BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Candida_albicans_chr7-r3-188814-188026-9
         (786 letters)

Database: sptrembl 
           1,070,300 sequences; 339,323,595 total letters

Searching.................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

P11746|MCM1|MCM1_YEAST (SP: Saccharomyces cerevisiae (Baker's ye...   124   1e-27
O42725|UMC1|O42725 (TrEMBL: Ustilago maydis (Smut fungus)) MADS-...   117   1e-25
O76853|SRFA|O76853 (TrEMBL: Dictyostelium discoideum (Slime mold...   114   2e-24
P07249|ARGR1|ARG1_YEAST (SP: Saccharomyces cerevisiae (Baker's y...    98   1e-19
Q9U613|SRF|Q9U613 (TrEMBL: Artemia sanfranciscana (Brine shrimp)...    97   2e-19
Q9XYR1|SRF|Q9XYR1 (TrEMBL: Junonia coenia (Peacock butterfly) (P...    97   3e-19
Q9JM73|SRF|Q9JM73 (TrEMBL: Mus musculus (Mouse)) Serum response ...    95   1e-18
Q24535|BS|SRF_DROME (SP: Drosophila melanogaster (Fruit fly)) Se...    95   1e-18
Q9W182|BS|Q9W182 (TrEMBL: Drosophila melanogaster (Fruit fly)) B...    95   1e-18
Q9YH93|SRF|Q9YH93 (TrEMBL: Brachydanio rerio (Zebrafish) (Danio ...    94   1e-18
P23790||SRF_XENLA (SP: Xenopus laevis (African clawed frog)) Ser...    94   1e-18
P11831|SRF|SRF_HUMAN (SP: Homo sapiens (Human)) Serum response f...    94   1e-18
Q7ZUA3||Q7ZUA3 (TrEMBL: Brachydanio rerio (Zebrafish) (Danio rer...    94   1e-18
O62543||O62543 (TrEMBL: Geodia cydonium (Sponge)) Serum response...    94   2e-18
Q18955|D1081.2|Q18955 (TrEMBL: Caenorhabditis elegans) D1081.2 p...    93   3e-18
Q90718|SRF|SRF_CHICK (SP: Gallus gallus (Chicken)) Serum respons...    92   5e-18
Q964I0|SRF|Q964I0 (TrEMBL: Hydra attenuata (Hydra) (Hydra vulgar...    92   5e-18
Q8SUU7|ECU07_1740|Q8SUU7 (TrEMBL: Encephalitozoon cuniculi) MADS...    73   4e-12
P78926|MAP1|MAP1_SCHPO (SP: Schizosaccharomyces pombe (Fission y...    64   1e-09
Q9U325|W10D5.1|Q9U325 (TrEMBL: Caenorhabditis elegans) W10D5.1 p...    56   5e-07
Q27339|MEF-2|Q27339 (TrEMBL: Caenorhabditis elegans) CEMEF-2.          56   5e-07
Q964H9|SRF|Q964H9 (TrEMBL: Hydractinia echinata (Snail fur)) Ser...    55   9e-07
Q40767|DAL3|Q40767 (TrEMBL: Picea abies (Norway spruce) (Picea e...    51   1e-05
Q9SEE0|DAL12|Q9SEE0 (TrEMBL: Picea abies (Norway spruce) (Picea ...    50   3e-05
Q9SEE1|DAL12|Q9SEE1 (TrEMBL: Picea abies (Norway spruce) (Picea ...    50   3e-05
O82095|CMADS4|O82095 (TrEMBL: Ceratopteris richardii (Triangle w...    49   6e-05
Q9ST07|GPMADS1|Q9ST07 (TrEMBL: Gnetum parvifolium) GpMADS1 protein.    48   1e-04
Q41828|ZAG4|Q41828 (TrEMBL: Zea mays (Maize)) MADS box protein (...    48   1e-04
Q9LSR6||Q9LSR6 (TrEMBL: Arabidopsis thaliana (Mouse-ear cress)) ...    48   1e-04
Q9LN16|T13M22.2|Q9LN16 (TrEMBL: Arabidopsis thaliana (Mouse-ear ...    47   2e-04

>P11746|MCM1|MCM1_YEAST (SP: Saccharomyces cerevisiae (Baker's
           yeast)) Pheromone receptor transcription factor
           (GRM/PRTF protein).
          Length = 286

