E       T  K +++  KIA+          L+SK F E       FII+RLG +G 
Sbjct: 316  RMERLKRLIETELKANSNIKKIAILTSLKLRDSDLQSKIFNEPDFSSKTFIIERLGQSGE 375

Query: 988  EISHNLFKYLREVDEEDKVELIFVEGIDETNEGLAVMNRLSKAA 1119
            EI  NLF  LR+VDE DKV+LIFVEGI+E  EGLAVMNRL KAA
Sbjct: 376  EIQTNLFAALRKVDENDKVDLIFVEGINEEGEGLAVMNRLRKAA 419


>O94530|SPCC895.03C|O94530 (TrEMBL: Schizosaccharomyces pombe (Fission
            yeast)) Similarity to yeast translation initiation
            protein Sua5p.
          Length = 408

 Score =  372 bits (954), Expect = e-102
 Identities = 206/382 (53%), Positives = 261/382 (68%), Gaps = 28/382 (7%)
 Frame = +1

Query: 76   FVNDKPQISDNETLINLEIAAKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNR 255
            F + +  I  +ET   LE AA  L  T   + FPTETVYGL   A   E+V SIYKAKNR
Sbjct: 26   FEHTRVSIPPSETRSALENAANILRNTDYPVAFPTETVYGLGADARRTEAVLSIYKAKNR 85

Query: 256  PADNPLIVHISSIEQLKRKLINYE-----------------IPQVYLDLISHFWPGPLTI 384
            PADNPLIVH++S++QL+R L++                   IP+VYL LI  FWPGPL+I
Sbjct: 86   PADNPLIVHVASLDQLRRLLLSAYPKAKSEVKNQAHDSEEIIPKVYLPLIKKFWPGPLSI 145

Query: 385  LLPITKDS--PISKLVTANQDTFAVRMPNHPVARALIAMSDTPIAAPSANASTRPSPTLA 558
            LLP+  ++  P+S +VTA Q TFAVRMP HPVA ALI++SD+P+AAPSANASTRPSPTLA
Sbjct: 146  LLPVVDEANPPVSPIVTAGQKTFAVRMPQHPVALALISISDSPLAAPSANASTRPSPTLA 205

Query: 559  EHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLLRPGGVSLEDIKRVGGKLWE-- 732
            +HVY+DL GKIPLILDGGAC VGVESTV++GL DPP++LRPGG+SLE+I+  GG  WE  
Sbjct: 206  KHVYNDLQGKIPLILDGGACGVGVESTVVNGLCDPPVILRPGGISLEEIQSSGG-AWERT 264

Query: 733  NIVVAKKTAGKLEPV-KTPGMKYRHYSPTAKVVLFVNC--GDGINAIENYLTNNKVDAST 903
             + VAKK+  + + + +TPGMKYRHYSPTAKV+LFVN    D     E YL+   +    
Sbjct: 265  KVFVAKKSDMETDFIPQTPGMKYRHYSPTAKVLLFVNYTESDAYGVFEKYLSEQGITKEK 324

Query: 904  TKIALLKSKHFGED----HPHFIIKRLGTTGNEISHNLFKYLREVDEEDKVELIFVEGID 1071
             KI +L SK + E+    H  F+   +G  G+EI+ NLF  LR++D +  V+ + VEG+ 
Sbjct: 325  QKIGVLCSKRWNEESFPSHCPFVFLHMGRDGHEITKNLFAQLRDLDLQG-VDFVLVEGVS 383

Query: 1072 ETNEGLAVMNRLSKAAMEVVNG 1137
            E NEGLA+MNRL KAA  V  G
Sbjct: 384  EENEGLAIMNRLGKAASVVFEG 405


>Q9UYB2|PYRAB15960|Q9UYB2 (TrEMBL: Pyrococcus abyssi) SUA5 related
            protein.
          Length = 340

 Score =  263 bits (671), Expect = 4e-69
 Identities = 150/319 (47%), Positives = 205/319 (64%), Gaps = 1/319 (0%)
 Frame = +1

Query: 166  IGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKLINYEIPQVYL 345
            + FPTETVYGL  +AL + +VK I++AK RPADNPLI+HI+S EQL+  ++  EIP+   
Sbjct: 29   VAFPTETVYGLGANALDENAVKRIFEAKGRPADNPLIIHIASFEQLE--VLAKEIPEEAE 86

Query: 346  DLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAMSDTPIAAPSA 525
             L   FWPGPLT++LP  K   + +++T   DT AVRMP H +A  LI +S+ PIAAPSA
Sbjct: 87   MLAKRFWPGPLTLVLP--KSEVVPRVITGGLDTVAVRMPAHEIALKLIELSERPIAAPSA 144

Query: 526  NASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLLRPGGVSLEDI 705
            N S +PSPT A HV  D  GKI  I+DGG   +GVESTVID    PP+LLRPGG+ LE+I
Sbjct: 145  NISGKPSPTSAHHVAEDFYGKIECIIDGGETRIGVESTVIDLTEWPPVLLRPGGLPLEEI 204

Query: 706  KRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGI-NAIENYLTN 882
            ++V G++  +  V  K+   ++  K PGMKYRHY+P+A+V++     D +   IE  +  
Sbjct: 205  EKVIGEIRIHPAVYGKS---VDTAKAPGMKYRHYAPSAEVIVVEGPRDKVRRKIEELIAK 261

Query: 883  NKVDASTTKIALLKSKHFGEDHPHFIIKRLGTTGNEISHNLFKYLREVDEEDKVELIFVE 1062
             K +    K+ ++ S  +  D   +    LG T  EI+ NLFK LR +D    V++I  E
Sbjct: 262  FKEEGK--KVGVIGSGSYDADEVFY----LGDTVEEIARNLFKALRHMDRTG-VDVILAE 314

Query: 1063 GIDETNEGLAVMNRLSKAA 1119
            G++E   GLAVMNRL KA+
Sbjct: 315  GVEEKGLGLAVMNRLRKAS 333


>O73972|PH0435|O73972 (TrEMBL: Pyrococcus horikoshii) Hypothetical
            protein PH0435.
          Length = 340

 Score =  252 bits (643), Expect = 7e-66
 Identities = 146/334 (43%), Positives = 208/334 (62%)
 Frame = +1

Query: 118  INLEIAAKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIE 297
            + L IAAK L      + FPTETVYGL   AL++ +V+ I++AK RPADNPLI+HI+   
Sbjct: 14   VKLRIAAK-LIREGKLVAFPTETVYGLGADALNERAVRRIFEAKGRPADNPLILHIAKFS 72

Query: 298  QLKRKLINYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVA 477
            Q+    +  E+P+    L+  FWPGPLTI+LP  +   +  + T   DT A+RMP + +A
Sbjct: 73   QVYE--LAREVPEEAKVLVERFWPGPLTIVLP--RKDVVPDVTTGGLDTVAIRMPANEIA 128

Query: 478  RALIAMSDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLV 657
              LI +S  PIAAPSAN S +PSPT AEHV  D  GKI  I+DGG   +GVESTVID   
Sbjct: 129  LKLIELSGKPIAAPSANISGKPSPTSAEHVADDFYGKIECIIDGGETRIGVESTVIDLTE 188

Query: 658  DPPMLLRPGGVSLEDIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFV 837
             PP+LLRPGG+ LE+I++V GK+  +  V  K   K++  K+PGMKY+HY+P A+V++  
Sbjct: 189  HPPVLLRPGGLPLEEIEKVIGKVRIHPAVFGK---KVDTPKSPGMKYKHYAPNAEVIVVE 245

Query: 838  NCGDGINAIENYLTNNKVDASTTKIALLKSKHFGEDHPHFIIKRLGTTGNEISHNLFKYL 1017
               + +      L   ++     K+ ++ S+ +  D   F    LG++  E++ NLFK L
Sbjct: 246  GPREKVKGKITELV-KELKERGKKVGVIGSESYNADEFFF----LGSSVEEVAKNLFKAL 300

Query: 1018 REVDEEDKVELIFVEGIDETNEGLAVMNRLSKAA 1119
            R +D+   V+++  EG++E   GLAVMNRL KA+
Sbjct: 301  RYMDKAG-VDVVIAEGVEERGLGLAVMNRLRKAS 333


>Q9K6F8|BH3771|Q9K6F8 (TrEMBL: Bacillus halodurans) Hypothetical
            protein BH3771.
          Length = 348

 Score =  251 bits (642), Expect = 9e-66
 Identities = 151/320 (47%), Positives = 203/320 (63%), Gaps = 2/320 (0%)
 Frame = +1

Query: 166  IGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKLINYEIPQVYL 345
            +  PTETVYGL  +ALSDE+V+ I+ AK RP+DNPLIVHIS  EQL R L+++ IP    
Sbjct: 37   VALPTETVYGLGANALSDEAVQKIFIAKGRPSDNPLIVHISRKEQLLR-LVSH-IPDSAN 94

