Query: Candida_albicans_chr7-f3-165660-168671-18 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Yeast_VAR1 Mitochondrial ribosomal protein (VAR1) -220.5 2.4 1 DUF229 Protein of unknown function (DUF229) -298.2 7.5 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Yeast_VAR1 1/1 255 541 .. 1 413 [] -220.5 2.4 DUF229 1/1 502 935 .. 1 561 [] -298.2 7.5 Alignments of top-scoring domains: Yeast_VAR1: domain 1 of 1, from 255 to 541: score -220.5, E = 2.4 *->kklllKnyLlklnnnrmnYnmdknikNnnydkYlnEyNNkgnKLQhi k ++ n n m+ ++ d Y KLQ+ Candida_al 255 CKFIN-------NENFMK-----FLN----DYY---------KLQND 276 NnMNnWnnQlYnyNKNnvINtlindkLvnKLLyKLmklkvniINNnsylv + IN i Lv +KL ++ + N Candida_al 277 DDDDEED---------DKINLKIKG-LVKQVKIKLWWMISYDVENI---- 312 nnkqikkIiinKPkfkh.tiNkvnI.kFyYiLssynnninniNNnntnYY + +++kh+ i +vnI+kF+ y + +N+ + Candida_al 313 ------EFYKDVTIYKHdIIPTVNIdKFNL----YSTI----DNKGND-- 346 mnmin.klmNiLnifNykNnNninmnnNlsNiLSyyYNKKViIEsiKLkY +in k++ i ++ iLS N K i + Candida_al 347 --IINiKINALIE---------IPKF-----ILSSIPNLKFKFGFINWNL 380 vYNnndIlnKyI......SlnDmdKynnGllgktYsklLnnimPklNshn N+ d K I+ + +S + G + Y+ +L +++ N + Candida_al 381 FFNDCDGIDKLIkvgywqSCPFQIVHQEG--ENLYQPILLTVIG--NISS 426 IsmNYinNInNiNniK..YiNNmINLLnnnnnnnsnNsLnnnnnnyidNI I +n N+N K+++ N + L +L +n+ i+ Candida_al 427 IPDELMNECPNNNDGKspL-NKI---L--------QKYL---DNEPIEFY 461 nnIYnnlnINkIsmdL..LmyKYL....iGwsilfKGrlnknAGisRsik + +l+ N + +++ +K L++++i ++i + ++ Candida_al 462 LQLLSSLDEND--NGIpdWLFKFLhdtpIKLTITLPKMNIDQ-------- 501 tkLlnGSlsNKlYlKnSnlLssslikNNNNtlKllsfnintdlNINknYK + l IN + Candida_al 502 -------FDFHENLEI----------------------------INHSSE 516 LNYIpnnHnIynnnnVNKvKnGkYnIkVKLNyI<-* ++n ++ n N I++ +I Candida_al 517 VSIMNNDQFLVSHWNSN--------ISTLITTI 541 DUF229: domain 1 of 1, from 502 to 935: score -298.2, E = 7.5 *->sifkpnpllkCskdkllttktfnitigtlrlnidaelakarlnvesl + f++n + +++ + ++ + + ++l+ + + Candida_al 502 FDFHENLEIINHSSEVSIMNN-D---QFLVSHWN------------- 531 enlnCeYkreikRkddsdnhysysklfplpkkltqsvkvpvgiiegevef +n++ + ++ik ++ d ++++ k++ + + ++++v+v+v+ +e+ Candida_al 532 SNISTLI-TTIKPFKSVDLDINKFKFDFEISSIDNNVLVKVN---SNDEY 577 iiteCwrdfgkivr.................................... i ++ +d+++++ + ++ + + + ++ ++ ++ +++ ++++++ Candida_al 578 IYITMINDNQELINmvmnlpnlnisiidahqmgniinkllnrdytdndge 627 ......k.vlqkDvfsflhdelRlrippksgnarvktnsstpkekdkpSV ++++ ++ + Dv+++l+ ++ +n++++ d +S+ Candida_al 628 kepdlfIeGNVYDVYGNLPI---WKNNNN-------NNKQRK-LIDHLSI 666 lilGiDSlSrmnfrRsMPrtykfleselgwfelqGYNKVGDNTfpNL.lp + ++P+ ++ +e ++ + l +T NL++ Candida_al 667 PLM------------KLPK-LSTME-SFPAYTL--------DTLSNLtIT 694 lLtGkllEavkkkrfseqeleevcdgdpskegslDkcpF....IWKdFkd + +l+E +k + + +l+ +++++ +++lD+ + ++ IW+ Fk+ Candida_al 695 ITNLYLIESTIRKLELSIDLT--IYNPTNFNINLDSSILidsiIWQIFKN 742 aYGYaTafAEDwagigtFnYlpfkpGFrkqPtDhYlRPlllavEkhlkyr ++ + + ++ Candida_al 743 D------------SLISSIKV-------------------------SIPD 755 trfglnlmkyClgrrptheyllDylrqFlpryrdspdipfFgffWsnsls t++g+ ++g ++ + + + ++ Candida_al 756 TKGGN-----GNGNENGN---------------GNL----------FIPI 775 HddfnyasalDedllkyLkkleerGlldntivifmSDHGlRfGklrrts. +d+fn + + l+y ++++l+n+i f S+ + ++ + Candida_al 776 QDYFNTTMKINIYSLNY----RDKSILENSISSFISN--DNLSNITVAPv 819 IpqGrlEERlPlmsislPpwlRNtekyPqaveNLelNa.nrLttpFDlHa Ip+ + ++Plm + lP l N q++ N N++ +L+ ++ +H Candida_al 820 IPIIH---SNPLMELLLPIELTNITINSQILTNGIINFpEKLIQNIQIHL 866 TLkhilnlselsdkellprtkaldcipkalprgiSLFlPiPdngRtCsdA l+++ +e+ + ++ + S +l+i Candida_al 867 -------LTSQIQFEIYN--PIINS---------SIILYIYTG------- 891 gIpehwCtCesykevstndtkekalirriAesvVeriNeylkplnteeEl + + + +t+ + + ++ V ++ +l++ Candida_al 892 ---------LAKTNTTTDGS---GDGDGDGDGDVIELGHLLHQ------- 922 lsplCapLeLnkVl<-* + l p+++n ++ Candida_al 923 -ERLIIPFSQNGQN 935 //