Query:  Candida_albicans_chr7-f2-534890-538246-22  

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
AAA        ATPase family associated with various cell   322.1    6.5e-93   2
NACHT      NACHT domain                                 -46.1          1   1
SPX        SPX domain                                   -68.3        7.7   1
ABC_tran   ABC transporter                              -69.4        8.3   1
Torsin     Torsin                                      -187.8       0.43   1
Yeast_VAR1 Mitochondrial ribosomal protein (VAR1)      -230.0        5.8   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
ABC_tran     1/1     518   672 ..     1   199 []   -69.4      8.3
NACHT        1/1     519   676 ..     1   210 []   -46.1        1
SPX          1/1     559   677 ..     1   327 []   -68.3      7.7
Torsin       1/1     480   711 ..     1   296 []  -187.8     0.43
AAA          1/2     520   713 ..     1   216 []    41.9  1.4e-08
Yeast_VAR1   1/1     526   837 ..     1   413 []  -230.0      5.8
AAA          2/2     798   982 ..     1   216 []   280.2  2.7e-80

Alignments of top-scoring domains:
ABC_tran: domain 1 of 1, from 518 to 672: score -69.4, E = 8.3
                   *->GevlalvGpNGaGKSTLLklisGllp.........pteGtilldGar
                      +  + + G +G+GK+ LLkl + +l ++++  ++ +   ti  ++  
  Candida_al   518    NTGTLVYGNSGSGKTLLLKLVAQQLNqqhgyftkyISCDTIMNEN-- 562  

                   dlsdlsklkerleslrknigvvfQdptlfpnpeltvreniafglrlslgl
                     + ls  k +  +++        +   +  p+  +++ni+         
  Candida_al   563 -FQNLS--KNHFFKWI--------QTCAWNKPSVLILDNIDKLMSV---- 597  

                   skdeqddrlkkagaeelLerlglgyddlldrrpgtLSGGqkQRvaiARaL
                   + + +d+          L+++++ + ++++                    
  Candida_al   598 EMENMDAT-----KSNQLTEFFISNLTKIHH------------------- 623  

                   ltkpklLlLDEPTagLDpasraqllellrelrqqggTvllitHdldlldr
                    ++++l +L      L ++s++++ +ll         ++   H+l+   +
  Candida_al   624 QLNSNLSIL------LSANSKDNINKLLLGS-----HLIENFHHLNP-PD 661  

                   laDrilvledG<-*
                    + r  +l++    
  Candida_al   662 KSLRFEILDKY    672  

NACHT: domain 1 of 1, from 519 to 676: score -46.1, E = 1
                   *->rtvilqGeAGsGKTtLlqklallWaqgklpqgarfdfvFflscrels
                         +++G +GsGKT Ll+ +a+++ q +        f  ++sc ++ 
  Candida_al   519    TGTLVYGNSGSGKTLLLKLVAQQLNQQH------GYFTKYISCDTIM 559  

                   rsgeaaalLrsLadlLfsqwpepaapvreKlfeskvwavllelperlLkS
                     +          + L ++   ++   +              + + +L  
  Candida_al   560 NEN---------FQNLSKNHFFKWIQTCA------------WNKPSVL-- 586  

                   aldppgqttvlilDGlDElvsdlgqpdgelctdwkepqpvrtLLssL..l
                              ilD +D l s    +++e     k  q +   +s+L+++
  Candida_al   587 -----------ILDNIDKLMS----VEMENMDATKSNQLTEFFISNLtkI 621  

                   rkkLlpgaslLlTsRPdalrkwllrrgLespakRLLEL.qearylevrgF
                      L ++ s+Ll++ +       +  +L  +      L +++++l  +  
  Candida_al   622 HHQLNSNLSILLSANSKDN----INKLLLGS-----HLiENFHHLNPPD- 661  

                   seedrkeyvrkyfsde<-*
                    ++ r+e++ ky+ ++   
  Candida_al   662 -KSLRFEILDKYLTNK    676  