Query: 346  DLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAMSDTPIAAPSA 525
             LI+ FWPGPLTI+ P  K   +S +VTA  DT AVRMP+HPVA+ALI  ++ PIAAPSA
Sbjct: 95   LLINAFWPGPLTIIFP--KGEEVSTVVTAGLDTVAVRMPSHPVAQALIEAANVPIAAPSA 152

Query: 526  NASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLLRPGGVSLEDI 705
            N S +PSPT A HV  DL GKI  ++DGG    GVESTVID    PP+L RPGGV+ E +
Sbjct: 153  NRSGKPSPTSATHVLADLRGKIAGVVDGGPTAEGVESTVIDCTTTPPILYRPGGVTREQL 212

Query: 706  KRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGINAIENYLTNN 885
            + V G     I +     GK E  K+PGMKY HY+P  ++ L  N      AI+ ++  +
Sbjct: 213  EAVLGP----IRIDPALLGKDEQPKSPGMKYTHYAPEGELTLVENQA----AIQTFV--D 262

Query: 886  KVDASTTKIALLKSKHFGEDHPHFIIKRLGTTGN--EISHNLFKYLREVDEEDKVELIFV 1059
            K      K+ ++ +    +D+   +I  +G+  +  E++HNL+  LR+ DE+ KV++I  
Sbjct: 263  KWREKQFKVGIMATDEHKQDYDADVILSVGSRNDLAEVAHNLYHVLRQFDEQ-KVDVIIG 321

Query: 1060 EGIDETNEGLAVMNRLSKAA 1119
            E       G+A+MNRL KAA
Sbjct: 322  ETFPREGIGVAIMNRLEKAA 341


>Q8Y4B0|LMO2541|Q8Y4B0 (TrEMBL: Listeria monocytogenes) Hypothetical
            protein lmo2541.
          Length = 345

 Score =  247 bits (631), Expect = 2e-64
 Identities = 148/341 (43%), Positives = 205/341 (60%), Gaps = 13/341 (3%)
 Frame = +1

Query: 136  AKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKL 315
            A +L      + FPTETVYGL   A +  +V+ IY+AK RP+DNPLIVHI+  EQ+ + +
Sbjct: 21   AAKLLQGGECVAFPTETVYGLGADATNQAAVQKIYEAKGRPSDNPLIVHIARREQMDQFV 80

Query: 316  INYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAM 495
             +Y  P   + L+  FWPGPLT++LP+ KDS ++  V+A   T  VRMP HPV+ ALI  
Sbjct: 81   ASY--PAKAIQLMEKFWPGPLTVILPLKKDS-LATNVSAGLSTVGVRMPEHPVSLALIGT 137

Query: 496  SDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLL 675
            ++ PIAAPSAN S +PSPT A HV  DL+GKI  I+DGGA  VG+ESTVID  ++ P++L
Sbjct: 138  ANIPIAAPSANRSGKPSPTTASHVIEDLDGKIAGIIDGGATGVGLESTVIDCSLEIPIIL 197

Query: 676  RPGGVSLEDIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGI 855
            RPGGV+ E I+++ G     + ++     + E  K PGMKY HY+P A V L       I
Sbjct: 198  RPGGVTKEQIEQIIGP----VDISTNNTKETEKPKAPGMKYTHYAPKAPVYL-------I 246

Query: 856  NAIENYLTN--NKVDASTTKIALLKSKHFGEDHPHFIIKRLGTTG-----------NEIS 996
                 +  +  NK +A+  K+ +L +K         +I +L T+G           +EI+
Sbjct: 247  EGSTQFWQSEINKAEAANKKLGILATKE--------LINQLNTSGTIETTGSIKALDEIA 298

Query: 997  HNLFKYLREVDEEDKVELIFVEGIDETNEGLAVMNRLSKAA 1119
             +L+K LR  D  D V++IF E   ET  G A+MNRL KAA
Sbjct: 299  TSLYKGLRAFDHAD-VDIIFAEVYPETELGAAIMNRLEKAA 338


>Q927V2|LIN2685|Q927V2 (TrEMBL: Listeria innocua) Hypothetical protein
            lin2685.
          Length = 345

 Score =  246 bits (629), Expect = 3e-64
 Identities = 146/331 (44%), Positives = 202/331 (61%), Gaps = 3/331 (0%)
 Frame = +1

Query: 136  AKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKL 315
            A EL      + FPTETVYGL   A +  +++ IY AK RP+DNPLIVHI+  EQ+ + +
Sbjct: 21   AAELLQNGECVAFPTETVYGLGADATNQAAIQKIYAAKGRPSDNPLIVHIAKREQMDQFI 80

Query: 316  INYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAM 495
             +Y  P   L L+  FWPGPLT++LP+ KDS ++  V+A   T  VRMP HPV+  LIA 
Sbjct: 81   ASY--PPKALQLMEAFWPGPLTVILPLKKDS-LAANVSAGLSTVGVRMPEHPVSLELIAT 137

Query: 496  SDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLL 675
            ++ PIAAPSAN S +PSPT AEHV  DL+G+I  I+DGG   VG+ESTVID  +D P++L
Sbjct: 138  ANIPIAAPSANRSGKPSPTTAEHVIEDLDGEIAGIIDGGPTGVGLESTVIDCSLDVPIIL 197

Query: 676  RPGGVSLEDIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGI 855
            RPGG+++E I++V G     + ++  +  + E  K PGMKY HY+P A V L        
Sbjct: 198  RPGGITIEQIEQVIG----TVDLSTNSTTETEKPKAPGMKYTHYAPKAPVYLVEGSSQFW 253

Query: 856  NAIENYLTNNKVDASTTKIALLKSKHF-GEDHPHFIIKRLGT--TGNEISHNLFKYLREV 1026
             +       NKV  +  K+ +L +K    +     +I+  G+    +EI+ +L+K LR  
Sbjct: 254  QS-----EINKVGIAGKKLGILATKELTSKLATSAVIQSTGSIKAMDEIATSLYKGLRAF 308

Query: 1027 DEEDKVELIFVEGIDETNEGLAVMNRLSKAA 1119
            D  D V++IF E   ET  G A+MNRL KAA
Sbjct: 309  DHAD-VDIIFAEVYPETELGAAIMNRLEKAA 338


>Q8U3Z4|PF0306|Q8U3Z4 (TrEMBL: Pyrococcus furiosus) Sua5
            superfamily-related protein.
          Length = 341

 Score =  245 bits (626), Expect = 6e-64
 Identities = 145/332 (43%), Positives = 205/332 (61%)
 Frame = +1

Query: 124  LEIAAKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQL 303
            L +AA+ L      + FPTETVYGL   AL++++ + I++AK RPADNPLIVHI+   Q+
Sbjct: 16   LRVAAR-LIREGKLVAFPTETVYGLGADALNEKAARRIFEAKGRPADNPLIVHIAEFSQV 74

Query: 304  KRKLINYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARA 483
                +  E+P+    L   FWPGPLTI+LP  +  P   + T   DT A+RMP + +A  
Sbjct: 75   YE--LAREVPEEAKMLAKKFWPGPLTIVLPRREIVP--DVTTGGLDTVAIRMPANEIALK 130

Query: 484  LIAMSDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDP 663
            LI +S  PIAAPSAN S +PSPT AEHV  D  GKI  I+DGG   +GVESTVID    P
Sbjct: 131  LIKLSGRPIAAPSANISGKPSPTTAEHVADDFYGKIECIIDGGETKIGVESTVIDLTEWP 190

Query: 664  PMLLRPGGVSLEDIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNC 843
            P+LLRPGG+ LE+I++V G++  +  V  K   K++  K+PGMKY+HY+P A+V++    
Sbjct: 191  PVLLRPGGLPLEEIEKVIGEVRIHPAVFGK---KVDVAKSPGMKYKHYAPDAEVIVVEGP 247

Query: 844  GDGINAIENYLTNNKVDASTTKIALLKSKHFGEDHPHFIIKRLGTTGNEISHNLFKYLRE 1023
             + +      L   +      ++ ++ S+ +  D   +    LG T  E++ NLFK LR 
Sbjct: 248  KEKVKRKIAELV-KEFKEKGKRVGVIGSESYNADEFFY----LGETVEEVARNLFKALRY 302

Query: 1024 VDEEDKVELIFVEGIDETNEGLAVMNRLSKAA 1119
            +D+  KV+++  EG++E   GLAVMNRL KAA
Sbjct: 303  MDKA-KVDIVLAEGVEEKGLGLAVMNRLRKAA 333


>Q814U4|BC5325|Q814U4 (TrEMBL: Bacillus cereus (strain ATCC 14579 /
            DSM 31)) SUA5 protein.
          Length = 346