 Score =  124 bits (311), Expect = 1e-27
 Identities = 61/110 (55%), Positives = 80/110 (72%)
 Frame = +1

Query: 151 TSQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGL 330
           T+ G+ QKERRKIEIKFI+ K+RRH+TFSKRK GIMKKA+E               ETGL
Sbjct: 10  TNNGQ-QKERRKIEIKFIENKTRRHVTFSKRKHGIMKKAFELSVLTGTQVLLLVVSETGL 68

Query: 331 VYTFTTPKLQPLVTKSEGKNLIQACLNAPEEGLGDDQENQSDGNTGDSPD 480
           VYTF+TPK +P+VT+ EG+NLIQACLNAP++   ++++ + DG+  D  D
Sbjct: 69  VYTFSTPKFEPIVTQQEGRNLIQACLNAPDD---EEEDEEEDGDDDDDDD 115


>O42725|UMC1|O42725 (TrEMBL: Ustilago maydis (Smut fungus)) MADS-box
           homolog Umc1.
          Length = 454

 Score =  117 bits (294), Expect = 1e-25
 Identities = 59/103 (57%), Positives = 74/103 (71%)
 Frame = +1

Query: 178 RRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLVYTFTTPKL 357
           RRKI+I+FI++ +RRHITFSKRKAGIMKKAYE               +TGLVYTFTTPKL
Sbjct: 100 RRKIKIEFIEDDARRHITFSKRKAGIMKKAYELATLTGTQVLLLVVSQTGLVYTFTTPKL 159

Query: 358 QPLVTKSEGKNLIQACLNAPEEGLGDDQENQSDGNTGDSPDQS 486
           Q LVT++EG+NLIQACLNAP+   G  +    D ++GD P ++
Sbjct: 160 QALVTQAEGRNLIQACLNAPDPPNGGGESGGED-HSGDEPSEA 201


>O76853|SRFA|O76853 (TrEMBL: Dictyostelium discoideum (Slime mold))
           SRF related protein.
          Length = 420

 Score =  114 bits (284), Expect = 2e-24
 Identities = 59/108 (54%), Positives = 69/108 (63%)
 Frame = +1

Query: 148 GTSQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETG 327
           G   GK +  RRKI+I+FI +KSRRHITFSKRKAGIMKKAYE               ETG
Sbjct: 60  GECNGK-KAGRRKIKIEFIDDKSRRHITFSKRKAGIMKKAYELSTLTGTQVLLLVASETG 118

Query: 328 LVYTFTTPKLQPLVTKSEGKNLIQACLNAPEEGLGDDQENQSDGNTGD 471
            VYTF T KLQPL+T+ EGKNLIQ+CLN P+        NQ+  N  +
Sbjct: 119 HVYTFATAKLQPLITRPEGKNLIQSCLNTPDNPNSPSMANQNSNNNSN 166


>P07249|ARGR1|ARG1_YEAST (SP: Saccharomyces cerevisiae (Baker's
           yeast)) Arginine metabolism regulation protein I.
          Length = 177

 Score = 97.8 bits (242), Expect = 1e-19
 Identities = 51/110 (46%), Positives = 67/110 (60%)
 Frame = +1

Query: 178 RRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLVYTFTTPKL 357
           RRK  I++I+ K+RRH+TFSKR+ GIMKKAYE                +GLVYTFTTPKL
Sbjct: 80  RRKQPIRYIENKTRRHVTFSKRRHGIMKKAYELSVLTGANILLLILANSGLVYTFTTPKL 139

Query: 358 QPLVTKSEGKNLIQACLNAPEEGLGDDQENQSDGNTGDSPDQSPAPATNP 507
           +P+V + EGK+LI+AC+NA               +T D+ D SPA   +P
Sbjct: 140 EPVVREDEGKSLIRACINA--------------SDTPDATDTSPAQEQSP 175


>Q9U613|SRF|Q9U613 (TrEMBL: Artemia sanfranciscana (Brine shrimp)
           (Artemia franciscana)) Serum response factor.
          Length = 317

 Score = 97.4 bits (241), Expect = 2e-19
 Identities = 65/186 (34%), Positives = 82/186 (44%), Gaps = 29/186 (15%)
 Frame = +1