SPX: domain 1 of 1, from 559 to 677: score -68.3, E = 7.7
                   *->MKFGkkLsnqmlevPEWreqYidYkeLKkllKeiqekkpsgnndgsh
                      M   + ++n +      ++++       k + ++  +kps+      
  Candida_al   559    MN--ENFQNLS------KNHFF------KWIQTCAWNKPSV------ 585  

                   issetssdvvtlednreglgs.rsddkRsfaKkKkaldsvieeEegilte
                                     l++++ d      K+                 
  Candida_al   586 ------------------LILdNID------KLM---------------- 595  

                   lvktkvkkasseyettflmas.wgeefeedFfeaLdkELeKVntFyleke
                                       s ++e+ +++ +++L        +F+   +
  Candida_al   596 --------------------SvEMENMDATKSNQLT-------EFF---I 615  

                   aElrkrfdeLekqldaleaerdktsdplgwseertvemsrtaaseyltla
                   + l k ++ L+++l+ l                                 
  Candida_al   616 SNLTKIHHQLNSNLSILL-------------------------------- 633  

                   ekistvaiskesessihenissgessddkpseddndknrrkledretnds
                                                                     
  Candida_al     - -------------------------------------------------- -    

                   sltiksalsaskqeleaytksrkknlrlvekkLkkafiefyleLqlLknY
                                                 ++ k ++  + l  +l +n+
  Candida_al   634 -----------------------------SANSKDNINKLLLGSHLIENF 654  

                   seLNaTGFrKIlKKyDKllgsnlkkpylasvv<-*
                   ++LN           DK l+ +  ++yl+  +   
  Candida_al   655 HHLNPP---------DKSLRFEILDKYLTNKL    677  

Torsin: domain 1 of 1, from 480 to 711: score -187.8, E = 0.43
                   *->CrFaeCCgrGdkrIsfnltgLek.DLarrLfGQHLvkklVVrsvKgh
                       +F e     dk + ++ ++ e+  L+++      v ++V     ++
  Candida_al   480    -SFIEQEI--DKPTTNDTEEQEAiGLDNT------VEDIV----DSF 513  

                   ienpnkPrKPLVLSFHGwtGTGKNfVaeiIaeNlYRdGLrSdyVhhFvAt
                   i +  + +  LV    G +G+GK  + ++ a+ l     +  y +++++ 
  Candida_al   514 ITSD-NTG-TLVY---GNSGSGKTLLLKLVAQQLNQ---QHGYFTKYISC 555  

                   fhFPhpsyvelYKeeLknqiretlraCqRSiFIFDEaDKLpsGLlevlkP
                       +++   l K     +i++ ++    S  I D  DKL s  +e    
  Candida_al   556 DTIMNENFQNLSKNHFFKWIQTCAWN-KPSVLILDNIDKLMSVEMENM-- 602  

                   FLDyyaPaVdGvdfrKAIFIFLSNkGGseIaevaLellksGksREeirLk
                     D         +++ + F F+SN+     + +   l  +  +       
  Candida_al   603 --DATK------SNQLTEF-FISNL-----TKIHHQLNSNLSI------- 631  

                   hfEptLsaavfNnedgGfwhSeLIen..hLIDhFiPFLPLekkHVrlCvr
                       +Lsa + +n++  +  S LIen +hL        P  k      + 
  Candida_al   632 ----LLSANSKDNINKLLLGSHLIENfhHLN-------PPDKSLRFEILD 670  

                   veLLrkRGrhdLakdeeivqrVldsltyFPeeeklFSSsGCKtVsaKldl
                    +L  k+G   L ++++ ++ V +   y P   k+ S+        ++  
  Candida_al   671 KYLTNKLG---LKIKVDLMDLVSETEGYLPNDLKILSD--------RIYH 709  

                   fl<-*
                   +    
  Candida_al   710 EV    711  

AAA: domain 1 of 2, from 520 to 713: score 41.9, E = 1.4e-08
                   *->gvLLyGPPGtGKTlLAkavAnelg....vpfisisgselvskyv.Ge
                      g L yG  G+GKTlL k vA++l++++++    is+  ++++ ++  
  Candida_al   520    GTLVYGNSGSGKTLLLKLVAQQLNqqhgYFTKYISCDTIMNENFqNL 566  

                   sekrvralfelArkslkkaaPspiiFIDEiDalapkRgd.....egdvss
                   s  +  + ++   ++    +Ps ++++D iD+l +   ++ + + +    
  Candida_al   567 SKNHFFKWIQTCAWN----KPS-VLILDNIDKLMSVEMEnmdatKSNQLT 611  

                   rvvnqLLtemDLerigfekhylrgsdvvDlsnvlviaaTNrpdlldpaLl
                   + ++  Lt++         h l       +sn  +++++N +d + + Ll
  Candida_al   612 EFFISNLTKIH--------HQL-------NSNLSILLSANSKDNINKLLL 646  

                   rpGRfdreievplPdeeerleIlkihlkkmplalcqerselakdvdleel
                       ++ +  +  Pd+  r+eIl ++l + +l+l+        +vdl+  
  Candida_al   647 GSHLIENFHHLNPPDKSLRFEILDKYLTN-KLGLK-------IKVDLMD- 687  

                   akelArrtpgfsgadlaalcreAalralr<-*
                      l++ t+g+   dl+ l  +  +  l    
  Candida_al   688 ---LVSETEGYLPNDLKILSDRIYHEVLF    713  