 Score =  244 bits (623), Expect = 1e-63
 Identities = 145/330 (43%), Positives = 199/330 (60%), Gaps = 2/330 (0%)
 Frame = +1

Query: 136  AKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKL 315
            A +L   + A+ FPTETVYGL  +A+ DE++  I++AK RP+DNPLIVHI +  QL    
Sbjct: 24   AAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLDG-- 81

Query: 316  INYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAM 495
            I  EIP V   L++HFWPGPLTI+LP  +   IS+ VTA  +T  VRMP+HP+A ALI  
Sbjct: 82   IVKEIPPVAEKLMAHFWPGPLTIILP--RKEGISEKVTAGLNTVGVRMPDHPIALALIEE 139

Query: 496  SDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLL 675
            ++ P+AAPSAN S RPSPTLA HVY DLNGKI  I+DGGA  VGVESTVID     P +L
Sbjct: 140  ANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVGVESTVIDCTSTVPTIL 199

Query: 676  RPGGVSLEDIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGI 855
            RPGG++ E ++ V G     + +      + E  K+PGMKY HY+P A + +     +G 
Sbjct: 200  RPGGITKEQLEAVIG----TVSLDPALKDEKEKPKSPGMKYTHYAPKAPLSIV----EGS 251

Query: 856  NAIENYLTNNKVDASTTKIALLKSKHFGEDHPHFIIKRLGTTGN--EISHNLFKYLREVD 1029
                 +L + K      K+ +L ++ +   +   +I   G   +   ++  L+  LR  D
Sbjct: 252  REFIQHLVDEK-KKEGFKVGVLTTEEYQHVYSADVILSCGVRSDLASVATKLYDVLRTFD 310

Query: 1030 EEDKVELIFVEGIDETNEGLAVMNRLSKAA 1119
              + V++IF E       G A+MNRL+KAA
Sbjct: 311  ASE-VDVIFSESFPNEGIGNAIMNRLTKAA 339


>Q81JX5|BA5568|Q81JX5 (TrEMBL: Bacillus anthracis (strain Ames))
            Sua5/yciO/yrdC/ywlC family protein.
          Length = 346

 Score =  239 bits (611), Expect = 3e-62
 Identities = 145/330 (43%), Positives = 197/330 (59%), Gaps = 2/330 (0%)
 Frame = +1

Query: 136  AKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKL 315
            A +L   + AI FPTETVYGL  +A++DE++  I++AK RP+DNPLIVHI +  QL    
Sbjct: 24   AAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLDG-- 81

Query: 316  INYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAM 495
            I  EIP V   L+ HFWPGPLTI+LP  +   IS+ VTA   T  VRMP+HPVA ALI  
Sbjct: 82   IVKEIPPVAEKLMEHFWPGPLTIILP--RKEGISEKVTAGLHTVGVRMPDHPVALALIEE 139

Query: 496  SDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLL 675
            ++ P+AAPSAN S RPSPTLA HVY DLN KI  I+DGGA  VGVESTVID     P +L
Sbjct: 140  ANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVGVESTVIDCTSAVPTIL 199

Query: 676  RPGGVSLEDIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGI 855
            RPGG++ E ++ V G     + +      + E  K+PGMKY HY+P A + +     +G 
Sbjct: 200  RPGGITKEQLEAVIG----TVSLDPALKDEKEKPKSPGMKYTHYAPKAPLSIV----EGS 251

Query: 856  NAIENYLTNNKVDASTTKIALLKSKHFGEDHPHFIIKRLGTTGN--EISHNLFKYLREVD 1029
                  L + K +    K+ +L ++ +   +   ++   G   +   ++  L+  LR  D
Sbjct: 252  REFIQRLVDEKKEEG-FKVGVLTTEEYHHIYNADVVLSCGVRSDLASVATKLYDVLRTFD 310

Query: 1030 EEDKVELIFVEGIDETNEGLAVMNRLSKAA 1119
              + V++IF E       G A+MNRL+KAA
Sbjct: 311  ASE-VDVIFSESFPNEGIGNAIMNRLTKAA 339


>Q9UX54|SSO0664|Q9UX54 (TrEMBL: Sulfolobus solfataricus) Hypothetical
            SUA5 related protein SSO0664.
          Length = 358

 Score =  239 bits (610), Expect = 5e-62
 Identities = 148/324 (45%), Positives = 202/324 (62%), Gaps = 8/324 (2%)
 Frame = +1

Query: 172  FPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKLINYEIPQVYLDL 351
            FPTETVYGL  +AL  E+VK I+ AKNRP DNPLIVHIS+I+QL    +  +IP+  ++L
Sbjct: 32   FPTETVYGLGANALDPEAVKKIFIAKNRPMDNPLIVHISNIDQLYE--VAKDIPKKIINL 89

Query: 352  ISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAMSDTPIAAPSANA 531
            ++  WPGPLT +L  T+  P  K  T   +T AVRMP HPVA ALI  S  PIAAPSAN 
Sbjct: 90   VNIVWPGPLTFVLKKTEKVP--KETTGGLETVAVRMPAHPVALALINESGVPIAAPSANL 147

Query: 532  STRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLLRPGGVSLEDIKR 711
            +T+PSPT  EHV  D+ GK+ +ILD G    GVESTVI+  VDPP+LLRPG  S+E+++R
Sbjct: 148  ATKPSPTRVEHVIDDIYGKVDVILDSGETFFGVESTVINVTVDPPVLLRPGPFSVEELER 207

Query: 712  VGGKLWENIVVAKKTAG--KLEPVKTPGMKYRHYSPTAKVVLFVNCGDGINAIENYLTNN 885
            + GK    +VV ++  G  + +    PGMKY+HY+PT ++++  N       I      N
Sbjct: 208  LFGK----VVVPEQAKGTAEFDVALAPGMKYKHYAPTKRLLVVENRSVLRGVI------N 257

Query: 886  KVDASTTKIALLKS----KHFGEDHPHFIIKRLGTTGN--EISHNLFKYLREVDEEDKVE 1047
            ++   + +IALL +    K F  +    I   LG+  N  EIS NLF   R++D+ + V+
Sbjct: 258  ELQKRSCRIALLCASEVCKQFRGEKIEII--ELGSENNLYEISRNLFDSFRKLDKSN-VD 314

Query: 1048 LIFVEGIDETNEGLAVMNRLSKAA 1119
            +  +  I E   GLA+MNR  KA+
Sbjct: 315  IGVIHSISEKGIGLAIMNRTRKAS 338


>P39153|YWLC|YWLC_BACSU (SP: Bacillus subtilis) Hypothetical protein
            ywlC.
          Length = 346

 Score =  237 bits (604), Expect = 2e-61
 Identities = 147/351 (41%), Positives = 206/351 (58%), Gaps = 3/351 (0%)
 Frame = +1

Query: 76   FVNDKPQISDNETLINLEIAAKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNR 255
            FV+   ++S N+  I     A  L   +  + FPTETVYGL  +A + ++VK IY+AK R
Sbjct: 7    FVDVTDELSTNDPQI---AQAAALLRENEVVAFPTETVYGLGANAKNTDAVKKIYEAKGR 63

Query: 256  PADNPLIVHISSIEQLKRKLINYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTAN 435
            P+DNPLIVHI+ I QL+   +    P+    L+  FWPG LT++LP   D+ +S  VTA 
Sbjct: 64   PSDNPLIVHIADISQLED--LTGPAPEKAKTLMKRFWPGALTLILPCKPDA-LSPRVTAG 120

Query: 436  QDTFAVRMPNHPVARALIAMSDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGA 615
             +T A+RMP+HP+A ALI  S  PIAAPSAN S +PSPT AEHV HDL+G+I  I+DGG 
Sbjct: 121  LETVAIRMPDHPLALALIRESGLPIAAPSANLSGKPSPTKAEHVAHDLDGRIAGIVDGGP 180

Query: 616  CNVGVESTVIDGLVDPPMLLRPGGVSLEDIKRVGGKLWENIVVAKKTAGKLEPVKTPGMK 795
              +GVESTV+    D P+LLRPGG++ E I+ V G     I V K  + + E   +PGMK
Sbjct: 181  TGIGVESTVLSCADDIPVLLRPGGITKEQIEAVIGP----IHVDKGLSDQNEKPISPGMK 236

Query: 796  YRHYSPTAKVVLFVNCGDGI-NAIENYLTNNKVDASTTKIALLKSKHFGEDHPHFIIKRL 972
            Y HY+PTA + +     + I + I+ Y    +      ++ +L ++     +    +K  
Sbjct: 237  YTHYAPTAPLAICEGSPERIQHLIQEYQQGGR------RVGVLTTEEKAGVYSADYVKSC 290