Query: 154 SQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLV 333
           + GK  K R KI+++FI  K RR+ TFSKRK GIMKKAYE               ETG V
Sbjct: 107 ANGKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHV 166

Query: 334 YTFTTPKLQPLVTKSEGKNLIQACLNAPE--EGLGDD-------QENQSDGNTGDS---- 474
           YTF T KLQP++T   GK LIQ CLN+P+   G GD        +E +   N  D     
Sbjct: 167 YTFATRKLQPMITSEAGKALIQTCLNSPDPPNGSGDQRMSATGFEETELTYNVQDDDQKV 226

Query: 475 ----------PDQSP-----APATNPNVMGAAGHAHH-IXXXXXXXXXXXXXXXXXMAPM 606
                     P  +P      P  +P   G+  H HH +                  +P 
Sbjct: 227 RQMMYSGHIPPSSTPHHLLSHPLQSPQYGGSMNHPHHGLLPPVSNSSSYSMHGSPTSSPH 286

Query: 607 PSHGLP 624
           P H +P
Sbjct: 287 PHHFVP 292


>Q9XYR1|SRF|Q9XYR1 (TrEMBL: Junonia coenia (Peacock butterfly)
           (Precis coenia)) Serum response factor (Fragment).
          Length = 125

 Score = 96.7 bits (239), Expect = 3e-19
 Identities = 49/102 (48%), Positives = 60/102 (58%)
 Frame = +1

Query: 154 SQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLV 333
           S GK  K R KI++++I  K RR+ TFSKRK GIMKKAYE               ETG V
Sbjct: 6   SNGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHV 65

Query: 334 YTFTTPKLQPLVTKSEGKNLIQACLNAPEEGLGDDQENQSDG 459
           YTF T KLQP++T   GK LIQ CLN+P+     +Q   + G
Sbjct: 66  YTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTSEQRMAATG 107


>Q9JM73|SRF|Q9JM73 (TrEMBL: Mus musculus (Mouse)) Serum response
           factor (Srf protein).
          Length = 504

 Score = 94.7 bits (234), Expect = 1e-18
 Identities = 53/113 (46%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
 Frame = +1

Query: 148 GTSQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETG 327
           G   GK  + R KI+++FI  K RR+ TFSKRK GIMKKAYE               ETG
Sbjct: 129 GAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETG 188

Query: 328 LVYTFTTPKLQPLVTKSEGKNLIQACLNAPEE-GLGDDQENQSDGNTG-DSPD 480
            VYTF T KLQP++T   GK LIQ CLN+P+     D   +Q    TG + PD
Sbjct: 189 HVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEEPD 241


>Q24535|BS|SRF_DROME (SP: Drosophila melanogaster (Fruit fly)) Serum
           response factor homolog (dSRF) (Blistered protein).
          Length = 450

 Score = 94.7 bits (234), Expect = 1e-18
 Identities = 56/130 (43%), Positives = 70/130 (53%), Gaps = 13/130 (10%)
 Frame = +1

Query: 154 SQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLV 333
           + GK  K R KI++++I  K RR+ TFSKRK GIMKKAYE               ETG V
Sbjct: 159 ANGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHV 218

Query: 334 YTFTTPKLQPLVTKSEGKNLIQACLNAPEE---GLGDD-------QENQSDGNTGD---S 474
           YTF T KLQP++T   GK LIQ CLN+P+    G GD        +E +   N  D    
Sbjct: 219 YTFATRKLQPMITSEAGKQLIQTCLNSPDPPSVGGGDQRMSATGFEETELSYNIADEDSK 278

Query: 475 PDQSPAPATN 504
            D+SP  + N
Sbjct: 279 DDRSPTSSGN 288


>Q9W182|BS|Q9W182 (TrEMBL: Drosophila melanogaster (Fruit fly)) BS
           gene product (RE17834p).
          Length = 449

 Score = 94.7 bits (234), Expect = 1e-18
 Identities = 56/130 (43%), Positives = 70/130 (53%), Gaps = 13/130 (10%)
 Frame = +1

Query: 154 SQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLV 333
           + GK  K R KI++++I  K RR+ TFSKRK GIMKKAYE               ETG V
Sbjct: 159 ANGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHV 218