Yeast_VAR1: domain 1 of 1, from 526 to 837: score -230.0, E = 5.8
                   *->kklllKnyLlklnnnrmnYnmdknikNnny.dkYlnEyNNkgnKLQh
                      +    K +Llkl    +n           y  kY++    ++   Q+
  Candida_al   526    NSGSGKTLLLKLVAQQLN----QQHG---YfTKYISCDTIMNENFQN 565  

                   i..NnMNnWnnQlYnyNKNnvINtlindkLvnKLLyKLmklkvniINNns
                   +++N    W  Q   +NK  v+   i+d+       KLm++    + N+ 
  Candida_al   566 LskNHFFKW-IQTCAWNKPSVL---ILDNI-----DKLMSVE---MENMD 603  

                   ylvnnkqikkIiinKPkfkhtiN.kvnIkFyYiLssynnninniNNnntn
                       n+     i n +k  h +N+ + I    +Ls +  +     N n +
  Candida_al   604 ATKSNQLTEFFISNLTKIHHQLNsNLSI----LLSANSKD-----NINKL 644  

                   YYmnminklmNiLnifNykNnNninmnnNls.NiLSyyY.NK...KViIE
                     ++ +      Ln            + +l   iL +y +NK + K+ + 
  Candida_al   645 LLGSHLIENFHHLN----------PPDKSLRfEILDKYLtNKlglKIKVD 684  

                   siKLk.....YvYNnndIlnKyISlnDmdKynnGllgktYsklLnnimPk
                      L +++++Y+ N+  Il+  I     + + n   ++t   +  +    
  Candida_al   685 LMDLVsetegYLPNDLKILSDRI---YHEVLFNSTETETETETEATTNAA 731  

                   lNshnIsmN...YinNInNiNniKYiNNmINLLnnnnnnnsnNsLnnnnn
                     s  I     +Y  +  N + +K+                  s+     
  Candida_al   732 VTSEHIEKAlagYTPS--NLRGVKL---------------QKSSI----- 759  

                   nyidNInnIYnnlnINkIsmdLLmyKYLiGwsilfKGrlnknAGisRsik
                       N  +I    +  +I  + L       w  ++     +     R   
  Candida_al   760 ----NWSDIGGLKEAKNILLETLE------WPTKYAPIFANC--PLRLRS 797  

                   tkLlnGSlsNKlY...lKnSnlLssslikNNNNtlKllsfnintdlNINk
                    +Ll+G      Y++ +K                  ll +       I  
  Candida_al   798 GILLYG------YpgcGKT-----------------LLAS------AIAG 818  

                   nYKLNYIpnnHnIynnnnVNKvKnGkYnIkVKLNyI<-*
                      LN I+    I      N              yI   
  Candida_al   819 QCGLNFIS----IKGPEILN-------------KYI    837  

AAA: domain 2 of 2, from 798 to 982: score 280.2, E = 2.7e-80
                   *->gvLLyGPPGtGKTlLAkavAnelgvpfisisgselvskyvGesekrv
                      g+LLyG PG+GKTlLA a+A+++g++fisi+g+e+++ky+G se+ v
  Candida_al   798    GILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSV 844  

                   ralfelArkslkkaaPspiiFIDEiDalapkRgd.egdvssrvvnqLLte
                   r+lfe+A ++    +P+ i+F+DE+D++apkRg ++ +v++rvvnq Lt+
  Candida_al   845 RELFERAQAA----KPC-ILFFDEFDSIAPKRGHdSTGVTDRVVNQMLTQ 889  

                   mDLerigfekhylrgsdvvDlsnvlviaaTNrpdlldpaLlrpGRfdrei
                   mD    g e+          l++v v+aaT rpdl+d+aLlrpGR+d+ +
  Candida_al   890 MD----GAEG----------LDGVYVLAATSRPDLIDSALLRPGRLDKSV 925  

                   evplPdeeerleIlkihlkkmplalcqerselakdvdleelakelArrtp
                    ++ P+ e+rl Il+ ++ km l+         +dv+l+e    +A++t 
  Candida_al   926 ICDMPNYEDRLDILQSITTKMDLS---------DDVNLHE----IAEKTT 962  

                   gfsgadlaalcreAalralr<-*
                   gfsgad++ l  +A l+a+    
  Candida_al   963 GFSGADMQGLGYNAYLKAVH    982  

//