Query: 973  GTTG--NEISHNLFKYLREVDEEDKVELIFVEGIDETNEGLAVMNRLSKAA 1119
            G       ++  L+  LR  D E+KV+ I  E   +T  GLA+MNRL KAA
Sbjct: 291  GRRAQLETVAAGLYDALRSFD-ENKVDFIIAESFPDTGVGLAIMNRLMKAA 340


>Q898Y2|CTC00305|Q898Y2 (TrEMBL: Clostridium tetani) SUA5 protein.
          Length = 350

 Score =  230 bits (586), Expect = 3e-59
 Identities = 132/319 (41%), Positives = 196/319 (61%), Gaps = 3/319 (0%)
 Frame = +1

Query: 172  FPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKLINYEIPQVYLDL 351
            FPTETVYGL  +AL +++VK I++AK RP DNPLIVHIS +E++   +   E+P++   L
Sbjct: 33   FPTETVYGLGANALKEDAVKKIFEAKGRPQDNPLIVHISELEEIAPLV--EEVPKIAYKL 90

Query: 352  ISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAMSDTPIAAPSANA 531
            +  FWPGP+TI+LP  K S I    +   ++  +RMP++ +AR LI  +  PIAAPSAN 
Sbjct: 91   MEKFWPGPMTIILP--KSSLIPSRTSGGLNSVGIRMPSNEIARKLIKEAKVPIAAPSANI 148

Query: 532  STRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLLRPGGVSLEDIKR 711
            S RPSPT  E    DL GK+  I+ G  C+VGVESTVID  + PP +LRPGG++LE +K 
Sbjct: 149  SGRPSPTNIETCIEDLKGKVDYIIGGEKCDVGVESTVIDCTIYPPCVLRPGGITLEMLKN 208

Query: 712  VGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGINAIENY-LTNNK 888
            +  K++ +  +       L+P K PGMKYRHY+P A+  L +  GD  N+++      ++
Sbjct: 209  IDNKIYIDPAIMAGDNKDLKP-KAPGMKYRHYAPKAE--LKIIRGDLKNSVDKIKKLTDE 265

Query: 889  VDASTTKIALLKSKHFGEDHPHFIIKRLGTTGN--EISHNLFKYLREVDEEDKVELIFVE 1062
             ++    + ++ +    E + +  +  LG   N   I+ NLF  LR  D ++ V++I  E
Sbjct: 266  YESQGKNVGIMATDETREFYVNGQVISLGGRENLETIARNLFSVLRSFDSKN-VDIILSE 324

Query: 1063 GIDETNEGLAVMNRLSKAA 1119
              +E   G+A+MNRL K+A
Sbjct: 325  TFEEKGIGIAIMNRLKKSA 343


>Q970S6|ST1526|Q970S6 (TrEMBL: Sulfolobus tokodaii) Hypothetical
            protein ST1526.
          Length = 352

 Score =  228 bits (582), Expect = 8e-59
 Identities = 144/342 (42%), Positives = 202/342 (59%), Gaps = 4/342 (1%)
 Frame = +1

Query: 106  NETLINLEIAAKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHI 285
            N  +  ++IAA ++      + FPTETVYGL  +A    +   I++AKNRP DNPLIVHI
Sbjct: 11   NPEIDKIKIAA-DVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHI 69

Query: 286  SSIEQLKRKLINYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPN 465
            +   QL    +  +IP   L++    WPGPLT +L  T+  P  K VTA  DT AVRMP 
Sbjct: 70   ADFNQLFE--VAKDIPDKVLEIAQIVWPGPLTFVLKKTERVP--KEVTAGLDTVAVRMPA 125

Query: 466  HPVARALIAMSDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVI 645
            HP+A  LI  S  PIAAPSAN +TRPSPT AE V  DLNG++ +I+DGG    GVEST+I
Sbjct: 126  HPIALQLIRESGVPIAAPSANLATRPSPTKAEDVIVDLNGRVDVIIDGGHTFFGVESTII 185

Query: 646  DGLVDPPMLLRPGGVSLEDIKRVGGKLWENIVVAKKTAGKLEP--VKTPGMKYRHYSPTA 819
            +  V+PP+LLRPG  ++E++K    KL+  IV+ +   GK E      PGMKY+HY+P  
Sbjct: 186  NVTVEPPVLLRPGPFTIEELK----KLFGEIVIPEFAQGKKEAEIALAPGMKYKHYAPNT 241

Query: 820  KVVLFVNCGDGINAIENYLTNNKVDASTTKIALLKSKHFGEDHPHFIIKRLGTTGN--EI 993
            +++L  N     N  ++ ++   + +   K+ALL  K   ++        LG+  N  E+
Sbjct: 242  RLLLVEN----RNIFKDVVS---LLSKKYKVALLIPKELSKEFEGLQQIILGSDENLYEV 294

Query: 994  SHNLFKYLREVDEEDKVELIFVEGIDETNEGLAVMNRLSKAA 1119
            + NLF   RE+D+ + V+L  + G  E   G A+MNR  KA+
Sbjct: 295  ARNLFDSFRELDKLN-VDLGIMIGFPERGIGFAIMNRARKAS 335


>Q8RD96|SUA5|Q8RD96 (TrEMBL: Thermoanaerobacter tengcongensis)
            Putative translation factor (Sua5).
          Length = 355

 Score =  228 bits (582), Expect = 8e-59
 Identities = 135/341 (39%), Positives = 204/341 (59%), Gaps = 2/341 (0%)
 Frame = +1

Query: 103  DNETLINLEIAAKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVH 282
            DN  +  ++ AA E+      + FPTETVYG+  ++  +E+VK I+ AK RP DNPLI+H
Sbjct: 11   DNPEIELIDYAA-EVIKKGGLVAFPTETVYGIGANSFDEEAVKRIFIAKGRPQDNPLILH 69

Query: 283  ISSIEQLKRKLINYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMP 462
            I+ ++Q+    +  E P+    L   FWPGPLT++L   K   +  + TA  +T A+RMP
Sbjct: 70   IALMDQVYE--LAAEFPEKAKKLAHRFWPGPLTVVLK--KSDKVPYVNTAGMNTVAIRMP 125

Query: 463  NHPVARALIAMSDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTV 642
            ++P+A  LI  +  PI+APSAN S +PSPT A HV  DL GK+ +I+DGG C+VG+ESTV
Sbjct: 126  SNPIAHLLIKRAGVPISAPSANVSGKPSPTDASHVIEDLYGKVDVIIDGGKCDVGLESTV 185

Query: 643  IDGLVDPPMLLRPGGVSLEDIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAK 822
            +D   + P++LRPG V+LE +K V G++  +  +  +    ++P K+PGMKY+HYSP A+
Sbjct: 186  VDLTEEVPVILRPGAVTLEMLKEVLGEVKLDPSLLTRPDENIKP-KSPGMKYKHYSPKAE 244

Query: 823  VVLFVNCGDGINAIENYLTNNKVDASTTKIALLKSKHFGEDHPHFIIKRLGTTG--NEIS 996
            V +     D +      L  N++  +  K+ ++ +      +    I  +G       I+
Sbjct: 245  VYIVKGPLDKVVKKIQQLAKNQL-KNGKKVGIMATVQTSTQYKEGEIIVVGDRDKPETIA 303

Query: 997  HNLFKYLREVDEEDKVELIFVEGIDETNEGLAVMNRLSKAA 1119
             NLF+ LRE D    VE++F E  +  + GLA+MNRL KAA
Sbjct: 304  KNLFETLREFDRRG-VEVVFAESFNYDDIGLAIMNRLEKAA 343


>Q8EM64|OB2994|Q8EM64 (TrEMBL: Oceanobacillus iheyensis) Hypothetical
            conserved protein.
          Length = 339

 Score =  224 bits (571), Expect = 2e-57
 Identities = 134/318 (42%), Positives = 193/318 (60%)
 Frame = +1

Query: 166  IGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKLINYEIPQVYL 345
            + FPTETVYGL   A + ++V  I++AK RP DNPLI H+++ EQL+R + +  IP    
Sbjct: 31   VAFPTETVYGLGADATNPQAVSKIFQAKGRPEDNPLIAHVATKEQLQRLVTS--IPGYVD 88

Query: 346  DLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAMSDTPIAAPSA 525
             LI+ F PGPLT +LP   +   +  VTA  DT  VR+PNHPVA  L+   D PIAAPSA
Sbjct: 89   KLIAAFSPGPLTFILP--SNGICASNVTAGLDTIGVRIPNHPVALQLLKEVDIPIAAPSA 146

Query: 526  NASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLLRPGGVSLEDI 705
            N S +PSPT A+HV++DL G+I  ++DGG   VG+ESTVID   + P++LRPGGV+ E++
Sbjct: 147  NISGKPSPTTADHVFNDLEGRIAGLVDGGPTGVGLESTVIDCTQEIPVILRPGGVTKENL 206