Query: 334 YTFTTPKLQPLVTKSEGKNLIQACLNAPEE---GLGDD-------QENQSDGNTGD---S 474
           YTF T KLQP++T   GK LIQ CLN+P+    G GD        +E +   N  D    
Sbjct: 219 YTFATRKLQPMITSEAGKQLIQTCLNSPDPPSVGGGDQRMSATGFEETELSYNIADEDSK 278

Query: 475 PDQSPAPATN 504
            D+SP  + N
Sbjct: 279 DDRSPTSSGN 288


>Q9YH93|SRF|Q9YH93 (TrEMBL: Brachydanio rerio (Zebrafish) (Danio
           rerio)) Serum response factor.
          Length = 247

 Score = 94.4 bits (233), Expect = 1e-18
 Identities = 47/91 (51%), Positives = 56/91 (61%)
 Frame = +1

Query: 148 GTSQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETG 327
           G   GK  + R KI+++FI  K RR+ TFSKRK GIMKKAYE               ETG
Sbjct: 112 GAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETG 171

Query: 328 LVYTFTTPKLQPLVTKSEGKNLIQACLNAPE 420
            VYTF T KLQP++T   GK LIQ CLN+P+
Sbjct: 172 HVYTFATRKLQPMITSETGKALIQTCLNSPD 202


>P23790||SRF_XENLA (SP: Xenopus laevis (African clawed frog)) Serum
           response factor (SRF).
          Length = 448

 Score = 94.4 bits (233), Expect = 1e-18
 Identities = 47/91 (51%), Positives = 56/91 (61%)
 Frame = +1

Query: 148 GTSQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETG 327
           G   GK  + R KI+++FI  K RR+ TFSKRK GIMKKAYE               ETG
Sbjct: 88  GAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETG 147

Query: 328 LVYTFTTPKLQPLVTKSEGKNLIQACLNAPE 420
            VYTF T KLQP++T   GK LIQ CLN+P+
Sbjct: 148 HVYTFATRKLQPMITSETGKALIQTCLNSPD 178


>P11831|SRF|SRF_HUMAN (SP: Homo sapiens (Human)) Serum response
           factor (SRF).
          Length = 508

 Score = 94.4 bits (233), Expect = 1e-18
 Identities = 47/91 (51%), Positives = 56/91 (61%)
 Frame = +1

Query: 148 GTSQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETG 327
           G   GK  + R KI+++FI  K RR+ TFSKRK GIMKKAYE               ETG
Sbjct: 133 GAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETG 192

Query: 328 LVYTFTTPKLQPLVTKSEGKNLIQACLNAPE 420
            VYTF T KLQP++T   GK LIQ CLN+P+
Sbjct: 193 HVYTFATRKLQPMITSETGKALIQTCLNSPD 223


>Q7ZUA3||Q7ZUA3 (TrEMBL: Brachydanio rerio (Zebrafish) (Danio
           rerio)) Hypothetical protein.
          Length = 520

 Score = 94.4 bits (233), Expect = 1e-18
 Identities = 47/91 (51%), Positives = 56/91 (61%)
 Frame = +1

Query: 148 GTSQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETG 327
           G   GK  + R KI+++FI  K RR+ TFSKRK GIMKKAYE               ETG
Sbjct: 93  GAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETG 152

Query: 328 LVYTFTTPKLQPLVTKSEGKNLIQACLNAPE 420
            VYTF T KLQP++T   GK LIQ CLN+P+
Sbjct: 153 HVYTFATRKLQPMITSETGKALIQTCLNSPD 183


>O62543||O62543 (TrEMBL: Geodia cydonium (Sponge)) Serum response
           factor.
          Length = 383

 Score = 94.0 bits (232), Expect = 2e-18
 Identities = 47/99 (47%), Positives = 60/99 (60%)
 Frame = +1

Query: 160 GKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLVYT 339
           GK  + R KI++++IQ K RR+ TFSKRK+G+MKKAYE               ETG VYT
Sbjct: 56  GKKTRGRVKIQMEYIQNKLRRYTTFSKRKSGMMKKAYELSTLTGTQVMLLVASETGHVYT 115

Query: 340 FTTPKLQPLVTKSEGKNLIQACLNAPEEGLGDDQENQSD 456
           F TPKLQP++T   GK LIQ CL+ P+        +Q D
Sbjct: 116 FATPKLQPMITSEAGKALIQTCLHQPDPAPMGQGPHQGD 154