Query: 706  KRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGINAIENYLTNN 885
            + V G +   +V      G+ +P K+PGMKY+HY+P   + +F    +G   +       
Sbjct: 207  ESVIGHV---LVDPGIIDGEGKP-KSPGMKYKHYAPEVPLWIFEGDSNGFQEL-----IE 257

Query: 886  KVDASTTKIALLKSKHFGEDHPHFIIKRLGTTGNEISHNLFKYLREVDEEDKVELIFVEG 1065
            K   S  ++ +L S  F     H  I +LG +  EI+ +L+  LR   ++  V++I  E 
Sbjct: 258  KEQQSNHRVGVLCSNQFAVQLSHDNIYQLGDSMEEIASSLYDGLRYF-KQQAVDVIICES 316

Query: 1066 IDETNEGLAVMNRLSKAA 1119
              E+  G A+MNRL KA+
Sbjct: 317  FPESGIGQAIMNRLRKAS 334


>Q97F70|CAC2882|Q97F70 (TrEMBL: Clostridium acetobutylicum) Predicted
            translation factor (SUA5).
          Length = 350

 Score =  221 bits (564), Expect = 1e-56
 Identities = 135/338 (39%), Positives = 196/338 (57%), Gaps = 5/338 (1%)
 Frame = +1

Query: 136  AKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKL 315
            A E       + FPTETVYGL  +A   E+ K I++AK RP DNPLI+HIS  E + + +
Sbjct: 21   AGEFIKNGKLVVFPTETVYGLGANAEDGEATKKIFEAKGRPQDNPLIIHISDFEDVDKVV 80

Query: 316  INYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAM 495
             N  I      L+  FWPGP+T+++   K S IS + +A   +  VRMP+  +AR LI  
Sbjct: 81   RN--ISDSARKLMREFWPGPMTLIME--KKSIISDVTSAGLTSVGVRMPSDKIARKLIKF 136

Query: 496  SDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLL 675
            S   IAAPSAN S +PSPT  E    DLNGK+  I+ G  C  G+ESTVID  V+P  +L
Sbjct: 137  SGVSIAAPSANLSGKPSPTDVERCIEDLNGKVDYIIGGNKCEYGLESTVIDCTVNPVCIL 196

Query: 676  RPGGVSLEDIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGI 855
            RPG ++LE +++V  K + +  +  K    L+P K PGMKY+HY+P A V +    GD  
Sbjct: 197  RPGAITLEMVRKVDEKAYIDPAIMAKPEPSLKP-KAPGMKYKHYAPKAPVKII--DGDLK 253

Query: 856  NAIE--NYLTNNKVDASTTKIALLKSKHFGEDHPHFIIKRLGTTGN--EISHNLFKYLRE 1023
              IE  N +  N +D    K+ ++ +     ++ + I+  LG+  +   I  NLF+ LR+
Sbjct: 254  KTIEKINEMVQNYID-DNKKVGIMATDETKNNYRNAIVISLGSRKDIYSIGRNLFETLRD 312

Query: 1024 VDEEDKVELIFVEGIDETNEGLAVMNRLSKAA-MEVVN 1134
             D +  V++I  E  DE   G+A+MNRL+K+A  +++N
Sbjct: 313  FD-DCGVDVILSEAFDEEGFGVAIMNRLNKSAGFDIIN 349


>Q88UT4|LP_2376|Q88UT4 (TrEMBL: Lactobacillus plantarum) SUA5 family
            translation factor (Putative).
          Length = 339

 Score =  219 bits (557), Expect = 6e-56
 Identities = 136/344 (39%), Positives = 184/344 (53%), Gaps = 15/344 (4%)
 Frame = +1

Query: 133  AAKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRK 312
            AA  L T    + FPTETVYGL   A + ++VK +Y AK RP+DNPLIVH++ +E ++R 
Sbjct: 13   AAAALLTAGQLVAFPTETVYGLGADATNVDAVKQVYLAKGRPSDNPLIVHVADVETVER- 71

Query: 313  LINYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIA 492
                 + +    LI  FWPGPLT++  +  D+ ++  VT    T A R P++    ALI 
Sbjct: 72   -FAQPLSEAAKKLIKAFWPGPLTMIFKLKPDA-LAPEVTGGLQTAAFRNPDNEATLALIR 129

Query: 493  MSDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPML 672
             + TPI  PSAN S +PSPT A+HV HDL GKI  ILD G   VGVESTV+D   D P +
Sbjct: 130  AAGTPIVGPSANTSGKPSPTTAQHVLHDLRGKIAGILDDGPTKVGVESTVLDLSTDKPAI 189

Query: 673  LRPGGVSLEDIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGD- 849
            LRPG V+ E I+RV G     +       G  E  K PGMKY+HY+P A+V +     D 
Sbjct: 190  LRPGAVTPEAIERVIGM---PVQTELHHVGAKEVPKAPGMKYKHYAPNAQVYIVDRSEDW 246

Query: 850  --------------GINAIENYLTNNKVDASTTKIALLKSKHFGEDHPHFIIKRLGTTGN 987
                          G+ A ++ LTNN++ A+  + +L      GED              
Sbjct: 247  PEALAWAAQQDVPMGVMATDDILTNNQIPANCEQFSL------GEDI------------Q 288

Query: 988  EISHNLFKYLREVDEEDKVELIFVEGIDETNEGLAVMNRLSKAA 1119
              S  LF  LR  D E +++ I  +  +    GLA MNRL+K+A
Sbjct: 289  SASRELFAGLRHFDTETEIKDILCQAFENKGLGLAYMNRLNKSA 332


>Q831F8|EF2552|Q831F8 (TrEMBL: Enterococcus faecalis (Streptococcus
            faecalis)) Sua5/YciO/YrdC/YwlC family protein.
          Length = 340

 Score =  218 bits (556), Expect = 8e-56
 Identities = 128/323 (39%), Positives = 182/323 (56%), Gaps = 5/323 (1%)
 Frame = +1

Query: 166  IGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKLINYEIPQVYL 345
            + FPTETVYGL   AL++ +VK +Y+ K RP+DNPLIVH++++E +K+ +    +P+V  
Sbjct: 24   VAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPEVAT 81

Query: 346  DLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAMSDTPIAAPSA 525
             L+S FWPGPLT++  +  D+  SK VT   +T A RMP++    ALI  ++ P+  PSA
Sbjct: 82   KLVSAFWPGPLTLIFNVPSDT-FSKTVTGGLETVAFRMPDNQATLALIEQANVPLVGPSA 140

Query: 526  NASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDP--PMLLRPGGVSLE 699
            N S +PSPT AEHVYHDL GKI  ILD G   +GVESTV+D   +   P++LRPG ++ E
Sbjct: 141  NTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIGVESTVLDLTAEDGVPVILRPGAITKE 200

Query: 700  DIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGINAIENYLT 879
             ++ +  ++  +  +  +TA      K PGMKY+HYSP A+V +           E    
Sbjct: 201  QLESIIPQVKIDTHLISETAAP----KAPGMKYKHYSPDAEVWIISG-----QTAEWQAA 251

Query: 880  NNKVDASTTKIALLKSKHFG---EDHPHFIIKRLGTTGNEISHNLFKYLREVDEEDKVEL 1050
              +      KI L  S       +    F+      T    +  LF  LR +DE+     
Sbjct: 252  IQQAKEQQEKIGLFLSDEQAAQLDTENAFVYSYGAETVENATKELFAGLRALDEQG-ATT 310

Query: 1051 IFVEGIDETNEGLAVMNRLSKAA 1119
            IF +G  ET  G A MNRL K+A
Sbjct: 311  IFAQGFAETGLGTAYMNRLKKSA 333


>Q9WZV6|TM0852|Q9WZV6 (TrEMBL: Thermotoga maritima) Hypothetical
            protein TM0852.
          Length = 335

 Score =  218 bits (554), Expect = 1e-55
 Identities = 150/367 (40%), Positives = 200/367 (54%), Gaps = 3/367 (0%)
 Frame = +1

Query: 40   TRILKVRPESIQFVNDKPQISDNETLINLEIAAKELTTTHNAIGFPTETVYGLAGSALSD 219
            TR+LKV P           +  +E ++     A EL      I FPTETVYG+   A ++
Sbjct: 2    TRVLKVDP-----------LFPDEKVLK---EAAELLRNGEVIIFPTETVYGIGADAYNE 47

Query: 220  ESVKSIYKAKNRPADNPLIVHISSIEQLKRKLINYEIPQVYLDLISHFWPGPLTILLPIT 399
            E+ K I+K K RPADNPLIVHI S +QL+     YE    +LD +  FWPGPLT++    
Sbjct: 48   EACKKIFKLKERPADNPLIVHIHSFKQLEEIAEGYE---PHLDFLKKFWPGPLTVIFR-K 103

Query: 400  KDSPISKLVTANQDTFAVRMPNHPVARALIAMSDTPIAAPSANASTRPSPTLAEHVYHDL 579
            K   I  +VTA+  T AVRMP HPVA  LI +   PIAAPSAN S RPS T  +HV  D 
Sbjct: 104  KSEKIPPVVTADLPTVAVRMPAHPVALKLIELFGHPIAAPSANISGRPSATNVKHVIEDF 163

Query: 580  NGKIPLILDGGACNVGVESTVIDGLVDPPMLLRPGGVSLEDIKRVGGKLWENIVV---AK 750
             GK+ LI+D G    G+EST++D   + P+LLRPG V +E +K    +L+  +VV    +
Sbjct: 164  MGKVKLIIDAGDTPFGLESTIVDLTKEKPVLLRPGPVEVERLK----ELFPELVVPDFVR 219

Query: 751  KTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGINAIENYLTNNKVDASTTKIALLKSK 930
            K   K  P+  PGMKYRHY+P   ++L     + +  +E  L   K       I + + K
Sbjct: 220  KGNFKGRPL-APGMKYRHYAPLKPLILV----EDLTKMEEVL---KKYPDHVVICVEERK 271

Query: 931  HFGEDHPHFIIKRLGTTGNEISHNLFKYLREVDEEDKVELIFVEGIDETNEGLAVMNRLS 1110
               +D    I+         I+ N+F  LRE ++  K E I VEG +E     AVMNRL 
Sbjct: 272  ELYDDR---IVVGSLKNPYSIAQNIFSALREAEKMGK-EYIIVEGFEERGILFAVMNRLR 327

Query: 1111 KAAMEVV 1131
            KAA E+V
Sbjct: 328  KAATEIV 334


>Q8XIC1|CPE2200|Q8XIC1 (TrEMBL: Clostridium perfringens) Hypothetical
            protein CPE2200.
          Length = 350

 Score =  213 bits (541), Expect = 5e-54
 Identities = 136/354 (38%), Positives = 200/354 (56%), Gaps = 5/354 (1%)
 Frame = +1

Query: 70   IQFVNDKPQISDNETLINLEIAAKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAK 249
            +QF+ D      ++ +  LE AA E+        FPTETVYGL  +AL  E+VK I+ AK
Sbjct: 5    VQFIKDI-----DKDIKYLEEAA-EIIKNGGIGAFPTETVYGLGANALDGEAVKKIFVAK 58

Query: 250  NRPADNPLIVHISSIEQLKRKLINYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVT 429
             RP DNPLI+HI+  + + + +   EIP+   +L+  FWPGPLTI+L   K   +S + +
Sbjct: 59   GRPQDNPLIIHIADKKDIDKYVA--EIPKYAQELMDKFWPGPLTIILK--KKDIVSDVTS 114

Query: 430  ANQDTFAVRMPNHPVARALIAMSDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDG 609
            A  DT  VRMPN  +A  LI +S  PIAAPSAN S RPSPT  E    DLNG++  I+  
Sbjct: 115  AGLDTVGVRMPNDEIALKLIELSGVPIAAPSANISGRPSPTDIERCEEDLNGRVDFIIGA 174

Query: 610  GACNVGVESTVIDGLVDPPMLLRPGGVSLEDIKRVGGKLWENIVVAK---KTAGKLEPVK 780
                +GVEST++D   +   +LRPGG++LE +K +     E + + K    T  K    K
Sbjct: 175  KKSEIGVESTIVDATGEHLCVLRPGGITLEMLKDID----EGVDIDKAILTTLDKDTKPK 230

Query: 781  TPGMKYRHYSPTAKVVLFVNCGDGINAIENYLTNNKVDASTTKIALLKSKHFGEDHPHFI 960
             PGMKY+HY+P AKV +     + +      + +N +D    K+ ++ +      +   I
Sbjct: 231  APGMKYKHYAPKAKVRMVQGPINKMVEKIKEIVHNYID-EDLKVGIMATDETISMYDEGI 289

Query: 961  IKRLGTTGN--EISHNLFKYLREVDEEDKVELIFVEGIDETNEGLAVMNRLSKA 1116
            +K LGT  +   ++ NLF+ LR  D+   V++I  E  +E + G+A+MNRL K+
Sbjct: 290  VKSLGTREDLTSVTKNLFEMLRAFDDLG-VDVIITEAFEEKDLGVAIMNRLKKS 342


>Q9Y988|APE2397|Q9Y988 (TrEMBL: Aeropyrum pernix) 367AA long
            hypothetical SUA5 protein.
          Length = 367

 Score =  211 bits (537), Expect = 1e-53
 Identities = 134/341 (39%), Positives = 181/341 (53%), Gaps = 13/341 (3%)
 Frame = +1

Query: 136  AKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKL 315
            A E+      + FPTETVYGL   AL+  +   I++ K RP DNPLIVH+SS+E  +   
Sbjct: 29   AAEVLRRGGLVAFPTETVYGLGADALNPRAAARIFEVKGRPPDNPLIVHVSSLEMARTVA 88

Query: 316  INYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAM 495
               EIP   L L+   WPGPLT++LP  +   +  +VTA  +T AVRMP H VA  L+  
Sbjct: 89   ---EIPGKALRLVEKLWPGPLTLVLP--RKPVVPDIVTAGLETVAVRMPAHKVALELVKA 143

Query: 496  SDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLL 675
            +  P+AAPSAN S RPSPT  EHV  DL+  + +ILD G    GVEST+ID    PP+LL
Sbjct: 144  AGRPVAAPSANPSGRPSPTSGEHVIRDLDCMVDVILDAGETYFGVESTIIDLTRTPPVLL 203

Query: 676  RPGGVSLEDIKRVGGKLWENIVVAKKTAG--KLEPVKTPGMKYRHYSPTAKVVLFVNCGD 849
            RPG + +E ++R+   L E I+V  +  G    +    PGMKYRHY+P   ++L      
Sbjct: 204  RPGPIPVEVLERL---LEEKILVPPEARGLRAADRPLAPGMKYRHYAPDTPLILVDTSPG 260

Query: 850  GINAIENYLTNNKVDASTTKIALLKSKHFGEDHPHFI---------IKRLGTTGNE--IS 996
             +  I          A   ++AL+      +     +         I RLG   +    +
Sbjct: 261  AVERIVEAAVREVARARGLRVALVGPDELVDVVALLLRLRGVEPAAIFRLGPLADTTVAA 320

Query: 997  HNLFKYLREVDEEDKVELIFVEGIDETNEGLAVMNRLSKAA 1119
              LFK LR +DE   +++  V    E   GLAVMNRL KAA
Sbjct: 321  RRLFKTLRRIDELGNIDVAIVLPFPERGIGLAVMNRLRKAA 361


>Q978U4|TV1321|Q978U4 (TrEMBL: Thermoplasma volcanium) Hypothetical
            protein TV1321.
          Length = 361

 Score =  211 bits (536), Expect = 2e-53
 Identities = 130/326 (39%), Positives = 191/326 (58%), Gaps = 2/326 (0%)
 Frame = +1

Query: 172  FPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKLINYEIPQVYLDL 351
            FPTETVYGL  +A++DE+ K I+ AK RP+DNPLIVHIS ++QL+    +  + + Y  +
Sbjct: 32   FPTETVYGLGANAMNDEACKKIFIAKGRPSDNPLIVHISDMDQLEN--FSKNVKEEYKAI 89

Query: 352  ISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAMSDTPIAAPSANA 531
            +   WPGPLT++  + K + I   VTA   T A+RMP+  +AR LI M+  PIAAPSAN 
Sbjct: 90   LKELWPGPLTVV--VEKANGIPDTVTAKLPTVAIRMPDDSIARNLIDMAG-PIAAPSANI 146

Query: 532  STRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLLRPGGVSLEDIKR 711
            ST+PS T ++     L+G++ +I+D G    G+EST+ID   DP  LLRPG  S+ED++ 
Sbjct: 147  STKPSITDSKDAIRFLDGRVDVIIDAGKVKFGIESTIIDLTQDPVRLLRPGAFSVEDLEP 206

Query: 712  VGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDG--INAIENYLTNN 885
            + GK+  + V   K   K+    TPGMKYRHYSP  K+ L   C D   + +++  L NN
Sbjct: 207  LFGKITVDKVALGKAEAKV--AITPGMKYRHYSPNKKIFL---CKDREVVESLKEELPNN 261