>Q18955|D1081.2|Q18955 (TrEMBL: Caenorhabditis elegans) D1081.2
           protein.
          Length = 327

 Score = 93.2 bits (230), Expect = 3e-18
 Identities = 49/109 (44%), Positives = 66/109 (60%), Gaps = 5/109 (4%)
 Frame = +1

Query: 160 GKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLVYT 339
           GK  K R KI++++I  K RR+ TFSKRK GIMKKA+E               ETG VYT
Sbjct: 41  GKKTKGRVKIKMEYINNKLRRYTTFSKRKTGIMKKAFELSTLTGTQVMLLVASETGHVYT 100

Query: 340 FTTPKLQPLVTKSEGKNLIQACLNAPEEGLGDDQENQSD-----GNTGD 471
           + TPKLQP+++   GK +IQ+CLNAP     D Q ++++     GN G+
Sbjct: 101 YATPKLQPMISSDTGKAMIQSCLNAPGGDGSDVQPSRTEFTFDSGNGGN 149


>Q90718|SRF|SRF_CHICK (SP: Gallus gallus (Chicken)) Serum response
           factor (SRF) (Fragment).
          Length = 375

 Score = 92.4 bits (228), Expect = 5e-18
 Identities = 46/87 (52%), Positives = 55/87 (63%)
 Frame = +1

Query: 160 GKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLVYT 339
           GK  + R KI+++FI  K RR+ TFSKRK GIMKKAYE               ETG VYT
Sbjct: 4   GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 63

Query: 340 FTTPKLQPLVTKSEGKNLIQACLNAPE 420
           F T KLQP++T   GK LIQ CLN+P+
Sbjct: 64  FATRKLQPMITSETGKALIQTCLNSPD 90


>Q964I0|SRF|Q964I0 (TrEMBL: Hydra attenuata (Hydra) (Hydra
           vulgaris)) Serum response factor.
          Length = 417

 Score = 92.4 bits (228), Expect = 5e-18
 Identities = 46/86 (53%), Positives = 55/86 (63%)
 Frame = +1

Query: 163 KTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLVYTF 342
           K  + R KI+++FIQ K RR+ TFSKRK GIMKKAYE               ETG VYTF
Sbjct: 97  KKTRGRVKIKMEFIQNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTF 156

Query: 343 TTPKLQPLVTKSEGKNLIQACLNAPE 420
            T KLQP++T   GK LIQ CLN+P+
Sbjct: 157 ATRKLQPMITSESGKALIQTCLNSPD 182


>Q8SUU7|ECU07_1740|Q8SUU7 (TrEMBL: Encephalitozoon cuniculi) MADS
           domain.
          Length = 211

 Score = 72.8 bits (177), Expect = 4e-12
 Identities = 39/91 (42%), Positives = 56/91 (61%)
 Frame = +1

Query: 148 GTSQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETG 327
           G S GK     +KI++++I  K++R + FSKRK GIMKKAYE               E+G
Sbjct: 92  GKSHGK-----KKIKLEYISGKNKRSVCFSKRKRGIMKKAYELNILTGTEILLLVASESG 146

Query: 328 LVYTFTTPKLQPLVTKSEGKNLIQACLNAPE 420
            V+TF T KL+P++  +E +++IQ CLN PE
Sbjct: 147 HVFTFATEKLKPII--AEHEDIIQNCLNRPE 175


>P78926|MAP1|MAP1_SCHPO (SP: Schizosaccharomyces pombe (Fission
           yeast)) Pheromone receptor transcription activator (MAP1
           protein).
          Length = 398

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
 Frame = +1

Query: 148 GTSQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETG 327
           G+SQG +          +++++ +R  TF+KRKAGI KKA E               ETG
Sbjct: 20  GSSQGNS----------YLEDRQKRQNTFTKRKAGIFKKANELALLTGSEVMVLVVSETG 69

Query: 328 LVYTFTTPKLQPLVTKSEGKNLI-QACLNA--PEEGLGDDQENQSDGNTGDSPDQSPAPA 498
           LV+TF+TPKL+ +V   EG+ LI ++ +NA   +      Q  QS     DS    P   
Sbjct: 70  LVHTFSTPKLENVVKSPEGQKLITESLINATTDQNESQASQAKQSSAQLSDSESGYPLDH 129