Query: 886  KVDASTTKIALLKSKHFGEDHPHFIIKRLGTTGNEISHNLFKYLREVDEEDKVELIFVEG 1065
             V   T +++       G      I+ R  +    ++HNLF    E+D+      + +  
Sbjct: 262  GVLMCTEEVSQ------GISTNKIIVGR-DSDLYSVAHNLFSSFIELDDSSYNYGVIIP- 313

Query: 1066 IDETNEGLAVMNRLSKAAMEVVNGGE 1143
             +E   GLA+MNR+ KA+  V++  E
Sbjct: 314  FEEKGIGLAIMNRIRKASTAVISSSE 339


>Q8CRN1|SE1713|Q8CRN1 (TrEMBL: Staphylococcus epidermidis) Conserved
            hypothetical protein.
          Length = 347

 Score =  205 bits (521), Expect = 9e-52
 Identities = 128/330 (38%), Positives = 191/330 (57%), Gaps = 4/330 (1%)
 Frame = +1

Query: 166  IGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKLINYEIPQVYL 345
            +  PTETVYGL  +A ++E+V++IY AK RP+DNPLIVHI SIEQL    + Y   +V +
Sbjct: 34   VAIPTETVYGLGANARNEEAVENIYVAKGRPSDNPLIVHIHSIEQLD-DFVEYIDDKVKV 92

Query: 346  DLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAMSDTPIAAPSA 525
             L+  FWPGP++ +LP+ +    SK VT   ++ AVRMP+H + RAL+ + D PIAAPSA
Sbjct: 93   -LMDEFWPGPISFILPLKQGYLCSK-VTGGLESIAVRMPSHKIGRALLQIVDEPIAAPSA 150

Query: 526  NASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLLRPGGVSLEDI 705
            N S RPSPT  EHV  DLNGK+  I++G  C  G+ESTVID    P  + RPG ++ + I
Sbjct: 151  NISGRPSPTTFEHVNRDLNGKVNGIVNGDQCEEGLESTVIDCTQFPFRIARPGSITQDMI 210

Query: 706  KRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGINAIENYLTNN 885
            +    KL  +I   ++   + E    PGMKY+HYSP   + +       +  +   + N 
Sbjct: 211  ET---KLPHSI--NRQIYEENEKPIAPGMKYKHYSPETPLTI-------VKDLNKKIAN- 257

Query: 886  KVDASTTKIALL--KSKHFGEDHPHFIIKRLGTTGN--EISHNLFKYLREVDEEDKVELI 1053
              D   +K+A +  +S+          I      G+     HNL++ L E+D+ +++E  
Sbjct: 258  --DDKWSKVAFVFPESQRSLIPENSIFISLCENKGDFKSAGHNLYEILHELDQNEEIEEA 315

Query: 1054 FVEGIDETNEGLAVMNRLSKAAMEVVNGGE 1143
            ++ G ++ +   A+MNR+ KAA   +  GE
Sbjct: 316  YIYGFEDNHHTEAIMNRMLKAASYKLIKGE 345


>Q8ZU26|PAE2978|Q8ZU26 (TrEMBL: Pyrobaculum aerophilum) Sua5 family
            protein.
          Length = 343

 Score =  202 bits (514), Expect = 6e-51
 Identities = 121/329 (36%), Positives = 183/329 (55%), Gaps = 1/329 (0%)
 Frame = +1

Query: 136  AKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKL 315
            A E+      +  PTETVYGL   A  ++    ++KAK RP DNPLIVH+ S+E      
Sbjct: 19   AAEVLKNGGIVAAPTETVYGLFTHAYREDGCVKVFKAKGRPMDNPLIVHVDSVEMASEIA 78

Query: 316  INYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAM 495
               EIP+    +++  WPGP+TI+  +     + + VTA  +T AVR P HP+  A+I  
Sbjct: 79   ---EIPEGIRGVLAQLWPGPVTIV--VKSRGVVPRCVTAGLNTVAVRAPAHPIPLAIIKE 133

Query: 496  SDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLL 675
             + PIA PSAN + RPSPT A H+  DL  ++ LI+DGG    GVEST+ID    PP LL
Sbjct: 134  LNAPIAGPSANKAGRPSPTTATHILEDLGDEVDLIIDGGPTFFGVESTIIDVTRKPPALL 193

Query: 676  RPGGVSLEDIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSP-TAKVVLFVNCGDG 852
            RPG  ++E++++  G++   I    +   + E    PGMKY+HY+P T  V++  +  + 
Sbjct: 194  RPGPFTVEELEKFFGEI--QIPPVARGLAEAEVALAPGMKYKHYAPDTMLVIVHFDLAEA 251

Query: 853  INAIENYLTNNKVDASTTKIALLKSKHFGEDHPHFIIKRLGTTGNEISHNLFKYLREVDE 1032
            +  ++         A   K+A+L +     D    +   LGT   E++ NL+K LR++D+
Sbjct: 252  VKVLK---------ARGLKVAVLCAAGKCADADASL--HLGTDLYEVAKNLYKSLRDLDK 300

Query: 1033 EDKVELIFVEGIDETNEGLAVMNRLSKAA 1119
               V +  +  ++E   GLA+MNR+ KAA
Sbjct: 301  L-SVNIGIIPAVEERGIGLAIMNRIRKAA 328


>Q8STM6|ECU09_1610|Q8STM6 (TrEMBL: Encephalitozoon cuniculi)
            Hypothetical protein ECU09_1610.
          Length = 337

 Score =  201 bits (511), Expect = 1e-50
 Identities = 127/330 (38%), Positives = 181/330 (54%), Gaps = 6/330 (1%)
 Frame = +1

Query: 160  NAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKLINYEIPQV 339
            + +  PTETVYGLA S  +  +V+ + K K RPADNPL V +SS   LK +++   IP+ 
Sbjct: 20   DVVAVPTETVYGLAASIYNPRAVERLLKLKRRPADNPLPVAVSSYRMLK-EIVKEPIPEE 78

Query: 340  YLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAMSDTPIAAP 519
            Y  L+  FWPGPLT+L   +KD  +S ++ +  ++ AVRMP       +I     P+  P
Sbjct: 79   YRRLMDMFWPGPLTLLFR-SKDC-VSSVIRSGLESVAVRMPKSKHLLEIIERLGAPVVLP 136

Query: 520  SANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLLRPGGVSLE 699
            SAN S RPSPT A HV  D   ++ LI+DGG C +G+ESTV+        +LRPGG+++E
Sbjct: 137  SANISGRPSPTTAGHVVEDFGDEVKLIIDGGPCPIGLESTVVSYADGGLQILRPGGITVE 196

Query: 700  DIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGI-NAIENYL 876
            DI+ V        V  +  A   E   +PG KY+HYSP + ++LF    + + + I  Y+
Sbjct: 197  DIESVANCK----VFVRNRANDEETELSPGQKYKHYSPRSPLILFKGQPEEVKSGILEYI 252

Query: 877  TNNKVDASTTKIALLKSKHFGED-----HPHFIIKRLGTTGNEISHNLFKYLREVDEEDK 1041
              N  D S   +AL    H G D          +  +G+   E+  NLF+ LR +D+   
Sbjct: 253  RANP-DVSRIGVAL----HSGIDLGVPVDGRISVFNMGSDRREVCRNLFEGLRSLDKISS 307

Query: 1042 VELIFVEGIDETNEGLAVMNRLSKAAMEVV 1131
            V  I   G+D   EG A+MNRL KAA  +V
Sbjct: 308  V--ILAAGVDYGEEGDAIMNRLEKAADSIV 335


>Q8NVG7|MW2040|Q8NVG7 (TrEMBL: Staphylococcus aureus (strain MW2))
            Hypothetical protein MW2040.
          Length = 348

 Score =  198 bits (504), Expect = 9e-50
 Identities = 126/340 (37%), Positives = 184/340 (54%), Gaps = 5/340 (1%)
 Frame = +1

Query: 139  KELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKLI 318
            K++      IG PTETVYGLA +A  +E+V  IY+AK RP+DNPLIVHI S  QLK    
Sbjct: 25   KDIVLNGGLIGLPTETVYGLAANATDEEAVAKIYEAKGRPSDNPLIVHIHSKGQLKD--F 82

Query: 319  NYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAMS 498
             Y +      L+  FWPGP++ +LP+ K   + + V+    + AVRMP+H V R L+ + 
Sbjct: 83   TYTLDPRVEKLMQAFWPGPISFILPL-KPGYLCRKVSGGLSSVAVRMPSHSVGRQLLQII 141

Query: 499  DTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLLR 678
            + P+AAPSAN S RPSPT   HVY DLNG+I  I+       G+ESTV+D    P  + R
Sbjct: 142  NEPLAAPSANLSGRPSPTTFNHVYQDLNGRIDGIVQAEQSEEGLESTVLDCTSFPYKIAR 201