Query: 499 TNPNVMGAAGHAH 537
               +    G +H
Sbjct: 130 EEMRISEENGPSH 142


>Q9U325|W10D5.1|Q9U325 (TrEMBL: Caenorhabditis elegans) W10D5.1
           protein.
          Length = 340

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
 Frame = +1

Query: 178 RRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLVYTFTTPKL 357
           R+KI+I  IQ++  R +TF+KRK G+MKKAYE                T  ++ + +  +
Sbjct: 3   RKKIQITRIQDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIVFNSTNKLFQYASTDM 62

Query: 358 QPLVTKSEGKNLIQACL--NAPEEGLGDDQENQSDGNTGDSPDQSPAPATNP 507
             ++ K    N        N   E L   + NQ  GN   S D+SP P+T+P
Sbjct: 63  DKVLLKYTEYNEPHESRTNNDIMEALNRKEGNQGGGN---SDDESPGPSTSP 111


>Q27339|MEF-2|Q27339 (TrEMBL: Caenorhabditis elegans) CEMEF-2.
          Length = 340

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
 Frame = +1

Query: 178 RRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLVYTFTTPKL 357
           R+KI+I  IQ++  R +TF+KRK G+MKKAYE                T  ++ + +  +
Sbjct: 3   RKKIQITRIQDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIVFNSTNKLFQYASTDM 62

Query: 358 QPLVTKSEGKNLIQACL--NAPEEGLGDDQENQSDGNTGDSPDQSPAPATNP 507
             ++ K    N        N   E L   + NQ  GN   S D+SP P+T+P
Sbjct: 63  DKVLLKYTEYNEPHESRTNNDIMEALNRKEGNQGGGN---SDDESPGPSTSP 111


>Q964H9|SRF|Q964H9 (TrEMBL: Hydractinia echinata (Snail fur)) Serum
           response factor (Fragment).
          Length = 140

 Score = 55.1 bits (131), Expect = 9e-07
 Identities = 28/57 (49%), Positives = 34/57 (59%)
 Frame = +1

Query: 157 QGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETG 327
           +GK  + R KI+++FIQ K RR+ TFSKRK GIMKKAYE               ETG
Sbjct: 84  RGKKTRGRVKIKMEFIQNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETG 140


>Q40767|DAL3|Q40767 (TrEMBL: Picea abies (Norway spruce) (Picea
           excelsa)) DAL3 protein.
          Length = 203

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
 Frame = +1

Query: 148 GTSQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETG 327
           G    KT+  R K ++K I+  + R +TFSKR+ G++KKAYE                 G
Sbjct: 8   GKGVQKTRMVRGKTQMKRIENDTSRQVTFSKRRNGLLKKAYELSVLCDAEVALIVFSPRG 67

Query: 328 LVYTFTTPKLQPLVTK----SEGKN 390
            +Y F  P +Q ++ +    SEG N
Sbjct: 68  KLYEFANPSMQKMLERYDKCSEGSN 92


>Q9SEE0|DAL12|Q9SEE0 (TrEMBL: Picea abies (Norway spruce) (Picea
           excelsa)) MADS-box transcription factor.
          Length = 238

 Score = 50.1 bits (118), Expect = 3e-05
 Identities = 30/90 (33%), Positives = 44/90 (48%)
 Frame = +1

Query: 178 RRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLVYTFTTPKL 357
           R KIEIK I+  + R +TFSKRKAG+ KKA E                +G  Y +++P  
Sbjct: 3   RGKIEIKKIENLTNRQVTFSKRKAGLQKKAKELSILCSAEVALIIFSSSGKHYEYSSP-- 60

Query: 358 QPLVTKSEGKNLIQACLNAPEEGLGDDQEN 447
                 S  + +++  +N     LG+DQ N
Sbjct: 61  -----CSSVEQIVEKYMNVSGSKLGEDQIN 85


>Q9SEE1|DAL12|Q9SEE1 (TrEMBL: Picea abies (Norway spruce) (Picea
           excelsa)) MADS-box transcription factor.
          Length = 236

 Score = 50.1 bits (118), Expect = 3e-05
 Identities = 30/90 (33%), Positives = 44/90 (48%)
 Frame = +1

Query: 178 RRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLVYTFTTPKL 357
           R KIEIK I+  + R +TFSKRKAG+ KKA E                +G  Y +++P  
Sbjct: 3   RGKIEIKKIENLTNRQVTFSKRKAGLQKKAKELSILCSAEVALIIFSSSGKHYEYSSP-- 60