Query: 679  PGGVSLEDIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGIN 858
            PG ++   I     ++  N +         +P+  PGMKY+HYSP   + +       I 
Sbjct: 202  PGSITAAMIT----EILPNSIAHADYNDTEQPI-APGMKYKHYSPNTPLTI-------IT 249

Query: 859  AIENYLTNNKVDASTTKIALLKSK-HFGEDHPHFIIKRLGTTGNEI---SHNLFKYLREV 1026
             IE+ + N+  D S+    +  +K  F      FI  +L    N++   SHNL+  L  +
Sbjct: 250  DIESKIGNDGKDWSSIAFIVPSNKVAFIPSEAQFI--QLCQDDNDVKQASHNLYDVLHSL 307

Query: 1027 DEEDKVELIFVEGIDETNEGLAVMNRLSKAAM-EVVNGGE 1143
            DE + +   ++ G +  +   A+MNR+ KAA   ++ G E
Sbjct: 308  DENENISAAYIYGFELNDNTEAIMNRMLKAASNHIIKGCE 347


>Q9HLC7|TA0302|Q9HLC7 (TrEMBL: Thermoplasma acidophilum) Sua5 related
            protein.
          Length = 352

 Score =  197 bits (502), Expect = 2e-49
 Identities = 127/340 (37%), Positives = 185/340 (54%), Gaps = 2/340 (0%)
 Frame = +1

Query: 130  IAAKELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKR 309
            + A +   +   + FPTETVYGL   A + E+ K I+ AK RP+DNPLIVHISS+EQ   
Sbjct: 18   VDAVDALRSGGTVVFPTETVYGLGALASNPEACKKIFIAKGRPSDNPLIVHISSMEQF-- 75

Query: 310  KLINYEIPQ--VYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARA 483
               +Y  P     ++ ++  WPGPLT++  + K   IS +VTA   T A+RMP+ P+A  
Sbjct: 76   --FSYSDPDDSYPIEGLNKAWPGPLTVV--VRKAQGISDVVTAGLPTVAIRMPDDPIAHD 131

Query: 484  LIAMSDTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDP 663
            LI M+  PIAAPSAN STRPS T +      L+G++ +I+D G    G+EST+ID    P
Sbjct: 132  LIEMAG-PIAAPSANISTRPSITDSRDAIRFLDGRVDVIIDAGPTRFGIESTIIDITKRP 190

Query: 664  PMLLRPGGVSLEDIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNC 843
              LLRPG  ++ED++ V G +    V   +  G+ +   TPGMKYRHYSP+ K++L    
Sbjct: 191  AELLRPGSYAIEDLEPVFGPIVYGDVA--RGLGEAKIAITPGMKYRHYSPSTKLIL---- 244

Query: 844  GDGINAIENYLTNNKVDASTTKIALLKSKHFGEDHPHFIIKRLGTTGNEISHNLFKYLRE 1023
                 A    +    +D     + +L ++   + H   II         ++HNLF     
Sbjct: 245  -----AETREVFRQILDTVDEDMVVLATEEMVDGHKKAIIIGTDRDLYSVAHNLFSSFIA 299

Query: 1024 VDEEDKVELIFVEGIDETNEGLAVMNRLSKAAMEVVNGGE 1143
            +D+   V+L  +   +E   G A+MNR+ KA+   V   E
Sbjct: 300  LDDM-HVDLALIHPFEERGIGFALMNRIRKASYRTVKSRE 338


>Q99SE2|SAV2116|Q99SE2 (TrEMBL: Staphylococcus aureus (strain N315))
            Hypothetical protein SAV2116.
          Length = 348

 Score =  196 bits (497), Expect = 6e-49
 Identities = 123/331 (37%), Positives = 179/331 (54%), Gaps = 4/331 (1%)
 Frame = +1

Query: 139  KELTTTHNAIGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKLI 318
            K++      IG PTETVYGLA +A  +E+V  IY+AK RP+DNPLIVHI S  QLK    
Sbjct: 25   KDIVLNGGLIGLPTETVYGLAANATDEEAVAKIYEAKGRPSDNPLIVHIHSKVQLKD--F 82

Query: 319  NYEIPQVYLDLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAMS 498
             Y +      L+  FWPGP++ +LP+ K   + + V+    + AVRMP+H V R L+ + 
Sbjct: 83   TYTLDPRVEKLMQAFWPGPISFILPL-KPGYLCRKVSGGLSSVAVRMPSHSVGRQLLQII 141

Query: 499  DTPIAAPSANASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLLR 678
            + P+AAPSAN S RPSPT   HVY DLN +I  I+       G+ESTV+D    P  + R
Sbjct: 142  NEPLAAPSANLSGRPSPTTFNHVYQDLNARIDGIVQAEQSEEGLESTVLDCTSFPYKIAR 201

Query: 679  PGGVSLEDIKRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGIN 858
            PG ++   I     ++  N +         +P+  PGMKY+HYSP   + +       I 
Sbjct: 202  PGSITAAMIT----EILPNSIAHADYNDTEQPI-APGMKYKHYSPNTPLTI-------IT 249

Query: 859  AIENYLTNNKVDASTTKIALLKSK-HFGEDHPHFIIKRLGTTGNEI---SHNLFKYLREV 1026
             IE+ + N+  D S+    +  +K  F      FI  +L    N++   SHNL+  L  +
Sbjct: 250  DIESKIGNDGKDWSSIAFIVPSNKVAFIPSEAQFI--QLCQDDNDVKQASHNLYDVLHSL 307

Query: 1027 DEEDKVELIFVEGIDETNEGLAVMNRLSKAA 1119
            DE + +   ++ G +  +   A+MNR+ KAA
Sbjct: 308  DENENISAAYIYGFELNDNTEAIMNRMLKAA 338


>Q8KBR8|CT1715|Q8KBR8 (TrEMBL: Chlorobium tepidum) SUA5/YciO/YrdC
            family protein.
          Length = 323

 Score =  194 bits (492), Expect = 2e-48
 Identities = 126/327 (38%), Positives = 179/327 (54%), Gaps = 1/327 (0%)
 Frame = +1

Query: 166  IGFPTETVYGLAGSALSDESVKSIYKAKNRPADNPLIVHISSIEQLKRKLINYEIPQVYL 345
            + FPTETVYGL   A + ++V  I+KAK RP+DNPLIVH+++ EQ+    +  EI +   
Sbjct: 22   VAFPTETVYGLGADAFNPDAVAKIFKAKGRPSDNPLIVHVATPEQIGE--VAAEIGETAK 79

Query: 346  DLISHFWPGPLTILLPITKDSPISKLVTANQDTFAVRMPNHPVARALIAMSDTPIAAPSA 525
             L+  F+PGPLT++L   K + + ++V+A   T  VR P+HP+A   +     P+AAPSA
Sbjct: 80   ILVERFFPGPLTLVLK--KRAAVPEIVSAGLPTIGVRCPSHPIASEFLRHCKHPVAAPSA 137

Query: 526  NASTRPSPTLAEHVYHDLNGKIPLILDGGACNVGVESTVIDGLVDPPMLLRPGGVSLEDI 705
            N S RPSPT  + VYHDL GKI  +L G    +G+EST++D  V+PP LLR G VS+E +
Sbjct: 138  NVSGRPSPTDWKTVYHDLGGKIACLLRGEPSTIGLESTIVDCSVNPPRLLRTGAVSIELL 197

Query: 706  KRVGGKLWENIVVAKKTAGKLEPVKTPGMKYRHYSPTAKVVLFVNCGDGINAIENYLTNN 885
            + +   +   I  A K     E  K+PG KYRHYSP A+++L          +E+  +N 
Sbjct: 198  RELVPDI--EIATACKPG---EAPKSPGQKYRHYSPEAEIIL----------VESPPSNL 242

Query: 886  KVDASTTKIALLKSKHFGEDHPHFIIKRLGTTG-NEISHNLFKYLREVDEEDKVELIFVE 1062
            + D     I L          P    K L     +E +  LF + R  D E  +  I+ E
Sbjct: 243  QTDLHAAWIGLAAP-------PAGAAKSLQCRDMDEYARVLFGFFRTCDAEG-IRTIYCE 294

Query: 1063 GIDETNEGLAVMNRLSKAAMEVVNGGE 1143
               E   G A+ +RL KAA E V   +
Sbjct: 295  LPPEKGIGRAIRDRLVKAAGEEVKNSD 321


  Database: sptrembl
    Posted date:  Oct 14, 2003  6:47 PM
  Number of letters in database: 339,323,595
  Number of sequences in database:  1,070,300
  
Lambda     K      H
   0.316    0.135    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 357,014,904
Number of Sequences: 1070300
Number of extensions: 7842946
Number of successful extensions: 24071
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23721
length of database: 339,323,595
effective HSP length: 123
effective length of database: 207,676,695
effective search space used: 53580587310
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)