Query: 358 QPLVTKSEGKNLIQACLNAPEEGLGDDQEN 447
                 S  + +++  +N     LG+DQ N
Sbjct: 61  -----CSSVEQIVEKYMNVSGSKLGEDQIN 85


>O82095|CMADS4|O82095 (TrEMBL: Ceratopteris richardii (Triangle
           waterfern)) MADS-box protein.
          Length = 240

 Score = 48.9 bits (115), Expect = 6e-05
 Identities = 22/66 (33%), Positives = 38/66 (57%)
 Frame = +1

Query: 178 RRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLVYTFTTPKL 357
           RRK++IK I+  + R ITFSKR+AG+ KKA++               E G ++ F +P +
Sbjct: 3   RRKVKIKRIENGATRQITFSKRRAGLFKKAHDLSVLCDAKVAVIVFSEKGRLFEFASPSM 62

Query: 358 QPLVTK 375
           + ++ +
Sbjct: 63  ESILKR 68


>Q9ST07|GPMADS1|Q9ST07 (TrEMBL: Gnetum parvifolium) GpMADS1 protein.
          Length = 218

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 19/66 (28%), Positives = 39/66 (59%)
 Frame = +1

Query: 178 RRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLVYTFTTPKL 357
           + K+++  I+  +RR +TFSKR+ G++KKA+E               E+G ++ F+ P++
Sbjct: 3   KTKLQLSRIESSTRRKVTFSKRRNGLLKKAFELSVLCDADIALLVFSESGKLHQFSNPEM 62

Query: 358 QPLVTK 375
             ++T+
Sbjct: 63  NMIITR 68


>Q41828|ZAG4|Q41828 (TrEMBL: Zea mays (Maize)) MADS box protein
           (Fragment).
          Length = 159

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 24/68 (35%), Positives = 34/68 (50%)
 Frame = +1

Query: 151 TSQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGL 330
           TS G  ++ R KIEIK I+  + R +TF KR+  ++KKAYE                 G 
Sbjct: 64  TSSGGDRQGRGKIEIKHIENTTNRQVTFCKRRNSLLKKAYELSVLCDAEVALVVFSSRGR 123

Query: 331 VYTFTTPK 354
           +Y F  P+
Sbjct: 124 LYEFDMPR 131


>Q9LSR6||Q9LSR6 (TrEMBL: Arabidopsis thaliana (Mouse-ear cress))
           MADS box transcription factor-like.
          Length = 231

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
 Frame = +1

Query: 178 RRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGLVYTFTT--- 348
           RRK+EIK I+ KS R +TF KR+ G+M+KA +                TG +Y+F++   
Sbjct: 3   RRKVEIKRIENKSSRQVTFCKRRNGLMEKARQLSILCESSVALIIISATGRLYSFSSGDS 62

Query: 349 -PKLQPLVTKSEGKNLIQACLNAPE 420
             K+       +  +L   CLN  E
Sbjct: 63  MAKILSRYELEQADDLKTLCLNIVE 87


>Q9LN16|T13M22.2|Q9LN16 (TrEMBL: Arabidopsis thaliana (Mouse-ear
           cress)) T13M22.2 protein.
          Length = 217

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 23/64 (35%), Positives = 35/64 (54%)
 Frame = +1

Query: 151 TSQGKTQKERRKIEIKFIQEKSRRHITFSKRKAGIMKKAYEXXXXXXXXXXXXXXXETGL 330
           T   KT + R+KIEIK I+E+++R +TFSKR+ G+ KK+ E               +   
Sbjct: 40  TQTPKTTRGRQKIEIKKIEEETKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCDR 99

Query: 331 VYTF 342
           +Y F
Sbjct: 100 IYRF 103


  Database: sptrembl
    Posted date:  Oct 14, 2003  6:47 PM
  Number of letters in database: 339,323,595
  Number of sequences in database:  1,070,300
  
Lambda     K      H
   0.309    0.128    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169,756,725
Number of Sequences: 1070300
Number of extensions: 2953786
Number of successful extensions: 9632
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9615
length of database: 339,323,595
effective HSP length: 119
effective length of database: 211,957,895
effective search space used: 30098021090
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)